BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023715
         (1407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513370.1| conserved hypothetical protein [Ricinus comm...   376   e-102
ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254...   371   e-100
emb|CBI24192.3| unnamed protein product [Vitis vinifera]              371   e-100
ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|2...   363   6e-98
ref|NP_565202.1| Mitochondrial transcription termination factor ...   332   1e-88

>ref|XP_002513370.1| conserved hypothetical protein [Ricinus communis]
            gi|223547278|gb|EEF48773.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 384

 Score =  376 bits (966), Expect = e-102
 Identities = 193/331 (58%), Positives = 248/331 (74%)
 Frame = -1

Query: 1269 NVSSSPLFYPKDSTQLFKRCGCNDAEISKIFLRQPSLLKANVTILGSKLDILLGLGLTSS 1090
            N +   L  PKDS  + ++ GC+D ++ KI  R+PSL  A++T L SKL++L GLG+  +
Sbjct: 54   NDTEGGLEQPKDSIGVLRKWGCSDRDLLKILSRRPSLRNADLTHLQSKLNLLQGLGIKPA 113

Query: 1089 DLVKMINCRPRFLNSKISCDFDNRIDFLQSLFGSKEGLLKAIVRNPSLLVYNLEKDIKRC 910
            DLVK+INCRPRFL+S+I+  FD R+ +  +LFGSKE LLKAIVRNPSLL Y+    IK  
Sbjct: 114  DLVKIINCRPRFLSSRINHCFDERLQYFMTLFGSKEVLLKAIVRNPSLLTYDFHNCIKPA 173

Query: 909  VSSYEGLGISRKDLVPLLISRPMLIPRTSFNGEKLEYIHKTGLSNNSKMYKHIVTLIAIS 730
            ++ YE +G+S+ DL+P+L+SRP +IPRTSF+ +K+EYI +TG+ N SKMYK++VT+I IS
Sbjct: 174  IALYERMGVSKNDLIPMLLSRPTVIPRTSFDDQKIEYIRRTGVPNTSKMYKYVVTIIGIS 233

Query: 729  RLETIREKVANLEKFGFSCDQVMVLFGRSPLLLTLSGDKVQRNMTFVIGTLNLPATVVLQ 550
            ++ETIREKVAN EKFGFS ++V   FGRSPL LTLS DKVQRNMTFV+GT+ LPA VVLQ
Sbjct: 234  KIETIREKVANFEKFGFSDEEVWRFFGRSPLFLTLSVDKVQRNMTFVVGTMKLPANVVLQ 293

Query: 549  YPFLLLFNLESVLRPRFVVAEKIRTMCLHPQVKGLDLFRAFRMTEPRFFKAFITGQSKDV 370
            YP+LL  NL+ VL+PR ++A KI+ M L PQ+KG  L RA RMTE RF KAF++    DV
Sbjct: 294  YPYLLYNNLDGVLKPRMLLAGKIQDMNLCPQIKGPLLMRAMRMTEQRFLKAFVSCHPTDV 353

Query: 369  TAELMKLYTKAKDIKILAESSRTSPYKGFPF 277
              ELM  Y KAK  K LAESS+    KGFPF
Sbjct: 354  AEELMVFYEKAKCCKRLAESSKKMITKGFPF 384


>ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254688 [Vitis vinifera]
          Length = 492

 Score =  371 bits (953), Expect = e-100
 Identities = 190/323 (58%), Positives = 248/323 (76%)
 Frame = -1

Query: 1245 YPKDSTQLFKRCGCNDAEISKIFLRQPSLLKANVTILGSKLDILLGLGLTSSDLVKMINC 1066
            +P +ST +F++ GC+D+EI+KIF+R+PSL +A+  ++ SKL++L  LGLTS+DLVK+INC
Sbjct: 170  HPINSTDVFRKWGCSDSEIAKIFVRRPSLRRADPNLIQSKLNVLSLLGLTSADLVKIINC 229

Query: 1065 RPRFLNSKISCDFDNRIDFLQSLFGSKEGLLKAIVRNPSLLVYNLEKDIKRCVSSYEGLG 886
            RPRFL+ +I+  FD RI+F   LFGS++ L KAIVRNPSLL+Y+L   IKR V  YEG+G
Sbjct: 230  RPRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSLLIYDLNSKIKRVVELYEGMG 289

Query: 885  ISRKDLVPLLISRPMLIPRTSFNGEKLEYIHKTGLSNNSKMYKHIVTLIAISRLETIREK 706
            ++RKD + ++ SRP +I RTSFN EKLEYI +TG+S  SKMYK++V L+ ISRLETIREK
Sbjct: 290  VARKDFILMVSSRPTMISRTSFNDEKLEYIRRTGVSKKSKMYKYVVVLMGISRLETIREK 349

