BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023698
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]   100   2e-19
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    96   2e-18
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]              94   9e-18
emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]    93   3e-17
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...    91   1e-16

>emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
          Length = 635

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/138 (39%), Positives = 76/138 (55%)
 Frame = +3

Query: 3   RVLVDCGSAVDLLFKGALEEMGMNPKQLRPPRTNLYGFNGSMTEPLGEXXXXXXXXXXXX 182
           R+LVD GS+ DLL    +++MG  P  L  P   L+GFNGS T  LG+            
Sbjct: 494 RILVDPGSSADLLQVAVIKQMGFIPSSLENPERTLFGFNGSSTTSLGDVTLPVQAGPVIL 553

Query: 183 FARFMVVDSASQYNAILGRRWIHEMKAVPSTYYQVIRFPTPTGIHEVRGDQVTAKNSHRS 362
            A F VV+  S +NAILGR W+H MK VPSTY+Q++ F T  G  ++ G Q+ A+  ++ 
Sbjct: 554 NALFSVVEDLSPFNAILGRTWLHGMKVVPSTYHQMVSFITQDGQIDLYGSQLAARQCYQI 613

Query: 363 TVKRLVHGTEEESSHSRK 416
             +    G  ++  HS K
Sbjct: 614 PREA---GPSDDREHSPK 628


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 4/127 (3%)
 Frame = +3

Query: 3   RVLVDCGSAVDLLFKGALEEMGMNPKQLRPPRTNLYGFNGSMTEPLGEXXXXXXXXXXXX 182
           R+L+D GS+VDL+F   LE+MG++   +  P + L  F       LG             
Sbjct: 546 RILIDTGSSVDLIFLSTLEKMGISRGDIVGPPSPLVAFTSESAMSLGTIKLPVLAKKVSK 605

Query: 183 FARFMVVDSASQYNAILGRRWIHEMKAVPSTYYQVIRFPTPTGIHEVRGDQVTAKN---- 350
              F+V D  + YN ILG  WI+ MKAVPSTYYQ I+FPT  G+  +RGDQ  ++     
Sbjct: 606 IVDFVVFDKPAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIRGDQEASRTCYLA 665

Query: 351 SHRSTVK 371
           SHR  ++
Sbjct: 666 SHRVKIQ 672


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/120 (39%), Positives = 69/120 (57%)
 Frame = +3

Query: 3   RVLVDCGSAVDLLFKGALEEMGMNPKQLRPPRTNLYGFNGSMTEPLGEXXXXXXXXXXXX 182
           RVL+D GS+VDL+FK  L  M +  +Q++P    L GF+G     +G             
Sbjct: 631 RVLIDTGSSVDLIFKDVLTAMNITDRQIKPVSKPLAGFDGDFVMTIGTIKLPIFVGGLIA 690

Query: 183 FARFMVVDSASQYNAILGRRWIHEMKAVPSTYYQVIRFPTPTGIHEVRGDQVTAKNSHRS 362
           + +F+V+   + YN ILG  WIH+M+A+PSTY+Q ++FPT  GI  +R  +  AK   RS
Sbjct: 691 WVKFVVIGKPAVYNVILGTPWIHQMQAIPSTYHQCVKFPTHNGIFTLRAPK-EAKTPSRS 749


>emb|CAN80838.1| hypothetical protein VITISV_042541 [Vitis vinifera]
          Length = 508

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/134 (38%), Positives = 74/134 (55%)
 Frame = +3

Query: 3   RVLVDCGSAVDLLFKGALEEMGMNPKQLRPPRTNLYGFNGSMTEPLGEXXXXXXXXXXXX 182
           R+LVD GS+VDL+    +  MG +   L  PR  L GFNGS T  LG+            
Sbjct: 367 RILVDPGSSVDLVQASVVGRMGHSLTSLENPRRILPGFNGSSTTSLGDIVLPVQAGPVTL 426

Query: 183 FARFMVVDSASQYNAILGRRWIHEMKAVPSTYYQVIRFPTPTGIHEVRGDQVTAKNSHRS 362
             +F VV   S +N ILGR W+H MKA+PSTY+Q++ F T  G  ++ G Q+ A+  ++ 
Sbjct: 427 NVQFSVVQDLSSFNVILGRTWLHYMKAIPSTYHQMVSFLTKDGQIDLYGSQLAARQCYQI 486

Query: 363 TVKRLVHGTEEESS 404
           T +    GT +E +
Sbjct: 487 TRET---GTSQEDA 497


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/115 (39%), Positives = 65/115 (56%)
 Frame = +3

Query: 3   RVLVDCGSAVDLLFKGALEEMGMNPKQLRPPRTNLYGFNGSMTEPLGEXXXXXXXXXXXX 182
           RVL+D GS+VDL+F   L  MG++ K ++   + L  F    +  L              
Sbjct: 479 RVLIDTGSSVDLIFLDTLVRMGISKKDIKGALSPLVSFTSETSMLLRTITLPVTAQGIVK 538

Query: 183 FARFMVVDSASQYNAILGRRWIHEMKAVPSTYYQVIRFPTPTGIHEVRGDQVTAK 347
              F V D  + YN ILG  W++EMKAVPSTY+Q ++FPTPTG+ ++ G Q T++
Sbjct: 539 MIEFTVFDRPAAYNIILGTPWLYEMKAVPSTYHQCVKFPTPTGVKQILGSQRTSR 593