BLASTX nr result
ID: Coptis24_contig00023763
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00023763
(1861 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidy... 813 0.0
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct... 810 0.0
ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidy... 807 0.0
ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase... 806 0.0
ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reduct... 803 0.0
>ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
[Ricinus communis] gi|223547949|gb|EEF49441.1|
bifunctional dihydrofolate reductase-thymidylate
synthase, putative [Ricinus communis]
Length = 528
Score = 813 bits (2100), Expect = 0.0
Identities = 389/506 (76%), Positives = 450/506 (88%)
Frame = -1
Query: 1525 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 1346
++ +G +N+ + D PR RTYQV+VAAT MGIGKDGKLPWRLPSDL FFK+VT+TT
Sbjct: 8 NLSNGNANIEQHD----PR--RTYQVVVAATRDMGIGKDGKLPWRLPSDLKFFKDVTLTT 61
Query: 1345 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEI 1166
++ GK NAVIMGRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG ASALE+
Sbjct: 62 TDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVMCGSFASALEL 121
Query: 1165 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 986
LA PYCLSIEKV+VIGGGQI EALNAP C+A+HITEIET+ +CDTF+P+IDS F W
Sbjct: 122 LAASPYCLSIEKVYVIGGGQILREALNAPGCDAVHITEIETSFDCDTFIPAIDSSIFHPW 181
Query: 985 YSSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFE 806
Y SFP+V++NIR+SFATY+R+RSSA ES ++GL+ ++SSE+SKF+++ FSFLPK++F+
Sbjct: 182 YLSFPMVENNIRYSFATYVRVRSSAVESNGHDSGLSSESSSENSKFDVKKFSFLPKMVFD 241
Query: 805 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 626
RHEE+ YL+LVQ+II +G K DRT TGTLSKFGCQ+RFNLRK FPLLTTK+VFWRGVVE
Sbjct: 242 RHEEFLYLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVVE 301
Query: 625 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASY 446
ELLWFISGSTN+KVLQEKGIHIWDGN+SR+YLDSIGL +REEGDLGPVYGFQWRHFGA Y
Sbjct: 302 ELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGARY 361
Query: 445 TNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANG 266
T+MHA+Y GQGFDQLLDVVNKI+N PDDRRI+LSAWNPSDLKLMALPPCHMFAQFYVANG
Sbjct: 362 TDMHADYTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANG 421
Query: 265 ELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLS 86
ELSCQMYQRSADMGLGVPFNIASY LLTC+IAHVCDLVPGDFVHV+GD HVY+ H RPL
Sbjct: 422 ELSCQMYQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRPLQ 481
Query: 85 EQLQKHPKPFPMLKINRLKKDIDSFV 8
EQLQK PKPFP+LKIN KK+IDSFV
Sbjct: 482 EQLQKLPKPFPILKINPEKKNIDSFV 507
>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Vitis vinifera]
Length = 524
Score = 810 bits (2091), Expect = 0.0
Identities = 387/495 (78%), Positives = 440/495 (88%)
Frame = -1
Query: 1492 GDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTTSELGKTNAVIM 1313
G++++ P RTYQV+VAAT MGIGKDGKLPWRLPSD+ FK++TMT ++ K NAVIM
Sbjct: 12 GNANIQPDPQRTYQVVVAATRDMGIGKDGKLPWRLPSDMKIFKDITMTVADTVKKNAVIM 71
Query: 1312 GRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEILAGPPYCLSIE 1133
GRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG +ASALE+LA PYCLSIE
Sbjct: 72 GRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMASALELLAASPYCLSIE 131
Query: 1132 KVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLWYSSFPLVQDNI 953
KVFVIGGGQI EALNAP C+AIHITEIET+ ECDTF+P+IDS F+ WYSSFPLV++NI
Sbjct: 132 KVFVIGGGQILREALNAPGCDAIHITEIETSFECDTFIPAIDSLVFQPWYSSFPLVENNI 191
Query: 952 RHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFERHEEYTYLKLV 773
R+SF TY+R+RSSA ES NG D+ ES KFE++ FSFLPK+IFERHEEY YL+LV
Sbjct: 192 RYSFMTYVRVRSSADESQIQNNG---DSGLESIKFEVKKFSFLPKMIFERHEEYIYLRLV 248
Query: 772 QDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVEELLWFISGSTN 593
