BLASTX nr result
ID: Coptis24_contig00023762
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023762 (269 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261... 84 2e-14 ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa ... 83 3e-14 ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260... 80 1e-13 emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera] 80 1e-13 ref|XP_002305222.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 >ref|XP_002266602.1| PREDICTED: uncharacterized protein LOC100261683 [Vitis vinifera] gi|297740496|emb|CBI30678.3| unnamed protein product [Vitis vinifera] Length = 530 Score = 83.6 bits (205), Expect = 2e-14 Identities = 44/87 (50%), Positives = 57/87 (65%) Frame = -2 Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86 +L L+LP+ DIV S E A C S V K D V KM+KQG FL+ CAVKWFLTTGR+ Sbjct: 158 FLNLKLPDIDIVNSLELAFGQCGSLNRVSK-DKVNKMLKQGTFLVQCAVKWFLTTGRRPL 216 Query: 85 XXXXXVLIFVSELNGVEVSFDEVAKEM 5 +L+FV+ELN V+V + +A E+ Sbjct: 217 PMIAAILMFVAELNQVDVRIENIANEI 243 >ref|XP_003517770.1| PREDICTED: transcription factor IIIB 50 kDa subunit-like [Glycine max] Length = 536 Score = 82.8 bits (203), Expect = 3e-14 Identities = 43/86 (50%), Positives = 59/86 (68%) Frame = -2 Query: 262 LELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXXX 83 L + PEFDIV ER I C+ F +V + D++ +M KQG FL+ CAVKW+L+TGR+ Sbjct: 160 LRPDFPEFDIVHLLERTIRNCNGFASVER-DLIERMRKQGVFLIQCAVKWYLSTGRRPVP 218 Query: 82 XXXXVLIFVSELNGVEVSFDEVAKEM 5 VL+FV+ELNGV V +E+AKE+ Sbjct: 219 LVVAVLVFVAELNGVGVGMEELAKEV 244 >ref|XP_002275055.1| PREDICTED: uncharacterized protein LOC100260157 [Vitis vinifera] gi|297745306|emb|CBI40386.3| unnamed protein product [Vitis vinifera] Length = 535 Score = 80.5 bits (197), Expect = 1e-13 Identities = 44/87 (50%), Positives = 57/87 (65%) Frame = -2 Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86 +L L+LPE DIV S E A C S V K D V +M+KQG+FL+ AVKWFLTTGR+ Sbjct: 158 FLNLKLPELDIVNSLELAFRKCGSLNRVSK-DKVDQMLKQGKFLVQWAVKWFLTTGRRPL 216 Query: 85 XXXXXVLIFVSELNGVEVSFDEVAKEM 5 VL+FV+ELN V+V + +A E+ Sbjct: 217 PMIAAVLMFVAELNQVDVRIENIANEI 243 >emb|CAN78204.1| hypothetical protein VITISV_019153 [Vitis vinifera] Length = 535 Score = 80.5 bits (197), Expect = 1e-13 Identities = 44/87 (50%), Positives = 57/87 (65%) Frame = -2 Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86 +L L+LPE DIV S E A C S V K D V +M+KQG+FL+ AVKWFLTTGR+ Sbjct: 158 FLNLKLPELDIVNSLELAFRKCGSLNRVSK-DKVDQMLKQGKFLVQWAVKWFLTTGRRPL 216 Query: 85 XXXXXVLIFVSELNGVEVSFDEVAKEM 5 VL+FV+ELN V+V + +A E+ Sbjct: 217 PMIAAVLMFVAELNQVDVRIENIANEI 243 >ref|XP_002305222.1| predicted protein [Populus trichocarpa] gi|222848186|gb|EEE85733.1| predicted protein [Populus trichocarpa] Length = 529 Score = 79.0 bits (193), Expect = 4e-13 Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = -2 Query: 265 YLELELPEFDIVLSFERAIMVCHSFENVLKGDMVGKMIKQGRFLLNCAVKWFLTTGRQXX 86 +L ++LP FDIV SFER + S + ++GD++ +M KQG FL+ CAVKWFLTTGR+ Sbjct: 157 HLGMKLPGFDIVGSFERVVRSL-SISDRVEGDVLERMRKQGIFLVQCAVKWFLTTGRRPL 215 Query: 85 XXXXXVLIFVSELNGVE-VSFDEVAKEM 5 VL V+ELNGVE V +EVA+E+ Sbjct: 216 PVVVAVLALVAELNGVEGVKIEEVAREV 243