Query: 705  VANLEKFGFSCDQVMVLFGRSPLLLTLSGDKVQRNMTFVIGTLNLPATVVLQYPFLLLFN 526
            V NLEKFGFS D+V+ LFGRSPL+LTLS DKVQRNMT+V+GT+ LPA  VL  PFLL  N
Sbjct: 350  VGNLEKFGFSEDEVLGLFGRSPLVLTLSVDKVQRNMTYVLGTMKLPARAVLDCPFLLYAN 409

Query: 525  LESVLRPRFVVAEKIRTMCLHPQVKGLDLFRAFRMTEPRFFKAFITGQSKDVTAELMKLY 346
            LE VL+PRF++A KI  M L PQ+KG  LFRA RM E RF  AF+T   + ++  LM+ Y
Sbjct: 410  LEVVLKPRFLLAGKIEEMGLAPQIKGPKLFRALRMKEDRFLGAFVTCHPESLSNALMEYY 469

Query: 345  TKAKDIKILAESSRTSPYKGFPF 277
               K +K LA +S+ +  +GFPF
Sbjct: 470  RNMKGLKRLAVASKKNLRQGFPF 492


>emb|CBI24192.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  371 bits (953), Expect = e-100
 Identities = 190/323 (58%), Positives = 248/323 (76%)
 Frame = -1

Query: 1245 YPKDSTQLFKRCGCNDAEISKIFLRQPSLLKANVTILGSKLDILLGLGLTSSDLVKMINC 1066
            +P +ST +F++ GC+D+EI+KIF+R+PSL +A+  ++ SKL++L  LGLTS+DLVK+INC
Sbjct: 88   HPINSTDVFRKWGCSDSEIAKIFVRRPSLRRADPNLIQSKLNVLSLLGLTSADLVKIINC 147

Query: 1065 RPRFLNSKISCDFDNRIDFLQSLFGSKEGLLKAIVRNPSLLVYNLEKDIKRCVSSYEGLG 886
            RPRFL+ +I+  FD RI+F   LFGS++ L KAIVRNPSLL+Y+L   IKR V  YEG+G
Sbjct: 148  RPRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSLLIYDLNSKIKRVVELYEGMG 207

Query: 885  ISRKDLVPLLISRPMLIPRTSFNGEKLEYIHKTGLSNNSKMYKHIVTLIAISRLETIREK 706
            ++RKD + ++ SRP +I RTSFN EKLEYI +TG+S  SKMYK++V L+ ISRLETIREK
Sbjct: 208  VARKDFILMVSSRPTMISRTSFNDEKLEYIRRTGVSKKSKMYKYVVVLMGISRLETIREK 267

Query: 705  VANLEKFGFSCDQVMVLFGRSPLLLTLSGDKVQRNMTFVIGTLNLPATVVLQYPFLLLFN 526
            V NLEKFGFS D+V+ LFGRSPL+LTLS DKVQRNMT+V+GT+ LPA  VL  PFLL  N
Sbjct: 268  VGNLEKFGFSEDEVLGLFGRSPLVLTLSVDKVQRNMTYVLGTMKLPARAVLDCPFLLYAN 327

Query: 525  LESVLRPRFVVAEKIRTMCLHPQVKGLDLFRAFRMTEPRFFKAFITGQSKDVTAELMKLY 346
            LE VL+PRF++A KI  M L PQ+KG  LFRA RM E RF  AF+T   + ++  LM+ Y
Sbjct: 328  LEVVLKPRFLLAGKIEEMGLAPQIKGPKLFRALRMKEDRFLGAFVTCHPESLSNALMEYY 387

Query: 345  TKAKDIKILAESSRTSPYKGFPF 277
               K +K LA +S+ +  +GFPF
Sbjct: 388  RNMKGLKRLAVASKKNLRQGFPF 410


>ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|222853574|gb|EEE91121.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score =  363 bits (932), Expect = 6e-98
 Identities = 182/317 (57%), Positives = 245/317 (77%)
 Frame = -1

Query: 1227 QLFKRCGCNDAEISKIFLRQPSLLKANVTILGSKLDILLGLGLTSSDLVKMINCRPRFLN 1048
            ++ +R GC+D +I K+FLR+PSL  A+++ L  KL++L GLG+TS+DLVK+INCRPR L+
Sbjct: 2    EVLRRYGCSDDDIEKMFLRRPSLRNADLSQLQFKLNLLWGLGITSNDLVKIINCRPRLLS 61

