BLASTX nr result

ID: Coptis24_contig00023653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023653
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22616.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8...   271   2e-70
ref|XP_002329680.1| white-brown-complex ABC transporter family [...   269   8e-70
ref|XP_003535589.1| PREDICTED: ABC transporter G family member 8...   268   1e-69
ref|XP_002513627.1| ATP-binding cassette transporter, putative [...   266   6e-69

>emb|CBI22616.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  271 bits (693), Expect = 2e-70
 Identities = 152/268 (56%), Positives = 174/268 (64%)
 Frame = -3

Query: 861 FRKLSAYVPQHDASLPLLTVSETFIFAARLLIPNTSQIPLIVXXXXXXXXXXXXXNTRLA 682
           FRKLSAYVPQHDA LP LTVSETF FAA LL+P +S+I +IV             +TRLA
Sbjct: 113 FRKLSAYVPQHDACLPQLTVSETFAFAASLLVPKSSKIAIIVASLLSELRLTHLAHTRLA 172

Query: 681 SSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTLQSVATSRNRTIILSI 502
             LSGGERRR+SIG            DEPTSGLDS SAFNVMQTLQS+A SR+RT+ILSI
Sbjct: 173 HGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSNSAFNVMQTLQSIAQSRHRTVILSI 232

Query: 501 HQPSFKXXXXXXXXXXXSKGTIVHHXXXXXXXXXXXXXXXTVPPQLNVLEYAMEILNQLC 322
           HQPSFK           SKGT++HH               TVP QLN LEYAMEIL+QL 
Sbjct: 233 HQPSFKILSTIDKVLLLSKGTVIHHGTLSSLETFLLSHGFTVPSQLNSLEYAMEILSQLH 292

Query: 321 EDKSFAXXXXXXXXXXXXXXPNEDAREIIRYKSSRIHEIFTLYGRFWKIIYRTRQLLLTN 142
           E K                 P+  +  +IRY+SSR+HE+  LY RFWKI+YRTRQLLL N
Sbjct: 293 EHKPLTPPSLPPSPEIPEISPSNHSGSMIRYRSSRLHEVLALYNRFWKIVYRTRQLLLVN 352

Query: 141 TLEALVVGTVLGSIYINVGFDKQSIEKR 58
            LEAL VG VLG+IYIN+GFDKQ +EKR
Sbjct: 353 ALEALGVGLVLGTIYINIGFDKQGMEKR 380


>ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]
          Length = 597

 Score =  271 bits (693), Expect = 2e-70
 Identities = 152/268 (56%), Positives = 174/268 (64%)
 Frame = -3

Query: 861 FRKLSAYVPQHDASLPLLTVSETFIFAARLLIPNTSQIPLIVXXXXXXXXXXXXXNTRLA 682
           FRKLSAYVPQHDA LP LTVSETF FAA LL+P +S+I +IV             +TRLA
Sbjct: 105 FRKLSAYVPQHDACLPQLTVSETFAFAASLLVPKSSKIAIIVASLLSELRLTHLAHTRLA 164

Query: 681 SSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTLQSVATSRNRTIILSI 502
             LSGGERRR+SIG            DEPTSGLDS SAFNVMQTLQS+A SR+RT+ILSI
Sbjct: 165 HGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSNSAFNVMQTLQSIAQSRHRTVILSI 224

Query: 501 HQPSFKXXXXXXXXXXXSKGTIVHHXXXXXXXXXXXXXXXTVPPQLNVLEYAMEILNQLC 322
           HQPSFK           SKGT++HH               TVP QLN LEYAMEIL+QL 
Sbjct: 225 HQPSFKILSTIDKVLLLSKGTVIHHGTLSSLETFLLSHGFTVPSQLNSLEYAMEILSQLH 284

Query: 321 EDKSFAXXXXXXXXXXXXXXPNEDAREIIRYKSSRIHEIFTLYGRFWKIIYRTRQLLLTN 142
           E K                 P+  +  +IRY+SSR+HE+  LY RFWKI+YRTRQLLL N
Sbjct: 285 EHKPLTPPSLPPSPEIPEISPSNHSGSMIRYRSSRLHEVLALYNRFWKIVYRTRQLLLVN 344

Query: 141 TLEALVVGTVLGSIYINVGFDKQSIEKR 58
            LEAL VG VLG+IYIN+GFDKQ +EKR
Sbjct: 345 ALEALGVGLVLGTIYINIGFDKQGMEKR 372


>ref|XP_002329680.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222870588|gb|EEF07719.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 593

 Score =  269 bits (687), Expect = 8e-70
 Identities = 156/268 (58%), Positives = 171/268 (63%)
 Frame = -3

Query: 861 FRKLSAYVPQHDASLPLLTVSETFIFAARLLIPNTSQIPLIVXXXXXXXXXXXXXNTRLA 682
           FRKLSAYVPQHDA L LLTVSETF FAARLL P +SQI  IV             N RLA
Sbjct: 101 FRKLSAYVPQHDACLQLLTVSETFTFAARLLNPKSSQIATIVESLLNELNLTHLANARLA 160

