BLASTX nr result

ID: Coptis24_contig00023691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023691
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285424.1| PREDICTED: uncharacterized protein LOC100244...    70   2e-10
ref|XP_002315653.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09
ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250...    67   2e-09
emb|CBI20316.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_002284888.1| PREDICTED: uncharacterized protein LOC100258...    65   1e-08

>ref|XP_002285424.1| PREDICTED: uncharacterized protein LOC100244027 [Vitis vinifera]
          Length = 552

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -3

Query: 632 TVCLDIDSGNKIITTSCSCLKVDRMCDPGSQWFKIVNSTSSHTQKL 495
           TVCLDIDS N I+T +C CL  D  CDPGSQWFKIVN+T+  T+ L
Sbjct: 491 TVCLDIDSSNNIVTNACKCLSGDNKCDPGSQWFKIVNATNISTRPL 536


>ref|XP_002315653.1| predicted protein [Populus trichocarpa] gi|222864693|gb|EEF01824.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = -3

Query: 632 TVCLDIDSGNKIITTSCSCLKVDRMCDPGSQWFKIVNSTSSHT 504
           TVCLDIDS N I+T +C CL  D  CDP SQWFK+VNST S T
Sbjct: 467 TVCLDIDSNNTIVTNTCKCLSKDNACDPESQWFKLVNSTRSST 509


>ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250522 isoform 2 [Vitis
           vinifera]
          Length = 596

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -3

Query: 632 TVCLDIDSGNKIITTSCSCLKVDRMCDPGSQWFKIVNST 516
           TVCLD+DS + I+T SC CL  D MCDPGSQWFKI NST
Sbjct: 245 TVCLDVDSSDDIVTNSCKCLSRDDMCDPGSQWFKIANST 283


>emb|CBI20316.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -3

Query: 632 TVCLDIDSGNKIITTSCSCLKVDRMCDPGSQWFKIVNSTS 513
           TVCLD+DS + I+T +C CL  D MCDPGSQWFK+V+ST+
Sbjct: 119 TVCLDVDSSSNIVTDACKCLGRDDMCDPGSQWFKVVDSTN 158


>ref|XP_002284888.1| PREDICTED: uncharacterized protein LOC100258876 isoform 1 [Vitis
           vinifera]
          Length = 509

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -3

Query: 632 TVCLDIDSGNKIITTSCSCLKVDRMCDPGSQWFKIVNSTS 513
           TVCLD+DS + I+T +C CL  D MCDPGSQWFK+V+ST+
Sbjct: 460 TVCLDVDSSSNIVTDACKCLGRDDMCDPGSQWFKVVDSTN 499


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