BLASTX nr result

ID: Coptis24_contig00023823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023823
         (1168 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subuni...   610   e-172
ref|XP_002530149.1| cell division cycle, putative [Ricinus commu...   606   e-171
ref|XP_002523647.1| cell division cycle, putative [Ricinus commu...   600   e-169
ref|XP_003527204.1| PREDICTED: anaphase-promoting complex subuni...   595   e-168
ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subuni...   594   e-167

>ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subunit 6 [Vitis vinifera]
            gi|302142883|emb|CBI20178.3| unnamed protein product
            [Vitis vinifera]
          Length = 545

 Score =  610 bits (1572), Expect = e-172
 Identities = 300/377 (79%), Positives = 321/377 (85%)
 Frame = +1

Query: 37   MREESIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTSDPADIYMQAQALFLGRHYRRAFH 216
            MREE IEKLRGVVRDC+SKHLYSSAIFFADKVAAFTSDPADIYMQAQALFLGRHYRRAFH
Sbjct: 1    MREEEIEKLRGVVRDCLSKHLYSSAIFFADKVAAFTSDPADIYMQAQALFLGRHYRRAFH 60

Query: 217  LLNASQIVLRDLRFRYLAAKCLEELKEWDQCLVMLGDAKVDEYGNAIGLKDSNVMYLDKD 396
            LLNASQIVLRDLRFRYLAAKCLEE KEWDQCL+MLGDAKVDE+GN    KD NVMYLDK+
Sbjct: 61   LLNASQIVLRDLRFRYLAAKCLEEQKEWDQCLLMLGDAKVDEHGNVNDTKDCNVMYLDKE 120

Query: 397  GEDREINITSAICFLRGKXXXXXXXXXXXXKWYKAAIKADPLCYEALERLIENHMXXXXX 576
            GEDREINI+SAICFLRGK             WYKAAIKADPLCYEALE LIENHM     
Sbjct: 121  GEDREINISSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLTSEE 180

Query: 577  XXXXXXXXXFAPEDKWLSSFYSCLIKKYDKESMVEAKFRKLEQETCDNNTASLPVACTLK 756
                     FAPED WLSSFYSCLIKKYDKE++VEAKF +LE+++C+ N +     CTLK
Sbjct: 181  EASLLSSLQFAPEDGWLSSFYSCLIKKYDKETVVEAKFTELEKQSCNINPSDPSFICTLK 240

Query: 757  NNTDLLACKAEYYHQSGEYQKCFELTSALLERDPFHLKSTLVHLTAAMELGHSNELYLMA 936
            NNTDLLACKAEYYHQ GEYQKCFELT+ LLE+DPFH+K TLVHL AAMELGHSNELYLMA
Sbjct: 241  NNTDLLACKAEYYHQCGEYQKCFELTAILLEKDPFHMKCTLVHLAAAMELGHSNELYLMA 300

Query: 937  CNLVKDYPQKALSWFAVGCYYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEE 1116
            CNLVKDYPQKALSWFAVGCYYYCIKKY +SRR+FSKA  LDGTF PA IG GNA+AAQEE
Sbjct: 301  CNLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFSKAANLDGTFPPALIGCGNAYAAQEE 360

Query: 1117 GDQAMSSFRTAARSFPG 1167
            GDQAM ++RTAAR FPG
Sbjct: 361  GDQAMLAYRTAARLFPG 377


>ref|XP_002530149.1| cell division cycle, putative [Ricinus communis]
            gi|223530348|gb|EEF32241.1| cell division cycle, putative
            [Ricinus communis]
          Length = 469

 Score =  606 bits (1562), Expect = e-171
 Identities = 293/377 (77%), Positives = 324/377 (85%)
 Frame = +1

