BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023753
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   190   1e-46
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   188   5e-46
emb|CBI38482.3| unnamed protein product [Vitis vinifera]              188   5e-46
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
ref|XP_002510967.1| pentatricopeptide repeat-containing protein,...   173   2e-41

>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  190 bits (483), Expect = 1e-46
 Identities = 91/133 (68%), Positives = 111/133 (83%)
 Frame = +3

Query: 174 ISDTTRGLRSENEWETLLRPFDLEELRISVSRITPHQLCQLLALPLDVVTSLELFNRVGT 353
           + + T GL S  EWE LL+PFDL ELR S++RITP+QLC+LL LPLDV TS+ELF   GT
Sbjct: 44  VFNNTNGLDSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGT 103

Query: 354 QRGYSHSFDVYYVIIDKLGASGEFKIIDGLLLQMKEEKIVFREDLFIILMKWYGRAGLPG 533
           Q+GY H FDVYY++IDKLGA+GEFK ID LL+QMK+E IVFRE LFI++MK YGRAGLPG
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 163

Query: 534 QATRLLMEMKDVF 572
           QATRLL++M+ V+
Sbjct: 164 QATRLLLDMRGVY 176


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  188 bits (478), Expect = 5e-46
 Identities = 90/133 (67%), Positives = 110/133 (82%)
 Frame = +3

Query: 174 ISDTTRGLRSENEWETLLRPFDLEELRISVSRITPHQLCQLLALPLDVVTSLELFNRVGT 353
           + + T GL S  EWE LL+PFDL ELR S++RITP+QLC+LL LPLDV TS+ELF   GT
Sbjct: 62  VFNNTNGLDSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGT 121

Query: 354 QRGYSHSFDVYYVIIDKLGASGEFKIIDGLLLQMKEEKIVFREDLFIILMKWYGRAGLPG 533
           Q+GY H FDVYY++IDKLGA+GEFK  D LL+QMK+E IVFRE LFI++MK YGRAGLPG
Sbjct: 122 QKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 181

Query: 534 QATRLLMEMKDVF 572
           QATRLL++M+ V+
Sbjct: 182 QATRLLLDMRGVY 194


>emb|CBI38482.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  188 bits (478), Expect = 5e-46
 Identities = 90/133 (67%), Positives = 110/133 (82%)
 Frame = +3

Query: 174 ISDTTRGLRSENEWETLLRPFDLEELRISVSRITPHQLCQLLALPLDVVTSLELFNRVGT 353
           + + T GL S  EWE LL+PFDL ELR S++RITP+QLC+LL LPLDV TS+ELF   GT
Sbjct: 44  VFNNTNGLDSGTEWERLLKPFDLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGT 103

Query: 354 QRGYSHSFDVYYVIIDKLGASGEFKIIDGLLLQMKEEKIVFREDLFIILMKWYGRAGLPG 533
           Q+GY H FDVYY++IDKLGA+GEFK  D LL+QMK+E IVFRE LFI++MK YGRAGLPG
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 163

Query: 534 QATRLLMEMKDVF 572
           QATRLL++M+ V+
Sbjct: 164 QATRLLLDMRGVY 176


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  181 bits (458), Expect = 1e-43
 Identities = 88/140 (62%), Positives = 108/140 (77%)
 Frame = +3

Query: 153 FCSSSTGISDTTRGLRSENEWETLLRPFDLEELRISVSRITPHQLCQLLALPLDVVTSLE 332
           F    +G +        E EWE LL+PFDL+ELR S ++ITP QLC+LL LPLDV TS+E
Sbjct: 30  FVRKFSGFNSKDNESAHETEWERLLKPFDLKELRRSFNKITPFQLCKLLELPLDVETSME 89

Query: 333 LFNRVGTQRGYSHSFDVYYVIIDKLGASGEFKIIDGLLLQMKEEKIVFREDLFIILMKWY 512
           +F   G Q+GY HSF VYY++IDKLGA+  FK+ID LLLQMKEE IVFRE LFI++MK+Y
Sbjct: 90  IFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYY 149

Query: 513 GRAGLPGQATRLLMEMKDVF 572
           GRAGLPGQATRLL++MK V+
Sbjct: 150 GRAGLPGQATRLLLDMKGVY 169


>ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550082|gb|EEF51569.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 774

 Score =  173 bits (438), Expect = 2e-41
 Identities = 82/124 (66%), Positives = 104/124 (83%)
 Frame = +3

Query: 201 SENEWETLLRPFDLEELRISVSRITPHQLCQLLALPLDVVTSLELFNRVGTQRGYSHSFD 380
           +E EWE LL+PFDL+ELR S ++ITP QLC+LL LPLDV TS+ +F   G+Q+GY H+FD
Sbjct: 44  NETEWERLLKPFDLKELRRSFNQITPFQLCKLLLLPLDVSTSMAIFQWAGSQKGYCHTFD 103

Query: 381 VYYVIIDKLGASGEFKIIDGLLLQMKEEKIVFREDLFIILMKWYGRAGLPGQATRLLMEM 560
           VY+V+IDKLGA+ EFK+ID LLLQ+KEE I FRE LFI +MK+YGRA LPGQATR+L++M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 561 KDVF 572
           K V+
Sbjct: 164 KGVY 167