BLASTX nr result

ID: Coptis24_contig00023820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023820
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169395.1| PREDICTED: tubulin-specific chaperone B-like...   156   2e-36
ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like...   156   2e-36
ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isof...   155   4e-36
ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isof...   155   4e-36
ref|XP_002529160.1| tubulin-specific chaperone B, putative [Rici...   146   2e-33

>ref|XP_004169395.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 126

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/98 (74%), Positives = 89/98 (90%)
 Frame = +2

Query: 2   ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPVESIKDKLWKKTGTSVDSMCLELY 181
           A+RLQ +  D+SVLLRVTH+NLK+F++DVRFSLQ  VES+K+KLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELY 61

Query: 182 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSV 295
           DD+G+K+SDL+DN  PLGFYSP DGYR+HIIDLDPSSV
Sbjct: 62  DDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSV 99


>ref|XP_004142648.1| PREDICTED: tubulin-specific chaperone B-like [Cucumis sativus]
          Length = 245

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/98 (74%), Positives = 89/98 (90%)
 Frame = +2

Query: 2   ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPVESIKDKLWKKTGTSVDSMCLELY 181
           A+RLQ +  D+SVLLRVTH+NLK+F++DVRFSLQ  VES+K+KLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLELY 61

Query: 182 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSV 295
           DD+G+K+SDL+DN  PLGFYSP DGYR+HIIDLDPSSV
Sbjct: 62  DDSGSKISDLTDNCIPLGFYSPLDGYRLHIIDLDPSSV 99


>ref|XP_002274425.1| PREDICTED: tubulin-specific chaperone B isoform 2 [Vitis vinifera]
          Length = 243

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/98 (76%), Positives = 87/98 (88%)
 Frame = +2

Query: 2   ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPVESIKDKLWKKTGTSVDSMCLELY 181
           A+RLQ +  D+SV LRVTH N+K+FSADVRFSLQ  VES+KDKLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQ-IQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 182 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSV 295
           DD GAK+S LSDNL+PLGFYSP DGYR+H+IDLDPSSV
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSV 98


>ref|XP_002274343.1| PREDICTED: tubulin-specific chaperone B isoform 1 [Vitis vinifera]
           gi|359482231|ref|XP_003632738.1| PREDICTED:
           tubulin-specific chaperone B [Vitis vinifera]
           gi|297739921|emb|CBI30103.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  155 bits (391), Expect = 4e-36
 Identities = 75/98 (76%), Positives = 87/98 (88%)
 Frame = +2

Query: 2   ANRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPVESIKDKLWKKTGTSVDSMCLELY 181
           A+RLQ +  D+SV LRVTH N+K+FSADVRFSLQ  VES+KDKLW+K GTSV+SMCLELY
Sbjct: 2   ASRLQ-IQEDESVSLRVTHGNIKSFSADVRFSLQMTVESVKDKLWRKCGTSVNSMCLELY 60

Query: 182 DDAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSV 295
           DD GAK+S LSDNL+PLGFYSP DGYR+H+IDLDPSSV
Sbjct: 61  DDTGAKISVLSDNLRPLGFYSPQDGYRLHVIDLDPSSV 98


>ref|XP_002529160.1| tubulin-specific chaperone B, putative [Ricinus communis]
           gi|223531384|gb|EEF33219.1| tubulin-specific chaperone
           B, putative [Ricinus communis]
          Length = 243

 Score =  146 bits (369), Expect = 2e-33
 Identities = 66/97 (68%), Positives = 86/97 (88%)
 Frame = +2

Query: 5   NRLQNVPVDDSVLLRVTHSNLKTFSADVRFSLQAPVESIKDKLWKKTGTSVDSMCLELYD 184
           ++LQ +  D+SV+LR+THSNLKTFSADVRFSL++ VES+K+KLW+K GTSV+SM L+LYD
Sbjct: 3   SKLQKIEGDESVVLRITHSNLKTFSADVRFSLESTVESVKEKLWRKCGTSVNSMTLQLYD 62

Query: 185 DAGAKVSDLSDNLKPLGFYSPHDGYRVHIIDLDPSSV 295
           D  +K+ DLSD+ +PLGFYSP DGYR+H+ID+DPSSV
Sbjct: 63  DTNSKICDLSDDSRPLGFYSPLDGYRIHVIDVDPSSV 99


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