Query: 1047 SKISCDFDNRIDFLQSLFGSKEGLLKAIVRNPSLLVYNLEKDIKRCVSSYEGLGISRKDL 868
             +I+  FD R+++  +LFGS+E LLKAI+RNPSLL Y+    IK  ++ YEGLGISR+DL
Sbjct: 62   VRINHFFDERLEYFMTLFGSRETLLKAIIRNPSLLTYDFHNRIKPVITLYEGLGISREDL 121

Query: 867  VPLLISRPMLIPRTSFNGEKLEYIHKTGLSNNSKMYKHIVTLIAISRLETIREKVANLEK 688
            VPLL+SRP +IPRTSFN EK+EYI K+G+S +S M+KH+V++I +SR +TI EK AN+EK
Sbjct: 122  VPLLLSRPTMIPRTSFNDEKMEYIRKSGVSKDSNMFKHVVSIIGVSRSQTICEKAANIEK 181

Query: 687  FGFSCDQVMVLFGRSPLLLTLSGDKVQRNMTFVIGTLNLPATVVLQYPFLLLFNLESVLR 508
            FG S ++V  L GRSP LLTLS DKVQRNMTFV+GT+ LPA V+L++PFLL  NLE+VL+
Sbjct: 182  FGMSNEEVWHLIGRSPYLLTLSVDKVQRNMTFVVGTMKLPANVILEHPFLLYNNLEAVLK 241

Query: 507  PRFVVAEKIRTMCLHPQVKGLDLFRAFRMTEPRFFKAFITGQSKDVTAELMKLYTKAKDI 328
            PR+++A KI  M L P++KG  + RA RM E RF KAF++     V  ELM+ YT AK +
Sbjct: 242  PRWLLAGKIEEMGLCPKIKGSLMLRALRMAEQRFLKAFVSCHPDVVAKELMEFYTTAKCV 301

Query: 327  KILAESSRTSPYKGFPF 277
            K LA SS+ + +KGFPF
Sbjct: 302  KRLAVSSKKAVFKGFPF 318


>ref|NP_565202.1| Mitochondrial transcription termination factor family protein
            [Arabidopsis thaliana] gi|3152561|gb|AAC17042.1| Contains
            similarity to myb protein homolog gb|Z13997 from Petunia
            hybrida [Arabidopsis thaliana]
            gi|332198097|gb|AEE36218.1| Mitochondrial transcription
            termination factor family protein [Arabidopsis thaliana]
          Length = 399

 Score =  332 bits (851), Expect = 1e-88
 Identities = 168/331 (50%), Positives = 239/331 (72%)
 Frame = -1

Query: 1269 NVSSSPLFYPKDSTQLFKRCGCNDAEISKIFLRQPSLLKANVTILGSKLDILLGLGLTSS 1090
            +++SSPL       Q+ +R GC+D EISK+F R+P+L +ANV  L  KL +L  LG+TSS
Sbjct: 78   DITSSPL-------QVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSS 130

Query: 1089 DLVKMINCRPRFLNSKISCDFDNRIDFLQSLFGSKEGLLKAIVRNPSLLVYNLEKDIKRC 910
            DLVK++NCRPRF + ++    D RI++   + GSKE L + I+RNPSL++Y+L+  IK  
Sbjct: 131  DLVKILNCRPRFFSCRLV--LDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIKPA 188

Query: 909  VSSYEGLGISRKDLVPLLISRPMLIPRTSFNGEKLEYIHKTGLSNNSKMYKHIVTLIAIS 730
            +  Y+GLG S++DLV +LISRP LIPRT+FN EK EYI KTG++  SKM+K++  +I +S
Sbjct: 189  IEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVIIGVS 248

Query: 729  RLETIREKVANLEKFGFSCDQVMVLFGRSPLLLTLSGDKVQRNMTFVIGTLNLPATVVLQ 550
            R+ETI EKV NLEKFGFS +++  L+G+ P+LL+LS +KVQRNMTFVI ++ LPA  V++
Sbjct: 249  RMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVK 308

Query: 549  YPFLLLFNLESVLRPRFVVAEKIRTMCLHPQVKGLDLFRAFRMTEPRFFKAFITGQSKDV 370
            +P LLL NLES L+PR  + +++  M L P +K + +FRA RM+E RF K ++    +D+
Sbjct: 309  HPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVMCHPQDI 368

Query: 369  TAELMKLYTKAKDIKILAESSRTSPYKGFPF 277
              ELM+ Y K+K++K LAE S+    KGFPF
Sbjct: 369  ATELMEFYEKSKNMKRLAEKSKKYIRKGFPF 399