Query: 37   MREESIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTSDPADIYMQAQALFLGRHYRRAFH 216
            MREE IEKLRGVVRDCVSKHLYSSAIFFADKVA FT+DPADIYMQAQALFLGRH+RRAFH
Sbjct: 1    MREEQIEKLRGVVRDCVSKHLYSSAIFFADKVATFTNDPADIYMQAQALFLGRHFRRAFH 60

Query: 217  LLNASQIVLRDLRFRYLAAKCLEELKEWDQCLVMLGDAKVDEYGNAIGLKDSNVMYLDKD 396
            LLNAS+IVLRDLRFRYLAAKCLEELKEWDQCL+MLGDAKVDE+GN    K+ NV+YLDKD
Sbjct: 61   LLNASKIVLRDLRFRYLAAKCLEELKEWDQCLLMLGDAKVDEHGNVFDTKECNVIYLDKD 120

Query: 397  GEDREINITSAICFLRGKXXXXXXXXXXXXKWYKAAIKADPLCYEALERLIENHMXXXXX 576
            GEDREINI+SAICFLRG+            +WYKAAIKADPLCYEALE L+ENHM     
Sbjct: 121  GEDREINISSAICFLRGRAYEALENRSQARQWYKAAIKADPLCYEALECLVENHMLTCEE 180

Query: 577  XXXXXXXXXFAPEDKWLSSFYSCLIKKYDKESMVEAKFRKLEQETCDNNTASLPVACTLK 756
                     F PED+WLS FYSCL+KKYDKES++EAKF++LE+E+ + N +S     TLK
Sbjct: 181  ETSLLSTLQFGPEDEWLSLFYSCLVKKYDKESIIEAKFKELEKESENGNPSSTSFMHTLK 240

Query: 757  NNTDLLACKAEYYHQSGEYQKCFELTSALLERDPFHLKSTLVHLTAAMELGHSNELYLMA 936
             +TDLLACKAEYYHQ GEY KCFELTS LLE+DPFHLK TLVHL AAMELG+SNELYLMA
Sbjct: 241  KDTDLLACKAEYYHQCGEYNKCFELTSILLEKDPFHLKCTLVHLAAAMELGNSNELYLMA 300

Query: 937  CNLVKDYPQKALSWFAVGCYYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEE 1116
            CNLVKDYPQKALSWFAVGCYYYCIKKY +SRR+FSKAT+LDGTF PAWIG+GNA+AAQEE
Sbjct: 301  CNLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFAPAWIGYGNAYAAQEE 360

Query: 1117 GDQAMSSFRTAARSFPG 1167
            GDQAMS++RTAAR FPG
Sbjct: 361  GDQAMSAYRTAARLFPG 377


>ref|XP_002523647.1| cell division cycle, putative [Ricinus communis]
            gi|223537099|gb|EEF38733.1| cell division cycle, putative
            [Ricinus communis]
          Length = 655

 Score =  600 bits (1546), Expect = e-169
 Identities = 292/377 (77%), Positives = 322/377 (85%)
 Frame = +1

Query: 37   MREESIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTSDPADIYMQAQALFLGRHYRRAFH 216
            MREE IEKLRGVVRDCVSKHLYSSAIFFADKVA FT+DPADIYMQAQALFLGRHYRRAFH
Sbjct: 1    MREEQIEKLRGVVRDCVSKHLYSSAIFFADKVATFTNDPADIYMQAQALFLGRHYRRAFH 60

Query: 217  LLNASQIVLRDLRFRYLAAKCLEELKEWDQCLVMLGDAKVDEYGNAIGLKDSNVMYLDKD 396
            LLNAS+IVLRDLRFRYLAAKCLEELKEWDQCL+MLGDAKVDE+GN    K+ NVMYLDKD
Sbjct: 61   LLNASKIVLRDLRFRYLAAKCLEELKEWDQCLLMLGDAKVDEHGNVFDTKECNVMYLDKD 120

