BLASTX nr result

ID: Coptis24_contig00023749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023749
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   227   1e-57
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   227   1e-57
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              223   3e-56
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...   178   7e-43
ref|XP_002863960.1| hypothetical protein ARALYDRAFT_917877 [Arab...   171   1e-40

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  227 bits (579), Expect = 1e-57
 Identities = 115/213 (53%), Positives = 147/213 (69%)
 Frame = -1

Query: 649  LIKFVLKDPLIAGSIFDFLQPHFLRFYHEDEDAHLNLSCCVKLENGKVFLDEPLDCLLSC 470
            L+K VL DPL AG + DFL PHFL FY ED DA L +SCCVK E+GKV ++EPLDCLLS 
Sbjct: 580  LVKLVLVDPLTAGPVLDFLLPHFLHFYREDADAQLGISCCVKSESGKVCIEEPLDCLLSS 639

Query: 469  VSWILLLQPHGRADLPSEYSLACFGFSLTQENEAGRVSCGEAFXXXXXXXXXXXXXXXXK 290
            +SWILLLQP G+ D PS+ S ACFGFSL+QENEAG++   E+F                +
Sbjct: 640  ISWILLLQPPGKTDRPSDSSWACFGFSLSQENEAGKILSSESFTSALLKIRQCLRRGNME 699

Query: 289  DIVGQCQDSDLQSLEEDKSSYLASILSGIIEVLLNVIATELEKATDVKKVDLEKELIDFI 110
            DI GQ QD+  ++ E++KS   A ILSGI+EVLLN IATE+EKATD++KVDL KELIDF+
Sbjct: 700  DIFGQTQDTVSRTSEDEKSRCCALILSGIVEVLLNTIATEMEKATDIEKVDLLKELIDFV 759

Query: 109  DMHDSLESNACATKQGSSLKRATSRDTPQDALD 11
            + +D L+ +   ++Q + +KR   R    D  D
Sbjct: 760  NHYDFLKKSRSTSRQRNGIKRGNLRTAVHDIPD 792


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  227 bits (579), Expect = 1e-57
 Identities = 115/213 (53%), Positives = 147/213 (69%)
 Frame = -1

Query: 649  LIKFVLKDPLIAGSIFDFLQPHFLRFYHEDEDAHLNLSCCVKLENGKVFLDEPLDCLLSC 470
            L+K VL DPL AG + DFL PHFL FY ED DA L +SCCVK E+GKV ++EPLDCLLS 
Sbjct: 590  LVKLVLVDPLTAGPVLDFLLPHFLHFYREDADAQLGISCCVKSESGKVCIEEPLDCLLSS 649

Query: 469  VSWILLLQPHGRADLPSEYSLACFGFSLTQENEAGRVSCGEAFXXXXXXXXXXXXXXXXK 290
            +SWILLLQP G+ D PS+ S ACFGFSL+QENEAG++   E+F                +
Sbjct: 650  ISWILLLQPPGKTDRPSDSSWACFGFSLSQENEAGKILSSESFTSALLKIRQCLRRGNME 709

Query: 289  DIVGQCQDSDLQSLEEDKSSYLASILSGIIEVLLNVIATELEKATDVKKVDLEKELIDFI 110
            DI GQ QD+  ++ E++KS   A ILSGI+EVLLN IATE+EKATD++KVDL KELIDF+
Sbjct: 710  DIFGQTQDTVSRTSEDEKSRCCALILSGIVEVLLNTIATEMEKATDIEKVDLLKELIDFV 769

Query: 109  DMHDSLESNACATKQGSSLKRATSRDTPQDALD 11
            + +D L+ +   ++Q + +KR   R    D  D
Sbjct: 770  NHYDFLKKSRSTSRQRNGIKRGNLRTAVHDIPD 802


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  223 bits (567), Expect = 3e-56
 Identities = 115/214 (53%), Positives = 147/214 (68%), Gaps = 1/214 (0%)
 Frame = -1

Query: 649  LIKFVLKDPLIAGSIFDFLQPHFLRFYHE-DEDAHLNLSCCVKLENGKVFLDEPLDCLLS 473
            L+K VL DPL AG + DFL PHFL FY E D DA L +SCCVK E+GKV ++EPLDCLLS
Sbjct: 547  LVKLVLVDPLTAGPVLDFLLPHFLHFYREQDADAQLGISCCVKSESGKVCIEEPLDCLLS 606

Query: 472  CVSWILLLQPHGRADLPSEYSLACFGFSLTQENEAGRVSCGEAFXXXXXXXXXXXXXXXX 293
             +SWILLLQP G+ D PS+ S ACFGFSL+QENEAG++   E+F                
Sbjct: 607  SISWILLLQPPGKTDRPSDSSWACFGFSLSQENEAGKILSSESFTSALLKIRQCLRRGNM 666

