BLASTX nr result

ID: Coptis24_contig00023671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023671
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510114.1| conserved hypothetical protein [Ricinus comm...    70   6e-10
ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
ref|XP_004163242.1| PREDICTED: uncharacterized protein LOC101224...    65   2e-08
ref|XP_003637290.1| hypothetical protein MTR_080s0045 [Medicago ...    64   3e-08
ref|XP_002302414.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08

>ref|XP_002510114.1| conserved hypothetical protein [Ricinus communis]
           gi|223550815|gb|EEF52301.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
 Frame = +3

Query: 252 RVRVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETE--MDVLPAKKRKRPFWNIFMY 419
           R+ +  RGL KL HD+R CEYEDV +MWEML++TETE      P K +KR FW  F +
Sbjct: 21  RIGIRKRGLLKLRHDVRACEYEDVRIMWEMLRRTETESARQSQPVKSKKRCFWKCFSW 78


>ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|222841401|gb|EEE78948.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 29/62 (46%), Positives = 45/62 (72%)
 Frame = +3

Query: 234 SARLSDRVRVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKRKRPFWNIF 413
           SARL  R R    GL +L +D++TC YEDV VMWE+L+++E+E+     K+++RPFW +F
Sbjct: 17  SARL--RARKNGAGLLELHNDVQTCGYEDVQVMWEILRRSESELMASLPKRKQRPFWRVF 74

Query: 414 MY 419
           ++
Sbjct: 75  VW 76


>ref|XP_004163242.1| PREDICTED: uncharacterized protein LOC101224184 [Cucumis sativus]
          Length = 88

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = +3

Query: 240 RLSDRVRVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKR--KRPFWNIF 413
           R++ R+    RGL KL  D++ CEYEDVHVMWEMLK+ ET+  +  +++R  ++  WNIF
Sbjct: 17  RVACRLGFRKRGLVKLGRDVKACEYEDVHVMWEMLKRNETDQLIGSSERRQKRKSLWNIF 76

Query: 414 MY 419
            +
Sbjct: 77  WW 78


>ref|XP_003637290.1| hypothetical protein MTR_080s0045 [Medicago truncatula]
           gi|355503225|gb|AES84428.1| hypothetical protein
           MTR_080s0045 [Medicago truncatula]
          Length = 161

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = +3

Query: 243 LSDRV--RVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKRKRPFWNIFM 416
           LS R+  R    GL KL  D++TC YEDV VMWEML+KTETE+     K+++ PFW +F+
Sbjct: 85  LSTRINHRKNGAGLVKLQDDVQTCGYEDVQVMWEMLQKTETELVDNHHKRKQLPFWRLFV 144


>ref|XP_002302414.1| predicted protein [Populus trichocarpa] gi|222844140|gb|EEE81687.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 27/60 (45%), Positives = 37/60 (61%)
 Frame = +3

Query: 252 RVRVGNRGLKKLSHDIRTCEYEDVHVMWEMLKKTETEMDVLPAKKRKRPFWNIFMYPHLT 431
           R+ +  RGL KL HD+R CEY DVHVMW+ML++ ETE      K+  +  W+ F +   T
Sbjct: 17  RLWIRKRGLLKLRHDVRACEYADVHVMWKMLRRNETETVQFSRKRENKSLWDCFHWARCT 76


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