BLASTX nr result

ID: Coptis24_contig00023727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023727
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76008.1| hypothetical protein VITISV_013342 [Vitis vinifera]   482   e-133
ref|XP_002265800.2| PREDICTED: myb family transcription factor A...   471   e-130
gb|AAV85474.1| myb family transcription factor-related protein [...   469   e-130
ref|XP_002523053.1| transcription factor, putative [Ricinus comm...   466   e-129
ref|XP_002312227.1| predicted protein [Populus trichocarpa] gi|2...   458   e-126

>emb|CAN76008.1| hypothetical protein VITISV_013342 [Vitis vinifera]
          Length = 356

 Score =  482 bits (1240), Expect = e-133
 Identities = 249/365 (68%), Positives = 288/365 (78%), Gaps = 11/365 (3%)
 Frame = -2

Query: 1238 MFHSKKP-TMNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 1062
            MFH KKP TMNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP
Sbjct: 1    MFHHKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 60

Query: 1061 KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGR 882
            KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASAL+LQRN +SS+G+M R
Sbjct: 61   KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNIASSSGVMSR 120

Query: 881  SMNDRNVHISEALRMQVEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYQTFAGDNM 702
            + N+          MQ+EVQRRLHEQLEVQ+HLQLRIEAQGKYMQ ILEKA QT AG+NM
Sbjct: 121  NTNE----------MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQTILEKACQTLAGENM 170

Query: 701  ASGSYKSGGIQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPIN 522
            A G+YK  G Q V DM  MKD   S+ FPSLQDL+IYGG+ LD+QQ MDR SLDGF    
Sbjct: 171  ALGNYKGIGNQGVPDMGAMKDFGSSLNFPSLQDLNIYGGDQLDLQQSMDR-SLDGFIQNT 229

Query: 521  DNICLGRRRPNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVPLTIDG 354
            +N+CLG++RP+ Y  + KNPL W+DD+R+Q+LG     LGSQ+DPFK D IQ  P ++D 
Sbjct: 230  ENMCLGKKRPSPYSGSGKNPLIWSDDLRMQELGTAASCLGSQDDPFKGDQIQIAPPSMDR 289

Query: 353  GNEMDPIGDVYETKPAFHGDSVVDRKYE--ASAKLDRPSPQRGSLSTNRVNSMSKVG--- 189
            G +MD I D+YETKP   GD + ++K++   SAKL RPSP+R  L T+R+N M   G   
Sbjct: 290  GADMDSISDIYETKPILSGDPMGEKKFDGSGSAKLGRPSPRRAPLPTDRMNPMINAGAMP 349

Query: 188  -GRNS 177
             GR+S
Sbjct: 350  QGRSS 354


>ref|XP_002265800.2| PREDICTED: myb family transcription factor APL [Vitis vinifera]
          Length = 347

 Score =  471 bits (1212), Expect = e-130
 Identities = 242/356 (67%), Positives = 281/356 (78%), Gaps = 10/356 (2%)
 Frame = -2

Query: 1214 MNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 1035
            MNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV
Sbjct: 1    MNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 60

Query: 1034 KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGRSMNDRNVHI 855
            KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASAL+LQRN +SS+G+M R+ N+     
Sbjct: 61   KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNIASSSGVMSRNTNE----- 115

Query: 854  SEALRMQVEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYQTFAGDNMASGSYKSGG 675
                 MQ+EVQRRLHEQLEVQ+HLQLRIEAQGKYMQ ILEKA QT AG+NMA G+YK  G
Sbjct: 116  -----MQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQTILEKACQTLAGENMALGNYKGIG 170

Query: 674  IQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPINDNICLGRRR 495
             Q V DM  MKD   S+ FPSLQDL+IYGG+ LD+QQ MDR SLDGF    +N+CLG++R
Sbjct: 171  NQGVPDMGAMKDFGSSLNFPSLQDLNIYGGDQLDLQQSMDR-SLDGFIQNTENMCLGKKR 229