Query: 292  KDIVGQCQDSDLQSLEEDKSSYLASILSGIIEVLLNVIATELEKATDVKKVDLEKELIDF 113
            +DI GQ QD+  ++ E++KS   A ILSGI+EVLLN IATE+EKATD++KVDL KELIDF
Sbjct: 667  EDIFGQTQDTVSRTSEDEKSRCCALILSGIVEVLLNTIATEMEKATDIEKVDLLKELIDF 726

Query: 112  IDMHDSLESNACATKQGSSLKRATSRDTPQDALD 11
            ++ +D L+ +   ++Q + +KR   R    D  D
Sbjct: 727  VNHYDFLKKSRSTSRQRNGIKRGNLRTAVHDIPD 760


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  178 bits (452), Expect = 7e-43
 Identities = 96/207 (46%), Positives = 129/207 (62%)
 Frame = -1

Query: 649  LIKFVLKDPLIAGSIFDFLQPHFLRFYHEDEDAHLNLSCCVKLENGKVFLDEPLDCLLSC 470
            L+K VL DP   G + DFL PHF  F+ ED D  L +S C K  +G V ++EPLD L+SC
Sbjct: 603  LLKLVLADPSCGGPVLDFLLPHFRCFFKEDADVQLEISRCTKSLSGNVVIEEPLDALMSC 662

Query: 469  VSWILLLQPHGRADLPSEYSLACFGFSLTQENEAGRVSCGEAFXXXXXXXXXXXXXXXXK 290
            VS ILLLQPHG+AD P + S   FGFSL+QENE G     E+F                +
Sbjct: 663  VSSILLLQPHGKADCP-DSSRPYFGFSLSQENELGSDLSRESFSNALLKIQKFLKKINLE 721

Query: 289  DIVGQCQDSDLQSLEEDKSSYLASILSGIIEVLLNVIATELEKATDVKKVDLEKELIDFI 110
            D + + Q     S++E+K    A IL+GI+EV++N IAT L KATD++KVDLEKEL+ F+
Sbjct: 722  DFLSRIQGDSSTSVQEEKRKCCALILAGILEVVVNTIATRLNKATDIEKVDLEKELVGFV 781

Query: 109  DMHDSLESNACATKQGSSLKRATSRDT 29
            ++H+SLE + C T+  + +KR   R T
Sbjct: 782  NLHESLEKDLC-TRLSTGIKRGNVRAT 807


>ref|XP_002863960.1| hypothetical protein ARALYDRAFT_917877 [Arabidopsis lyrata subsp.
            lyrata] gi|297309795|gb|EFH40219.1| hypothetical protein
            ARALYDRAFT_917877 [Arabidopsis lyrata subsp. lyrata]
          Length = 1450

 Score =  171 bits (432), Expect = 1e-40
 Identities = 93/211 (44%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
 Frame = -1

Query: 649  LIKFVLKDPLIAGSIFDFLQPHFLRFYHEDEDAHLNLSCCVKLENGKVFLDEPLDCLLSC 470
            L+K VL DP   G + DFL PHFLRF+ +D D  L +  C+KLE GK  ++EPLD LL C
Sbjct: 606  LVKLVLIDPSTGGHVLDFLMPHFLRFFRQDTDFQLGIISCIKLEGGKYIIEEPLDRLLFC 665

Query: 469  VSWILLLQPHGRADLPSEYSLACFGFSLTQENE-AGRVSCGEAFXXXXXXXXXXXXXXXX 293
            +SWILLLQ H  +D PS+ +  CFGFSL+Q+NE  GR    E +                
Sbjct: 666  ISWILLLQVHNSSDRPSDAAWPCFGFSLSQDNEQGGRNISHEVYSNALVKIRNFLLGKNL 725

Query: 292  KDIVGQCQDSDLQSLEEDKSSYLASILSGIIEVLLNVIATELEKATDVKKVDLEKELIDF 113
            +DIVGQ QD+   SLE+DK      I+ GII+V LN I  +LEK  + KK  + KE++D 
Sbjct: 726  EDIVGQSQDTVSASLEDDKRKSYCLIILGIIQVQLNYIIVDLEKQPEGKKGAVRKEIVDL 785

Query: 112  IDMHDSLESNACATKQ---GSSLKRATSRDT 29
            ID+++SLE +    K    G  ++ +T  DT
Sbjct: 786  IDLYESLEKDVGKLKPSNIGKRVRFSTCNDT 816


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