BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023708
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   276   2e-72
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   276   2e-72
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   258   1e-66
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]    166   5e-39

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  276 bits (707), Expect = 2e-72
 Identities = 133/223 (59%), Positives = 170/223 (76%)
 Frame = +2

Query: 2    SGFLESASKIFVQMREKDVISLTVMILGYSLHGHGEIGVGLFHKMKKNLNFEIDDVTYDA 181
            SGF+ESA+KIF  M+++D IS TVMILGYSLHG GE+GV LF KM+KN + EID + Y A
Sbjct: 343  SGFIESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAA 402

Query: 182  LLRACRTACMVEEGKDFFKCIRETKVEHRCLMISLLVRARLFDEAKDFVEEHHLEWNPDV 361
             L AC TA +VE+G+ +F CI   K  H  LM++LL R  LFDEA+ F+EEH LE + +V
Sbjct: 403  ALHACTTARLVEQGRFYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEV 462

Query: 362  QRALLDGCRIYQDKKMAKQIVERLIELEPLNSDNYVLLSNLYAAYTQWDRVKSSREMITD 541
             RALLDGCRI+ + + AK+++E+L +L+ LN+DNYVLLSN Y+++ +WD V   RE I D
Sbjct: 463  LRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRD 522

Query: 542  MGLMPKRAYSWIEVRNKVHVFEAGDVSHPRSERIYHELEFLMK 670
            MGL P++AYSWIE RNK+HVF  GDVSHPRSE+IY EL  LMK
Sbjct: 523  MGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMK 565


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  276 bits (707), Expect = 2e-72
 Identities = 133/223 (59%), Positives = 170/223 (76%)
 Frame = +2

Query: 2    SGFLESASKIFVQMREKDVISLTVMILGYSLHGHGEIGVGLFHKMKKNLNFEIDDVTYDA 181
            SGF+ESA+KIF  M+++D IS TVMILGYSLHG GE+GV LF KM+KN + EID + Y A
Sbjct: 415  SGFIESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSSVEIDQIAYAA 474

Query: 182  LLRACRTACMVEEGKDFFKCIRETKVEHRCLMISLLVRARLFDEAKDFVEEHHLEWNPDV 361
             L AC TA +VE+G+ +F CI   K  H  LM++LL R  LFDEA+ F+EEH LE + +V
Sbjct: 475  ALHACTTARLVEQGRFYFNCITAPKSRHYALMVALLSRVGLFDEARVFMEEHKLEGHVEV 534

Query: 362  QRALLDGCRIYQDKKMAKQIVERLIELEPLNSDNYVLLSNLYAAYTQWDRVKSSREMITD 541
             RALLDGCRI+ + + AK+++E+L +L+ LN+DNYVLLSN Y+++ +WD V   RE I D
Sbjct: 535  LRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDMVNELRETIRD 594

Query: 542  MGLMPKRAYSWIEVRNKVHVFEAGDVSHPRSERIYHELEFLMK 670
            MGL P++AYSWIE RNK+HVF  GDVSHPRSE+IY EL  LMK
Sbjct: 595  MGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMK 637


>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
            predicted protein [Populus trichocarpa]
          Length = 663

 Score =  264 bits (674), Expect = 1e-68
 Identities = 128/223 (57%), Positives = 166/223 (74%)
 Frame = +2

Query: 2    SGFLESASKIFVQMREKDVISLTVMILGYSLHGHGEIGVGLFHKMKKNLNFEIDDVTYDA 181
            SG ++ A K+F +M+++DVIS TVMILG+SLHG GE+GV LF +M+K+   E D  TY A
Sbjct: 344  SGLVDYALKVFERMKKRDVISWTVMILGFSLHGKGELGVELFCRMEKDQRVEADQFTYAA 403