Query: 397  GEDREINITSAICFLRGKXXXXXXXXXXXXKWYKAAIKADPLCYEALERLIENHMXXXXX 576
            GEDREINI+SAICFLRG+            +WYKAAIKADPL YEALE L+ENHM     
Sbjct: 121  GEDREINISSAICFLRGRAYEALENRSQARQWYKAAIKADPLGYEALECLVENHMLTCEE 180

Query: 577  XXXXXXXXXFAPEDKWLSSFYSCLIKKYDKESMVEAKFRKLEQETCDNNTASLPVACTLK 756
                     F PED+WLS FYSCL+KKYDKES++EAKF++LE+E+ + N +S     TLK
Sbjct: 181  ETSLLSTLQFGPEDEWLSLFYSCLVKKYDKESIIEAKFKELEKESENGNPSSASFMHTLK 240

Query: 757  NNTDLLACKAEYYHQSGEYQKCFELTSALLERDPFHLKSTLVHLTAAMELGHSNELYLMA 936
             +TDLLACKAEYYHQ GEY KCFELTS LLE+DPFHLK TLVHL AAMELG+SNELYLMA
Sbjct: 241  KDTDLLACKAEYYHQCGEYNKCFELTSILLEKDPFHLKCTLVHLAAAMELGNSNELYLMA 300

Query: 937  CNLVKDYPQKALSWFAVGCYYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEE 1116
            CNLVKDYPQKALSWFAVGCYY CIKKY ++RR+FSKAT+LDGTF PAWIG+GNA+AAQEE
Sbjct: 301  CNLVKDYPQKALSWFAVGCYYCCIKKYDQARRYFSKATSLDGTFAPAWIGYGNAYAAQEE 360

Query: 1117 GDQAMSSFRTAARSFPG 1167
            GDQAMS++RTAAR FPG
Sbjct: 361  GDQAMSAYRTAARLFPG 377


>ref|XP_003527204.1| PREDICTED: anaphase-promoting complex subunit 6-like [Glycine max]
          Length = 545

 Score =  595 bits (1534), Expect = e-168
 Identities = 293/377 (77%), Positives = 319/377 (84%)
 Frame = +1

Query: 37   MREESIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTSDPADIYMQAQALFLGRHYRRAFH 216
            MREE +EKLRGVVRDCVSKHLYSSAIFFADKVAAFT+DPADIYMQAQALFLGRHYRRAFH
Sbjct: 1    MREEEMEKLRGVVRDCVSKHLYSSAIFFADKVAAFTADPADIYMQAQALFLGRHYRRAFH 60

Query: 217  LLNASQIVLRDLRFRYLAAKCLEELKEWDQCLVMLGDAKVDEYGNAIGLKDSNVMYLDKD 396
            LLNAS+IVL DLRFRYLAAKCLEELKEWDQCL MLG+AKVD+ GN   +KDSNVMYLDKD
Sbjct: 61   LLNASKIVLTDLRFRYLAAKCLEELKEWDQCLSMLGEAKVDDDGNVYDMKDSNVMYLDKD 120

Query: 397  GEDREINITSAICFLRGKXXXXXXXXXXXXKWYKAAIKADPLCYEALERLIENHMXXXXX 576
             EDREINI+SAICFLRGK             WYKAAIKADPLCYEALE LIENHM     
Sbjct: 121  CEDREINISSAICFLRGKAYEALENRAQARMWYKAAIKADPLCYEALECLIENHMLTCEE 180

Query: 577  XXXXXXXXXFAPEDKWLSSFYSCLIKKYDKESMVEAKFRKLEQETCDNNTASLPVACTLK 756
                     F  ED WLSSFYSCLIKKYDKE++V AKFR LE E+C ++ +      TLK
Sbjct: 181  EANLISSLQFGSEDGWLSSFYSCLIKKYDKENIVVAKFRDLENESCKSDQSDSSFLRTLK 240

