BLASTX nr result

ID: Coptis24_contig00023762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023762
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261...    84   2e-14
ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa ...    83   3e-14
ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260...    80   1e-13
emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]    80   1e-13
ref|XP_002305222.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13

>ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261683 [Vitis vinifera]
           gi|297740496|emb|CBI30678.3| unnamed protein product
           [Vitis vinifera]
          Length = 530

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/87 (50%), Positives = 57/87 (65%)
 Frame = -2

Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86
           +L L+LP+ DIV S E A   C S   V K D V KM+KQG FL+ CAVKWFLTTGR+  
Sbjct: 158 FLNLKLPDIDIVNSLELAFGQCGSLNRVSK-DKVNKMLKQGTFLVQCAVKWFLTTGRRPL 216

Query: 85  XXXXXVLIFVSELNGVEVSFDEVAKEM 5
                +L+FV+ELN V+V  + +A E+
Sbjct: 217 PMIAAILMFVAELNQVDVRIENIANEI 243


>ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa subunit-like [Glycine
           max]
          Length = 536

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/86 (50%), Positives = 59/86 (68%)
 Frame = -2

Query: 262 LELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXXX 83
           L  + PEFDIV   ER I  C+ F +V + D++ +M KQG FL+ CAVKW+L+TGR+   
Sbjct: 160 LRPDFPEFDIVHLLERTIRNCNGFASVER-DLIERMRKQGVFLIQCAVKWYLSTGRRPVP 218

Query: 82  XXXXVLIFVSELNGVEVSFDEVAKEM 5
               VL+FV+ELNGV V  +E+AKE+
Sbjct: 219 LVVAVLVFVAELNGVGVGMEELAKEV 244


>ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260157 [Vitis vinifera]
           gi|297745306|emb|CBI40386.3| unnamed protein product
           [Vitis vinifera]
          Length = 535

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/87 (50%), Positives = 57/87 (65%)
 Frame = -2

Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86
           +L L+LPE DIV S E A   C S   V K D V +M+KQG+FL+  AVKWFLTTGR+  
Sbjct: 158 FLNLKLPELDIVNSLELAFRKCGSLNRVSK-DKVDQMLKQGKFLVQWAVKWFLTTGRRPL 216

Query: 85  XXXXXVLIFVSELNGVEVSFDEVAKEM 5
                VL+FV+ELN V+V  + +A E+
Sbjct: 217 PMIAAVLMFVAELNQVDVRIENIANEI 243


>emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera]
          Length = 535

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/87 (50%), Positives = 57/87 (65%)
 Frame = -2

Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86
           +L L+LPE DIV S E A   C S   V K D V +M+KQG+FL+  AVKWFLTTGR+  
Sbjct: 158 FLNLKLPELDIVNSLELAFRKCGSLNRVSK-DKVDQMLKQGKFLVQWAVKWFLTTGRRPL 216

Query: 85  XXXXXVLIFVSELNGVEVSFDEVAKEM 5
                VL+FV+ELN V+V  + +A E+
Sbjct: 217 PMIAAVLMFVAELNQVDVRIENIANEI 243


>ref|XP_002305222.1| predicted protein [Populus trichocarpa] gi|222848186|gb|EEE85733.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = -2

Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86
           +L ++LP FDIV SFER +    S  + ++GD++ +M KQG FL+ CAVKWFLTTGR+  
Sbjct: 157 HLGMKLPGFDIVGSFERVVRSL-SISDRVEGDVLERMRKQGIFLVQCAVKWFLTTGRRPL 215

Query: 85  XXXXXVLIFVSELNGVE-VSFDEVAKEM 5
                VL  V+ELNGVE V  +EVA+E+
Sbjct: 216 PVVVAVLALVAELNGVEGVKIEEVAREV 243


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