BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023779
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   392   e-107
ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   392   e-107
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,...   370   e-100
ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago ...   359   8e-97

>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  392 bits (1007), Expect = e-107
 Identities = 199/297 (67%), Positives = 241/297 (81%)
 Frame = -1

Query: 891 LCNKILDGCPDVLTLKKLHAQVLVIDHLHSNPSIGIKLMRAYSSFGEPKTTRKVFDEIPA 712
           LC +ILD  PD+  LKKLH+++ +   LHSNPS+GIKLMRAY+  GEP +TR +FDEIP 
Sbjct: 40  LCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK 99

Query: 711 ADNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGL 532
              N+VFFNVMIRSYVNN +Y +ALLV+ NM  +G+ PD+YT+PCVLKA S SE+L VG+
Sbjct: 100 --KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGM 157

Query: 531 QIHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKG 352
           QIHAA+VR GLD N+FVGNGLI+MYGKC  L +A RVLD M  RDVVSWNS+VAG A+ G
Sbjct: 158 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNG 217

Query: 351 RFDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVM 172
           +FDDALEVCKEME   +KP+AGTMASL PAVTNT   NV FV+EMF K+A K LVS+NVM
Sbjct: 218 QFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVM 277

Query: 171 IAICVNNSLPTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELGKRIHEYVVR 1
           IA+ +NNS+P EAV+IF Q+E   ++PD ++IASVLPACGDLSAL LG+RIHEYVVR
Sbjct: 278 IAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVR 334



 Score =  105 bits (261), Expect = 3e-20
 Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
 Frame = -1

Query: 711 ADNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGL 532
           A+ ++V +NVMI  Y+NN M  EA+ +++ M  + + PD  +   VL AC     L +G 
Sbjct: 267 ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 326

Query: 531 QIHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKG 352
           +IH  +VR  L  NL + N LI MY KC  L  AR V D M+ RDVVSW SM++ +   G
Sbjct: 327 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 386

Query: 351 RFDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVM 172
           +  DA+ +   M+   + P++    S+  A ++    +    R  F  M  +  +   + 
Sbjct: 387 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEG--RYYFKLMTEECKIVPRIE 444

Query: 171 IAICVNNSL--PTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELG 28
             +C+ + L    +  E +  I+   +EP+     ++L AC   S + +G
Sbjct: 445 HFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIG 494


>ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|222871435|gb|EEF08566.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  392 bits (1007), Expect = e-107
 Identities = 193/297 (64%), Positives = 239/297 (80%)
 Frame = -1

Query: 891 LCNKILDGCPDVLTLKKLHAQVLVIDHLHSNPSIGIKLMRAYSSFGEPKTTRKVFDEIPA 712
           LCNKILD  PD  TLKKLH+++L+  +LH NPS+GIKLMRAY++ GEP  TR +FDEI  
Sbjct: 40  LCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEI-- 97

Query: 711 ADNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGL 532
            D N+VFFNVMIRSYVNN +Y +ALLV+  M   G  PDNYT+PCVLKACSVS NL VGL
Sbjct: 98  TDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGL 157

Query: 531 QIHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKG 352
           QIH A+V+ GLD NL++GNGL++MYGKC  L  ARRVLD M  RD+VSWNSMVAG+AQ G
Sbjct: 158 QIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNG 217

Query: 351 RFDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVM 172
           RF+DAL++C+EME   +KP+AGTM SL PAVTNTS  NV +V++MF K+  K L+S+NVM
Sbjct: 218 RFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVM 277

Query: 171 IAICVNNSLPTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELGKRIHEYVVR 1
           IA+ VNN++P EAV+++ Q++  G+EPD V+I+SVLPACGDLSA  LG+RIHEYV R
Sbjct: 278 IAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVER 334



 Score =  107 bits (268), Expect = 4e-21
 Identities = 75/230 (32%), Positives = 114/230 (49%), Gaps = 4/230 (1%)
 Frame = -1

Query: 708 DNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGLQ 529
           + +++ +NVMI  YVNN M  EA+ +Y+ M  +G+ PD  +   VL AC       +G +
Sbjct: 268 EKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRR 327