Query: 182  LLRACRTACMVEEGKDFFKCIRETKVEHRCLMISLLVRARLFDEAKDFVEEHHLEWNPDV 361
            +L  C  ACMVEEGK +F CI+E  + H  LM+SLL RA LFDEA+ F+EEHH+E + +V
Sbjct: 404  VLHCCTAACMVEEGKFYFNCIKEPNITHYALMVSLLARACLFDEARAFMEEHHIERHAEV 463

Query: 362  QRALLDGCRIYQDKKMAKQIVERLIELEPLNSDNYVLLSNLYAAYTQWDRVKSSREMITD 541
             RALLDGC ++  + + KQ+ E+L +LEPL+++NYVLLSN Y+   +WD V   RE I  
Sbjct: 464  LRALLDGCWMHHRRNIGKQVFEQLCDLEPLDAENYVLLSNWYSDNGKWDLVDKLRETIMS 523

Query: 542  MGLMPKRAYSWIEVRNKVHVFEAGDVSHPRSERIYHELEFLMK 670
            MG  PK+AYSWIE +NKVHVF  GD+SHPRSERIY EL+ LMK
Sbjct: 524  MGSKPKKAYSWIEFQNKVHVFGTGDISHPRSERIYTELQCLMK 566


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  258 bits (658), Expect = 1e-66
 Identities = 122/223 (54%), Positives = 164/223 (73%)
 Frame = +2

Query: 2   SGFLESASKIFVQMREKDVISLTVMILGYSLHGHGEIGVGLFHKMKKNLNFEIDDVTYDA 181
           SG ++SASK F  M+EKD++S ++M LGYSLHG G++GV LF +M+KN     D++TY A
Sbjct: 310 SGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFKMRRDEITYTA 369

Query: 182 LLRACRTACMVEEGKDFFKCIRETKVEHRCLMISLLVRARLFDEAKDFVEEHHLEWNPDV 361
           +L AC TA MV+EG  +F CI +  V H  L ++LL RA   DEA+ FVE+  L+ +P++
Sbjct: 370 VLHACTTANMVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVEKKKLDKHPEI 429

Query: 362 QRALLDGCRIYQDKKMAKQIVERLIELEPLNSDNYVLLSNLYAAYTQWDRVKSSREMITD 541
            RALLDGCR ++ +K+ K+I+E+L +LEPLN++NY+LLSN YA   +WD V+  RE I D
Sbjct: 430 LRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDMVEKLRETIRD 489

Query: 542 MGLMPKRAYSWIEVRNKVHVFEAGDVSHPRSERIYHELEFLMK 670
           MGL PK+AYSWIE  NK+HVF  GDVSHPRS+ IY  L+ LMK
Sbjct: 490 MGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMK 532


>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  166 bits (419), Expect = 5e-39
 Identities = 85/226 (37%), Positives = 139/226 (61%), Gaps = 5/226 (2%)
 Frame = +2

Query: 2   SGFLESASKIFVQMREKDVISLTVMILGYSLHGHGEIGVGLFHKMKKNLNFEIDDVTYDA 181
           SG+++ A  +F Q+ +++++S   MI GY +HGH +  + LF+KMK +     D++T+  
Sbjct: 312 SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVG 371

Query: 182 LLRACRTACMVEEGKDFFKCIRET-----KVEHRCLMISLLVRARLFDEAKDFVEEHHLE 346
           +L AC    MVEE K+FF  +         V+H   +I +L     F+EA D ++   +E
Sbjct: 372 VLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIE 431

Query: 347 WNPDVQRALLDGCRIYQDKKMAKQIVERLIELEPLNSDNYVLLSNLYAAYTQWDRVKSSR 526
            +  +  ALL+GC+I+++ ++ +  +++LIELEP ++ NYV LSN+YA   +W++    R
Sbjct: 432 PDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEKAARVR 491

Query: 527 EMITDMGLMPKRAYSWIEVRNKVHVFEAGDVSHPRSERIYHELEFL 664
           +++T+ GL    A SWIE++ K H F  GD SHPRS+ IY ELE L
Sbjct: 492 KLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERL 537