+DII NG Q+ DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVVEELLWFISGSTN
Sbjct: 249 EDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFISGSTN 308
Query: 592 SKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASYTNMHANYNGQG 413
+KVLQEKGIHIWDGN+SR+YLDSIGL DREEGDLGP+YGFQWRHFGASY +MHA+Y GQG
Sbjct: 309 AKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHADYTGQG 368
Query: 412 FDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRSA 233
FDQLLDV+NKI+N P+DRRI+LSAWNPSDLKLMALPPCHMFAQFYV++GELSCQMYQRSA
Sbjct: 369 FDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQMYQRSA 428
Query: 232 DMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLSEQLQKHPKPFP 53
DMGLGVPFNIASY+LLTCMIAHVCDLVPGDF+HV+GD+HVY H RPL EQLQK PKPFP
Sbjct: 429 DMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKLPKPFP 488
Query: 52 MLKINRLKKDIDSFV 8
+LKIN KK+IDSFV
Sbjct: 489 ILKINPQKKNIDSFV 503
>ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1706522|sp|P51820.1|DRTS_SOYBN RecName:
Full=Bifunctional dihydrofolate reductase-thymidylate
synthase; Short=DHFR-TS; Includes: RecName:
Full=Dihydrofolate reductase; Includes: RecName:
Full=Thymidylate synthase gi|999190|gb|AAB34317.1|
dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1096144|prf||2111237A dihydrofolate
reductase-thymidylate synthase
Length = 530
Score = 807 bits (2084), Expect = 0.0
Identities = 386/506 (76%), Positives = 435/506 (85%)
Frame = -1
Query: 1525 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 1346
SV+S G + G + P RTYQV+VAAT GIGKDGKLPWRLP+DL FFKE+TM T
Sbjct: 6 SVISNGHS--NGSVNPLPNLQRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKT 63
Query: 1345 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEI 1166
SE GK NA++MGRKTWESIP +YRPL GRLNVVLTR GS +IA+AENVV+CG ++SALE+
Sbjct: 64 SEPGKKNAIVMGRKTWESIPLEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALEL 123
Query: 1165 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 986
LA PY LSIEKVFVIGGGQIF EALN P CEAIH+TEI+++IECDTFMP +D FR W
Sbjct: 124 LAASPYSLSIEKVFVIGGGQIFREALNVPGCEAIHLTEIQSSIECDTFMPPVDFTIFRPW 183
Query: 985 YSSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFE 806
YSSFP V++NIR+SF TY+R+RSSAAES DN+SES KFE+++FSFLPK+I E
Sbjct: 184 YSSFPKVENNIRYSFTTYVRVRSSAAESAGQNIDPLLDNNSESMKFEVKDFSFLPKMISE 243
Query: 805 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 626
RHEEY YLKLVQDII GT K DRT TGTLSKFGCQMRFNLR FPLLTTK+VFWRGVVE
Sbjct: 244 RHEEYLYLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVE 303
Query: 625 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASY 446
ELLWFISGSTN+KVLQEKGIHIWDGN+SREYLD +GL +REEGDLGPVYGFQWRHFGA Y
Sbjct: 304 ELLWFISGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARY 363
Query: 445 TNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANG 266
T+MH +Y+GQGFDQLLDV+NKI+ PDDRRI+LSAWNP DLKLMALPPCHMFAQFYVA+G
Sbjct: 364 TDMHHDYSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHG 423
Query: 265 ELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLS 86
ELSCQMYQRSADMGLG+PFNIASY+LLTCMIAHVCDL+PGDF+HV+GDAH+Y+NH RPL
Sbjct: 424 ELSCQMYQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQ 483
Query: 85 EQLQKHPKPFPMLKINRLKKDIDSFV 8
EQL PKPFP LKIN KKDIDSFV
Sbjct: 484 EQLHNQPKPFPTLKINPKKKDIDSFV 509
>ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
gi|222849082|gb|EEE86629.1| dihydrofolate
reductase-thymidylate synthase [Populus trichocarpa]
Length = 528
Score = 806 bits (2083), Expect = 0.0
Identities = 384/506 (75%), Positives = 444/506 (87%)
Frame = -1
Query: 1525 SVMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 1346
++ +G +N + D PR +TYQV+VAAT MGIGKDGKLPW+LPSDL FFK++T+TT
Sbjct: 8 NLSNGNANTQQSD----PR--KTYQVVVAATKDMGIGKDGKLPWKLPSDLKFFKDLTLTT 61