Query: 528 IHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKGR 349
           IH  + R  L  NL + N LI MY KC  L +AR V D M  RDVVSW SM++ +   G+
Sbjct: 328 IHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQ 387

Query: 348 FDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMA----MKELVSY 181
             DA+ + K+M      P+     S+  A ++  +  V   R  FN MA       +  Y
Sbjct: 388 GKDAVALFKKMRDSGFTPDWIAFVSVLAACSH--AGLVDEGRYCFNLMAEYGITPGIEHY 445

Query: 180 NVMIAICVNNSLPTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALEL 31
           N M+ +        EA  +  Q+    +EP+     S+L AC   S++ +
Sbjct: 446 NCMVDLLGRAGKIDEAYHLTRQMP---MEPNERVWGSLLSACRVYSSMNI 492


>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  392 bits (1007), Expect = e-107
 Identities = 199/297 (67%), Positives = 241/297 (81%)
 Frame = -1

Query: 891  LCNKILDGCPDVLTLKKLHAQVLVIDHLHSNPSIGIKLMRAYSSFGEPKTTRKVFDEIPA 712
            LC +ILD  PD+  LKKLH+++ +   LHSNPS+GIKLMRAY+  GEP +TR +FDEIP 
Sbjct: 1029 LCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK 1088

Query: 711  ADNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGL 532
               N+VFFNVMIRSYVNN +Y +ALLV+ NM  +G+ PD+YT+PCVLKA S SE+L VG+
Sbjct: 1089 --KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGM 1146

Query: 531  QIHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKG 352
            QIHAA+VR GLD N+FVGNGLI+MYGKC  L +A RVLD M  RDVVSWNS+VAG A+ G
Sbjct: 1147 QIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNG 1206

Query: 351  RFDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVM 172
            +FDDALEVCKEME   +KP+AGTMASL PAVTNT   NV FV+EMF K+A K LVS+NVM
Sbjct: 1207 QFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVM 1266

Query: 171  IAICVNNSLPTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELGKRIHEYVVR 1
            IA+ +NNS+P EAV+IF Q+E   ++PD ++IASVLPACGDLSAL LG+RIHEYVVR
Sbjct: 1267 IAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVR 1323



 Score =  105 bits (261), Expect = 3e-20
 Identities = 70/230 (30%), Positives = 116/230 (50%), Gaps = 2/230 (0%)
 Frame = -1

Query: 711  ADNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGL 532
            A+ ++V +NVMI  Y+NN M  EA+ +++ M  + + PD  +   VL AC     L +G 
Sbjct: 1256 ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGR 1315

Query: 531  QIHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKG 352
            +IH  +VR  L  NL + N LI MY KC  L  AR V D M+ RDVVSW SM++ +   G
Sbjct: 1316 RIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNG 1375

Query: 351  RFDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVM 172
            +  DA+ +   M+   + P++    S+  A ++    +    R  F  M  +  +   + 
Sbjct: 1376 KGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEG--RYYFKLMTEECKIVPRIE 1433

Query: 171  IAICVNNSL--PTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELG 28
              +C+ + L    +  E +  I+   +EP+     ++L AC   S + +G
Sbjct: 1434 HFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIG 1483


>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score =  370 bits (951), Expect = e-100
 Identities = 186/297 (62%), Positives = 234/297 (78%)
 Frame = -1

Query: 891 LCNKILDGCPDVLTLKKLHAQVLVIDHLHSNPSIGIKLMRAYSSFGEPKTTRKVFDEIPA 712
           LCN+ILD  PD+ TLKKLH +VL   +L  NPS+GIKLMR Y++ GEP   R +FDEI  
Sbjct: 23  LCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEI-- 80

Query: 711 ADNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGL 532
            D N+VFFNVMIRSYVNN +Y +ALLVY  M+  G VPD YT+PCVLKA S S++L VGL
Sbjct: 81  TDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGL 140

Query: 531 QIHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKG 352
           QIH A+++ GLD NL+VGNGLIAMYGKC  L +A++VLD +  RDVVSWNSMV+ +AQ G
Sbjct: 141 QIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNG 200

Query: 351 RFDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVM 172
           RF+DALE+C+EME   +KPN  TMASL PAVTNT+S NV +V+EMF K+  K ++S+NVM
Sbjct: 201 RFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWNVM 260