Query: 757  NNTDLLACKAEYYHQSGEYQKCFELTSALLERDPFHLKSTLVHLTAAMELGHSNELYLMA 936
            +NTDLLACKAEYYHQ GEYQKCFELT+ LLE+D FHLK+TLVHL AA+ELGHSNELYLM+
Sbjct: 241  SNTDLLACKAEYYHQCGEYQKCFELTNDLLEKDLFHLKTTLVHLAAAVELGHSNELYLMS 300

Query: 937  CNLVKDYPQKALSWFAVGCYYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQEE 1116
            CNLVKDYPQ ALSWFAVGCYYYCIKKY +SRR+FSKAT+LDGTF PAWIG+GNA+AAQEE
Sbjct: 301  CNLVKDYPQMALSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFPPAWIGYGNAYAAQEE 360

Query: 1117 GDQAMSSFRTAARSFPG 1167
            GDQAMS++RTAAR FPG
Sbjct: 361  GDQAMSAYRTAARLFPG 377


>ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subunit 6-like [Cucumis
            sativus]
          Length = 547

 Score =  594 bits (1531), Expect = e-167
 Identities = 289/378 (76%), Positives = 317/378 (83%)
 Frame = +1

Query: 34   KMREESIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTSDPADIYMQAQALFLGRHYRRAF 213
            +MREE IEKLRGVVRDC+SKHLYSSAIFFADKV AFT DPADIYMQAQALFLGRH+RRAF
Sbjct: 2    RMREEEIEKLRGVVRDCLSKHLYSSAIFFADKVTAFTEDPADIYMQAQALFLGRHFRRAF 61

Query: 214  HLLNASQIVLRDLRFRYLAAKCLEELKEWDQCLVMLGDAKVDEYGNAIGLKDSNVMYLDK 393
            HLLNAS+IVLRD RFRYLAAKCLEELKEWDQCL MLGDA VDE+GN +  KD + MYLDK
Sbjct: 62   HLLNASKIVLRDPRFRYLAAKCLEELKEWDQCLAMLGDANVDEHGNVLDNKDHSGMYLDK 121

Query: 394  DGEDREINITSAICFLRGKXXXXXXXXXXXXKWYKAAIKADPLCYEALERLIENHMXXXX 573
            D EDREINI +A CFLRGK             WYKAAIKADPLCYEALE LIE+HM    
Sbjct: 122  DCEDREINIVAATCFLRGKAYEALENRTQARLWYKAAIKADPLCYEALECLIESHMLTCD 181

Query: 574  XXXXXXXXXXFAPEDKWLSSFYSCLIKKYDKESMVEAKFRKLEQETCDNNTASLPVACTL 753
                      F PED WL SFY+CLIKKYDKE+++EA+F++LE+ET ++ ++      TL
Sbjct: 182  EESSLLSSLQFGPEDGWLPSFYACLIKKYDKENIIEARFKELERETFNSKSSDPSFMRTL 241

Query: 754  KNNTDLLACKAEYYHQSGEYQKCFELTSALLERDPFHLKSTLVHLTAAMELGHSNELYLM 933
            K NTDLLACKAEYYHQ GEYQKCFELTS LLE+DPFHLKSTLVHL AAMELGHSNELYLM
Sbjct: 242  KTNTDLLACKAEYYHQCGEYQKCFELTSVLLEKDPFHLKSTLVHLAAAMELGHSNELYLM 301

Query: 934  ACNLVKDYPQKALSWFAVGCYYYCIKKYGESRRFFSKATTLDGTFLPAWIGHGNAFAAQE 1113
            ACNLVKDYPQKALSWFAVGCYYYCIKKY +SRR+FSKATTLDGTF PAWIG+GNA+AAQE
Sbjct: 302  ACNLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFSKATTLDGTFAPAWIGYGNAYAAQE 361

Query: 1114 EGDQAMSSFRTAARSFPG 1167
            EGDQAMS++RT AR FPG
Sbjct: 362  EGDQAMSAYRTGARLFPG 379


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