Query: 494  PNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVPLTIDGGNEMDPIGD 327
            P+ Y  + KNPL W+DD+R+Q+LG     LGSQ+DPFK D IQ  P ++D G +MD I D
Sbjct: 230  PSPYSGSGKNPLIWSDDLRMQELGTAASCLGSQDDPFKGDQIQIAPPSMDRGADMDSISD 289

Query: 326  VYETKPAFHGDSVVDRKYE--ASAKLDRPSPQRGSLSTNRVNSMSKVG----GRNS 177
            +YETKP   GD + ++K++   SAKL RPSP+R  L T+R+N M   G    GR+S
Sbjct: 290  IYETKPILSGDPMGEKKFDGSGSAKLGRPSPRRAPLPTDRMNPMINAGAMPQGRSS 345


>gb|AAV85474.1| myb family transcription factor-related protein [Populus tomentosa]
          Length = 356

 Score =  469 bits (1207), Expect = e-130
 Identities = 243/366 (66%), Positives = 286/366 (78%), Gaps = 10/366 (2%)
 Frame = -2

Query: 1238 MFHSKKP-TMNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 1062
            MFH+KKP TMNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP
Sbjct: 1    MFHTKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 60

Query: 1061 KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGR 882
            KTIMRVMGVKGLTLYHLKSHLQKFRLGKQP K+F+DHSIKDASALDLQR+A+SS+G+M R
Sbjct: 61   KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPLKDFSDHSIKDASALDLQRSAASSSGMMSR 120

Query: 881  SMNDRNVHISEALRMQVEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYQTFAGD-N 705
            SMN+          MQ+EVQRRLHEQLEVQ+HLQLR EAQGKY+Q++LEKA QT AGD N
Sbjct: 121  SMNE----------MQMEVQRRLHEQLEVQRHLQLRTEAQGKYIQSLLEKACQTLAGDQN 170

Query: 704  MASGSYKSGGIQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPI 525
            +ASGSYK  G Q +  M  MK+   S+ FP+ QDL+IYGG+ LD+Q  MDR SLDGF   
Sbjct: 171  LASGSYKGLGNQGIPGMGAMKEFG-SLNFPAFQDLNIYGGDQLDLQHNMDRPSLDGFMAN 229

Query: 524  NDNICLGRRRPNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVPLTID 357
            NDNICLG++RP+ Y  + K+PL W DD+RLQ LG     L  Q+DPFK D IQ  P ++D
Sbjct: 230  NDNICLGKKRPSPYDGSGKSPLIWPDDLRLQDLGSGPACLEPQDDPFKGDQIQMAPPSMD 289

Query: 356  GGNEMDPIGDVYETKPAFHGDSVVDRKYEASAKLDRPSPQRGSLSTNRVNSMSKVG---- 189
             G ++D I D+YE KPA  GD + ++K+EASAKL RPSP+R  L+  R++ M   G    
Sbjct: 290  RGTDLDSISDMYEMKPALQGDGLDEKKFEASAKLKRPSPRRSPLAAERMSPMINTGAMPQ 349

Query: 188  GRNSNY 171
            GRNS +
Sbjct: 350  GRNSPF 355


>ref|XP_002523053.1| transcription factor, putative [Ricinus communis]
            gi|223537710|gb|EEF39332.1| transcription factor,
            putative [Ricinus communis]
          Length = 346

 Score =  466 bits (1199), Expect = e-129
 Identities = 236/356 (66%), Positives = 280/356 (78%), Gaps = 8/356 (2%)
 Frame = -2

Query: 1214 MNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 1035
            MNSH+R MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV
Sbjct: 1    MNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGV 60

Query: 1034 KGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGRSMNDRNVHI 855
            KGLTLYHLKSHLQKFRLGKQPHKEF+D SIKD  ALDLQR+A+S++ +MGRSMN+     
Sbjct: 61   KGLTLYHLKSHLQKFRLGKQPHKEFSDPSIKDGPALDLQRSAASTSAMMGRSMNE----- 115

Query: 854  SEALRMQVEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYQTFAGDNMASGSYKSGG 675
                 MQ+EVQRRLHEQLEVQ+HLQLRIEA GKYMQN+LEKAYQT AG+NMASGSYK  G
Sbjct: 116  -----MQMEVQRRLHEQLEVQRHLQLRIEAHGKYMQNMLEKAYQTLAGENMASGSYKGIG 170