Query: 171 IAICVNNSLPTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELGKRIHEYVVR 1
           IA+ VNNS+P EAV ++SQ+E+ G+EPD V+I SVLPA GDLSAL LG+R+H++  R
Sbjct: 261 IAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAER 317



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 75/227 (33%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
 Frame = -1

Query: 702 NIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGLQIH 523
           +++ +NVMI  YVNN M  EA+++Y  M   G+ PD  +   VL A      L +G ++H
Sbjct: 253 SVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVH 312

Query: 522 AAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKGRFD 343
               R  L  NL + N LI MY KC  L DAR V + M+ RDVVSW S+++ + + G+  
Sbjct: 313 KFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGR 372

Query: 342 DALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVMIAI 163
           DA+ V  EM    + P++    S+  A ++  +  +   R  FN MA   +       A 
Sbjct: 373 DAVAVFAEMRNSGLNPDSIAFVSVLAACSH--AGLLDDGRYYFNLMAECGITPKLEHFA- 429

Query: 162 CVNNSL--PTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELG 28
           CV + L    +  E +  I    LEPD      +L AC   S + +G
Sbjct: 430 CVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIG 476


>ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
           gi|355522693|gb|AET03147.1| hypothetical protein
           MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  359 bits (921), Expect = 8e-97
 Identities = 182/295 (61%), Positives = 223/295 (75%)
 Frame = -1

Query: 891 LCNKILDGCPDVLTLKKLHAQVLVIDHLHSNPSIGIKLMRAYSSFGEPKTTRKVFDEIPA 712
           L  K LD  PD+ TLKKLH  +  ++  H NPS+GIKLMR+Y++ GEP  TRKVFDE+  
Sbjct: 23  LLAKALDQNPDIKTLKKLHTMIFYLNS-HQNPSLGIKLMRSYAACGEPGLTRKVFDEM-- 79

Query: 711 ADNNIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGL 532
           +D N+VF+NVMIRSYVNN  Y + LLV+  M   G  PDNYT+PCVLKACS SENL+ GL
Sbjct: 80  SDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGL 139

Query: 531 QIHAAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKG 352
            IH  +++ GLDFNLFVGNGLIAMYGKC  L +ARRV D M  +DVVSWNSMVAG+A   
Sbjct: 140 LIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNM 199

Query: 351 RFDDALEVCKEMETQLVKPNAGTMASLFPAVTNTSSANVQFVREMFNKMAMKELVSYNVM 172
           RFDDALE+C+EME    KP+  TMASL PAV NTSS NV +V ++F  +  K L+S+NVM
Sbjct: 200 RFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVM 259

Query: 171 IAICVNNSLPTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELGKRIHEYV 7
           I + + NSLPT+AV+++ Q+E   +EPD +T ASVLPACGDLSAL LG+RIHEYV
Sbjct: 260 IRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYV 314



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
 Frame = -1

Query: 702 NIVFFNVMIRSYVNNCMYGEALLVYMNMWRYGLVPDNYTFPCVLKACSVSENLKVGLQIH 523
           N++ +NVMIR Y+ N +  +A+ +Y+ M +  + PD  TF  VL AC     L +G +IH
Sbjct: 252 NLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIH 311

Query: 522 AAIVRAGLDFNLFVGNGLIAMYGKCDRLGDARRVLDGMRQRDVVSWNSMVAGFAQKGRFD 343
             + +  L  NL + N LI MY +C  L DA+RV D M+ RDV SW S+++ +   G+  
Sbjct: 312 EYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGC 371

Query: 342 DALEVCKEMETQLVKPNAGTMASLFPAVTNT---SSANVQFVREMFNKMAMKELVSYNVM 172
           +A+ +  EM      P++    ++  A +++       + F +   +      +  Y  +
Sbjct: 372 NAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACL 431

Query: 171 IAICVNNSLPTEAVEIFSQIESKGLEPDPVTIASVLPACGDLSALELG 28
           + +        EA  I  Q+    +EP+    A++L +C   + +++G
Sbjct: 432 VDLLGRAGRVDEAYNIIKQMP---IEPNERVWATLLSSCRVFTNMDIG 476