BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023726
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|2...   232   2e-59
ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-59
ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus com...   230   8e-59
ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis ...   230   8e-59
ref|XP_002873421.1| ribosomal protein L17 family protein [Arabid...   225   3e-57

>ref|XP_002310514.1| predicted protein [Populus trichocarpa] gi|222853417|gb|EEE90964.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  232 bits (592), Expect = 2e-59
 Identities = 112/129 (86%), Positives = 122/129 (94%)
 Frame = +1

Query: 49  EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 228
           + RKLNRPTGHRMSM RTMVSQL+KHERIETT+ KAKE+RRLADNMVQLGKEG+LCA+RR
Sbjct: 3   KFRKLNRPTGHRMSMLRTMVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCASRR 62

Query: 229 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 408
           AAAFVRGDDVIHKLF+ELAYRYKDR+GGYTR+LRTRIRVGDAAPMAYIEF+DRENELRQS
Sbjct: 63  AAAFVRGDDVIHKLFSELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRQS 122

Query: 409 KPPIPLQAQ 435
           KPP P   Q
Sbjct: 123 KPPTPQPPQ 131


>ref|XP_002307023.1| predicted protein [Populus trichocarpa] gi|222856472|gb|EEE94019.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  231 bits (590), Expect = 4e-59
 Identities = 111/129 (86%), Positives = 122/129 (94%)
 Frame = +1

Query: 49  EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 228
           + RKLNRPTGHRMSM RT+VSQL+KHERIETT+ KAKE+RRLADNMVQLGKEG+LCAARR
Sbjct: 3   KFRKLNRPTGHRMSMLRTLVSQLIKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAARR 62

Query: 229 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 408
           AAAFVRGDDVIHKLF+E+AYRYKDR+GGYTR+LRTRIRVGDAAPMAYIEF+DRENELRQS
Sbjct: 63  AAAFVRGDDVIHKLFSEMAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRQS 122

Query: 409 KPPIPLQAQ 435
           KPP P   Q
Sbjct: 123 KPPTPQPPQ 131


>ref|XP_002517236.1| ribosomal protein L17, putative [Ricinus communis]
           gi|223543607|gb|EEF45136.1| ribosomal protein L17,
           putative [Ricinus communis]
          Length = 160

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/129 (86%), Positives = 121/129 (93%)
 Frame = +1

Query: 49  EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 228
           + RKL+RPTGHRMS+ RTMVSQLVKHERIETTI KAKE+RRLADNMVQLGKEG+LCAARR
Sbjct: 3   KFRKLSRPTGHRMSLLRTMVSQLVKHERIETTIAKAKEIRRLADNMVQLGKEGSLCAARR 62

Query: 229 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 408
           AAAFVRGDDV+HKLFTELAYRYKDR GGYTR+LRTRIRVGDAAPMAYIEF+DRENELR+S
Sbjct: 63  AAAFVRGDDVLHKLFTELAYRYKDREGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRKS 122

Query: 409 KPPIPLQAQ 435
           KPP P   Q
Sbjct: 123 KPPTPQPPQ 131


>ref|XP_002281739.1| PREDICTED: 50S ribosomal protein L17 [Vitis vinifera]
           gi|296088573|emb|CBI37564.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  230 bits (587), Expect = 8e-59
 Identities = 113/129 (87%), Positives = 120/129 (93%)
 Frame = +1

Query: 49  EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 228
           + RKL RPTGHRMSM RTMVSQLVKHERIETT+ KAKE+RRLADNMVQLGKEG+LCAARR
Sbjct: 3   KFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMVQLGKEGSLCAARR 62

Query: 229 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 408
           AAAFVRGDDVIHKLFTELAYRYKDR+GGYTR+LRTRIRVGDAAPMAYIEF+DRENELRQS
Sbjct: 63  AAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRQS 122

Query: 409 KPPIPLQAQ 435
           KP  P   Q
Sbjct: 123 KPATPQPPQ 131


>ref|XP_002873421.1| ribosomal protein L17 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319258|gb|EFH49680.1| ribosomal protein
           L17 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 160

 Score =  225 bits (574), Expect = 3e-57
 Identities = 111/129 (86%), Positives = 118/129 (91%)
 Frame = +1

Query: 49  EMRKLNRPTGHRMSMFRTMVSQLVKHERIETTITKAKEVRRLADNMVQLGKEGTLCAARR 228
           + RKL RP GHRMSM RTMVSQLVKHERIETT+TKAKEVRRLADNMVQLGKEGTL AARR
Sbjct: 3   KFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMVQLGKEGTLAAARR 62

Query: 229 AAAFVRGDDVIHKLFTELAYRYKDRSGGYTRILRTRIRVGDAAPMAYIEFVDRENELRQS 408
           AA FVRGDDV+HK+FTELAYRYKDR+GGYTR+LRTRIRVGDAAPMAYIEF+DRENELRQS
Sbjct: 63  AAGFVRGDDVLHKIFTELAYRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFIDRENELRQS 122

Query: 409 KPPIPLQAQ 435
           KP  P   Q
Sbjct: 123 KPATPQPPQ 131