Query: 1345 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEI 1166
+ GK NAVIMGRKTWESIP ++RPLPGRLNVVLTR GS +IA+AENVV+CG + SALE+
Sbjct: 62 MDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMGSALEL 121
Query: 1165 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 986
LA PYCLSIEKVFVIGGGQI E+LNAP C+AIHITEIET+ +CDTF+P+ID+ F+ W
Sbjct: 122 LAASPYCLSIEKVFVIGGGQILRESLNAPGCDAIHITEIETDFDCDTFIPAIDTSVFQPW 181
Query: 985 YSSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFE 806
YSSFP V+++IRH F TY+R+RSS ES S NG D +SE+SKFE++ FSFLPK++FE
Sbjct: 182 YSSFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKFEVKKFSFLPKMVFE 241
Query: 805 RHEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 626
RHEEY YL++VQDII +G K DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVVE
Sbjct: 242 RHEEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVVE 301
Query: 625 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASY 446
ELLWFISGST++KVLQEKGIHIWDGN+SREYLDSIGL DREEGDLGPVYGFQWRHFGA Y
Sbjct: 302 ELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGARY 361
Query: 445 TNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANG 266
T+MHA+Y GQGFDQLLDV++KI+N P+DRRI++SAWNPSDLKLMALPPCHMFAQFYVANG
Sbjct: 362 TDMHADYTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVANG 421
Query: 265 ELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLS 86
ELSCQMYQRSADMGLGVPFNIASY+LLTC+IAHVCDL+PGDFVHV+GDAHVY H RPL
Sbjct: 422 ELSCQMYQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPLQ 481
Query: 85 EQLQKHPKPFPMLKINRLKKDIDSFV 8
EQL+K PKPFP+LKIN KKDID+FV
Sbjct: 482 EQLRKLPKPFPILKINSEKKDIDTFV 507
>ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Glycine max]
Length = 528
Score = 803 bits (2075), Expect = 0.0
Identities = 380/507 (74%), Positives = 439/507 (86%)
Frame = -1
Query: 1522 VMSGGSNVVKGDSHMGPRTWRTYQVIVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTTS 1343
V+S G+ G+S P RTYQ +V AT MGI KD KLPW LP+DLNFF+E+T TTS
Sbjct: 7 VISNGN----GNSKSEPHPQRTYQAVVVATRDMGISKDEKLPWTLPTDLNFFEEITTTTS 62
Query: 1342 ELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRFGSSNIASAENVVVCGGLASALEIL 1163
+ GK NAV+MGRKTWESIP + RPLPGRLNVVLTR GS +IA+AENV++CG ++SA+E+L
Sbjct: 63 DPGKKNAVVMGRKTWESIPPENRPLPGRLNVVLTRSGSFDIATAENVLICGSVSSAMELL 122
Query: 1162 AGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLWY 983
A PYCLSIEKVF+ GGG+IF EALNAP CEA HITEIE +IECDTFMP +++ F+ WY
Sbjct: 123 ASSPYCLSIEKVFLTGGGEIFREALNAPGCEAAHITEIEASIECDTFMPRVNTSVFQTWY 182
Query: 982 SSFPLVQDNIRHSFATYIRLRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKLIFER 803
SSFPLV+DN+R+SF TY+R+RS ES FDN+S++ KFE++ FSFLPK+++ER
Sbjct: 183 SSFPLVEDNLRYSFTTYVRVRSFPPESPDQNADPFFDNNSDALKFEVKKFSFLPKMVYER 242
Query: 802 HEEYTYLKLVQDIILNGTQKADRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVEE 623
HEE+ YL+LVQ+II GT K DRT TGTLSKFGCQMRFNLR+ FPLLTTK+VFWRGV+EE
Sbjct: 243 HEEFKYLRLVQEIISEGTTKDDRTGTGTLSKFGCQMRFNLRRNFPLLTTKKVFWRGVIEE 302
Query: 622 LLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASYT 443
LLWFISGST++KVLQEKGIHIWDGN+SREYLDSIGL DREEGDLGPVYGFQWRHFGA YT
Sbjct: 303 LLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLTDREEGDLGPVYGFQWRHFGAKYT 362
Query: 442 NMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANGE 263
+MHA+Y+GQGFDQLLDV+NKI++ PDDRRI+LSAWNPSDLKLMALPPCHMFAQFYVANGE
Sbjct: 363 DMHADYSGQGFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGE 422
Query: 262 LSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLSE 83
LSCQMYQRSADMGLGVPFNIASY+LLTCMIAHVCDLVPGDF+HV+GDAHVY+NH RPL E
Sbjct: 423 LSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRPLQE 482
Query: 82 QLQKHPKPFPMLKINRLKKDIDSFVIS 2
QLQ PKPFP+LKIN KKDIDSFV S
Sbjct: 483 QLQNQPKPFPILKINPKKKDIDSFVAS 509