Query: 674  IQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPINDNICLGRRR 495
             Q V D+  MKD  P + FP  QDL+IYGG+ LD+QQ MDR SLDGF P ND+ICLG++R
Sbjct: 171  NQGVPDLGAMKDFGP-LNFPQFQDLNIYGGDQLDLQQNMDRPSLDGFMPNNDHICLGKKR 229

Query: 494  PNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVPLTIDGGNEMDPIGD 327
             + Y  + K+PL W+DD+RLQ LG     LG  +D FK+D IQ  P ++D G ++D I D
Sbjct: 230  SSPYSGSGKSPLIWSDDLRLQDLGSAPTCLGPPDDLFKSDQIQIAPPSMDRGTDLDSISD 289

Query: 326  VYETKPAFHGDSVVDRKYEASAKLDRPSPQRGSLSTNRVNSMSKVGG----RNSNY 171
            +YETKP   GD++ ++K++AS KL+RPSP+R  L T+R++ M   G     RNS +
Sbjct: 290  IYETKPMLQGDAMGEKKFDASTKLERPSPRRAPLPTDRMSPMINSGAMPQDRNSPF 345


>ref|XP_002312227.1| predicted protein [Populus trichocarpa] gi|222852047|gb|EEE89594.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  458 bits (1178), Expect = e-126
 Identities = 242/367 (65%), Positives = 285/367 (77%), Gaps = 11/367 (2%)
 Frame = -2

Query: 1238 MFHSKKP-TMNSHERSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP 1062
            MFH+KKP TMNSH+R MCVQ DSGLVLTTDPKPRLRWTVELHERFVDAV QLGGPDKATP
Sbjct: 1    MFHTKKPSTMNSHDRPMCVQ-DSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATP 59

Query: 1061 KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALDLQRNASSSAGIMGR 882
            KTIMRVMGVKGLTLYHLKSHLQKFRLGKQ HKEFNDHSIKDASALDLQR+A+SS+G++ R
Sbjct: 60   KTIMRVMGVKGLTLYHLKSHLQKFRLGKQLHKEFNDHSIKDASALDLQRSAASSSGMISR 119

Query: 881  SMNDRNVHISEALRMQVEVQRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYQTFAGD-N 705
            SMND N H+  A+RMQ+EVQRRLHEQLEVQ+HLQLR EAQGKY+Q++LEKA QT AGD +
Sbjct: 120  SMND-NSHMIYAIRMQMEVQRRLHEQLEVQRHLQLRTEAQGKYIQSLLEKACQTLAGDQD 178

Query: 704  MASGSYKSGGIQEVADMNNMKDLSPSITFPSLQDLHIYGGEHLDMQQQMDRSSLDGFSPI 525
            +ASGSYK  G Q V DM  MKD  P + FP  QDL+IYG   LD+   MDR SLDGF   
Sbjct: 179  LASGSYKGIGNQGVPDMGAMKDFGP-LNFPPFQDLNIYGSGQLDLLHNMDRPSLDGFMSN 237

Query: 524  N-DNICLGRRRPNSYGSTSKNPLGWTDDIRLQQLG----MLGSQEDPFKNDPIQGVPLTI 360
            N D+ICLG++R N Y  + K+PL W+DD+RLQ LG     LG Q+DP K D IQ  P  +
Sbjct: 238  NHDDICLGKKRTNPYAGSGKSPLIWSDDLRLQDLGSGLSCLGPQDDPLKGDQIQIAPPLM 297

Query: 359  DGGNEMDPIGDVYETKPAFHGDSVVDRKYEASAKLDRPSPQRGSLSTNRVNSMSKVG--- 189
            D G ++D +  +Y TKP   GD++ ++K EASAK +RPSP+R  L+ +R++ M   G   
Sbjct: 298  DSGTDLDSLSGLYGTKPVHQGDALDEKKLEASAKTERPSPRRAPLAADRMSPMINTGVMP 357

Query: 188  -GRNSNY 171
             GRNS +
Sbjct: 358  QGRNSPF 364


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