BLASTX nr result

ID: Coptis24_contig00023657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023657
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    70   2e-10
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10

>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +1

Query: 7   FINDEDKQLAIDHGPLFLT-SRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKN 180
           F +   K+LA+  GP F   S+ F+++PWS  +      +K+ PIW++L +L  HLW   
Sbjct: 83  FESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNLRLHLWSPE 142

Query: 181 GIDFVSSIIGEPICMDDATARRSRISYARICVVVD 285
            +  ++S++G P+  D  TA R  + +AR+CV VD
Sbjct: 143 ALGKIASLVGRPLFADTVTASRETLCFARVCVEVD 177


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = +1

Query: 4   KFINDEDKQLAIDHGPLFLTSRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKN 180
           +F+N ED++  +  GP  + +   +++ W+P     ++  K +PIWV+L  LP  LW   
Sbjct: 158 RFMNREDRETVMMRGPYTIRNMPIILKEWTPDFNLSKDLEKTMPIWVKLPQLPLCLWGLK 217

Query: 181 GIDFVSSIIGEPICMDDATARRSRISYARICVVVD 285
            ++ + S IG P+  D+ TA++ R+SY RI V VD
Sbjct: 218 SLNKIGSAIGNPLITDECTAQKLRVSYVRILVEVD 252


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   FKFINDEDKQLAIDHGPLFLTSRIFVVRPWSPAVEKYRNGIKALPIWVRLD-LPKHLWMK 177
           F+F  + +  + ++ GP     +  +++ W P     +N I  LP+W+RL  LP  LW K
Sbjct: 440 FRFKTEAEMHVVLEKGPWMFGGKAIILQQWHPHFVFDKNKISKLPVWIRLHGLPFPLWSK 499

Query: 178 NGIDFVSSIIGEPICMDDATARRSRISYARICVVVDTKFKF 300
           +G+   +S+ G+P+  D+ T   + + YA +CV +D    F
Sbjct: 500 SGLSLAASMAGKPLSCDEQTYNCTHLDYAIVCVEIDASLPF 540



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 49  PLFLTSRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKNGIDFVSSIIGEPICM 225
           P     +  +++ W        N I  +P+W+R+ DLP  LW K G+  V+S++G+P+  
Sbjct: 7   PWMFGGKAIILQKWHSGFVFDMNMITKIPVWIRIYDLPFPLWTKEGLSEVASMVGQPLSC 66

Query: 226 DDATARRSRISYARICVVVDTKFKF 300
           D+ T    R+ YAR+CV VD    F
Sbjct: 67  DELTLGCKRLDYARLCVEVDASLPF 91


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
 Frame = +1

Query: 7   FINDEDKQLAIDHGPLFLT-SRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKN 180
           F +   K LA+  GP F   S+ F+++PWS  +      +K+ P+W++L +L  HLW   
Sbjct: 83  FESAHGKVLALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPVWIKLPNLRLHLWSPE 142

Query: 181 GIDFVSSIIGEPICMDDATARRSRISYARICVVVD 285
            +  ++S++G P+  D  TA R  + +AR+CV VD
Sbjct: 143 ALSKIASLVGRPLFADTVTASRETLCFARVCVEVD 177


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +1

Query: 25  KQLAIDHGPLFLTSRI-FVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKNGIDFVS 198
           K+LA+  GP F   R  F+++PWS  +      +K+ PIW++L +L  HLW    +  + 
Sbjct: 89  KELALGEGPRFYDGRKPFILKPWSRDMSLEIEELKSAPIWIKLPNLRLHLWSPEALGKIV 148

Query: 199 SIIGEPICMDDATARRSRISYARICVVVD 285
           S++G P+  D  TA R  + +AR+CV VD
Sbjct: 149 SLVGRPLFADTVTASRETLCFARVCVEVD 177


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