BLASTX nr result

ID: Coptis24_contig00023787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023787
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...   113   2e-23
ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812...    77   1e-12
ref|XP_001756250.1| predicted protein [Physcomitrella patens sub...    65   7e-09
ref|XP_001758752.1| histone-lysine N-methyltransferase-like prot...    64   1e-08

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
 Frame = +3

Query: 3   VSKFCEHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYGIRVPDDNNGWEWPEKIPATVG 182
           VSKFCEHS    VNPGDAVR+ SGETIAQWR+ YF K+GIRVP+D +GW+WPE I AT G
Sbjct: 289 VSKFCEHSELRDVNPGDAVRMDSGETIAQWRKQYFQKFGIRVPEDQSGWDWPEGISATAG 348

Query: 183 LVNYEATLPNISKNSDMFKVV---DPFILSERPGHHWNTIVSADSSHMGESVNRKTFRDV 353
            +    T+P++ K SD+  +V      +  E+P   W+ +V   +   G++    +  DV
Sbjct: 349 FLKSSVTVPSLYKKSDLSHLVGSSGDLLRFEQP---WDNVVFPKNPRTGQN----SVNDV 401

Query: 354 VHDGQQRNFQD 386
           +H+ Q  N  D
Sbjct: 402 LHNKQWGNGSD 412


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
           gi|223540952|gb|EEF42510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 903

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/129 (42%), Positives = 77/129 (59%)
 Frame = +3

Query: 3   VSKFCEHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYGIRVPDDNNGWEWPEKIPATVG 182
           VSKFCEHSG   +NPGDA+ + SGETIAQWR++YF K+GIRVP+D +GW+WPE +P    
Sbjct: 271 VSKFCEHSGLWNINPGDAIHMDSGETIAQWRKLYFQKFGIRVPEDQSGWDWPEGLPLAAS 330

Query: 183 LVNYEATLPNISKNSDMFKVVDPFILSERPGHHWNTIVSADSSHMGESVNRKTFRDVVHD 362
           L+    ++ ++ K +    +V P     R G        +D+       ++    D +HD
Sbjct: 331 LMRSGVSMSSMPKKTACINLVAPSEALARSGR-----PLSDAVVKNFLADQNPVIDALHD 385

Query: 363 GQQRNFQDG 389
            QQRN QDG
Sbjct: 386 EQQRNGQDG 394


>ref|XP_003545448.1| PREDICTED: uncharacterized protein LOC100812602 [Glycine max]
          Length = 1985

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/75 (44%), Positives = 53/75 (70%)
 Frame = +3

Query: 3   VSKFCEHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYGIRVPDDNNGWEWPEKIPATVG 182
           V KFCEHSG   ++PG+AVR++SGETI+QW+++YF K+GIR   + N W+WP+ +     
Sbjct: 214 VLKFCEHSGLHGIDPGEAVRMESGETISQWQKLYFLKFGIRSLGNENEWDWPDVLSTRGS 273

Query: 183 LVNYEATLPNISKNS 227
           L+   ++  ++SK +
Sbjct: 274 LMRSNSSAFDMSKTN 288


>ref|XP_001756250.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162692760|gb|EDQ79116.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 605

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = +3

Query: 9   KFCEHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYGIRVPDDNNGWEWPEKIPATVGLV 188
           +F  HSG  + NPG AV ++ GE + QWR+++F ++G++VP+DN GWEW        G  
Sbjct: 283 EFEVHSGLNVSNPGLAVFMEGGENLVQWRKLFFSQFGVKVPEDNVGWEWQNSGSVETGHG 342

Query: 189 NYEATLP 209
            Y+   P
Sbjct: 343 KYKDVGP 349


>ref|XP_001758752.1| histone-lysine N-methyltransferase-like protein [Physcomitrella
           patens subsp. patens] gi|162689889|gb|EDQ76258.1|
           histone-lysine N-methyltransferase-like protein
           [Physcomitrella patens subsp. patens]
          Length = 2373

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = +3

Query: 3   VSKFCEHSGSCIVNPGDAVRLKSGETIAQWRRIYFPKYGIRVPDDNNGWEW 155
           V  F +H G    NPG+ V ++ GET+ QWR+ +F +YG+ VP+DN GW+W
Sbjct: 342 VRSFTQHLGINAGNPGEVVFMEGGETLVQWRKSFFSQYGVNVPEDNVGWDW 392


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