Query: 681 SSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTLQSVATSRNRTIILSI 502
             LSGGERRR+SIG            DEPTSGLDS SA NVMQTL+S+ATSR RT+ILSI
Sbjct: 161 HGLSGGERRRVSIGLSLLHDPGILLLDEPTSGLDSKSALNVMQTLKSIATSRYRTVILSI 220

Query: 501 HQPSFKXXXXXXXXXXXSKGTIVHHXXXXXXXXXXXXXXXTVPPQLNVLEYAMEILNQLC 322
           HQPSF            +KGT+VHH               TVPPQLN LEYAMEILNQL 
Sbjct: 221 HQPSFNILSTIDKILLLNKGTVVHHGSLSSLESFLLSNGFTVPPQLNALEYAMEILNQLQ 280

Query: 321 EDKSFAXXXXXXXXXXXXXXPNEDAREIIRYKSSRIHEIFTLYGRFWKIIYRTRQLLLTN 142
           E K                 P+++    IR K SR+HEI  LY RFWKIIYRTRQLLLTN
Sbjct: 281 ESKPNTPPSLPPSPDNSTISPSDNKARSIRNKISRLHEICVLYSRFWKIIYRTRQLLLTN 340

Query: 141 TLEALVVGTVLGSIYINVGFDKQSIEKR 58
           TLEAL+VG VLG+IYIN+G+ KQ IEKR
Sbjct: 341 TLEALIVGLVLGTIYINIGYGKQGIEKR 368


>ref|XP_003535589.1| PREDICTED: ABC transporter G family member 8-like [Glycine max]
          Length = 599

 Score =  268 bits (685), Expect = 1e-69
 Identities = 156/274 (56%), Positives = 172/274 (62%), Gaps = 6/274 (2%)
 Frame = -3

Query: 861 FRKLSAYVPQHDASLPLLTVSETFIFAARLLIPNTSQIPLIVXXXXXXXXXXXXXNTRLA 682
           FRKLS+YVPQHD  LPLLTVSETF+FAA+LL P TS +  IV             NTRLA
Sbjct: 101 FRKLSSYVPQHDHCLPLLTVSETFLFAAKLLKPKTSNLAAIVSSLLSELRLTHLSNTRLA 160

Query: 681 SSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTLQSVATSRNRTIILSI 502
             LSGGERRR+SIG            DEPTSGLDS SAF VM+ L+    SRNRTIILSI
Sbjct: 161 RGLSGGERRRVSIGLCLLHDPAVLLLDEPTSGLDSTSAFKVMRILKQTCVSRNRTIILSI 220

Query: 501 HQPSFKXXXXXXXXXXXSKGTIVHHXXXXXXXXXXXXXXXTVPPQLNVLEYAMEILNQLC 322
           HQPSFK           SKG +VHH               TVP QLN LEYAMEIL+QL 
Sbjct: 221 HQPSFKILACIDRILLLSKGQVVHHGSVATLQAFLHSNGFTVPHQLNALEYAMEILSQLN 280

Query: 321 EDKSFAXXXXXXXXXXXXXXPN------EDAREIIRYKSSRIHEIFTLYGRFWKIIYRTR 160
           E K                  +        +REIIRYKSSR+HEIFTLY RFWKIIYRTR
Sbjct: 281 EAKPVTPPSIPESPERSSSVISVSDGGVRSSREIIRYKSSRVHEIFTLYSRFWKIIYRTR 340

Query: 159 QLLLTNTLEALVVGTVLGSIYINVGFDKQSIEKR 58
           QLLLTNT EAL+VG VLG+IYIN+GFDK+ IEKR
Sbjct: 341 QLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKR 374


>ref|XP_002513627.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223547535|gb|EEF49030.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 442

 Score =  266 bits (679), Expect = 6e-69
 Identities = 153/269 (56%), Positives = 170/269 (63%), Gaps = 2/269 (0%)
 Frame = -3

Query: 861 FRKLSAYVPQHDASLPLLTVSETFIFAARLLIPNTSQIPLIVXXXXXXXXXXXXXNTRLA 682
           FRKLSAYVPQHDA LP+LTVSETFIF   LL P +S+I   V             N RLA
Sbjct: 126 FRKLSAYVPQHDACLPMLTVSETFIFTGHLLHPKSSEIATTVDSLLRELNLTHLANARLA 185

Query: 681 SSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTLQSVATSRNRTIILSI 502
             LSGGERRR+SIG            DEPTSGLDS SA NVMQTL+S+ATSR RT+ILSI
Sbjct: 186 IGLSGGERRRVSIGLSLLQDPRFLLLDEPTSGLDSKSALNVMQTLKSIATSRLRTVILSI 245

Query: 501 HQPSFKXXXXXXXXXXXSKGTIVHHXXXXXXXXXXXXXXXTVPPQLNVLEYAMEILNQLC 322
           HQPSFK           SKGT+VHH               TVPPQLN LEYAMEILNQL 
Sbjct: 246 HQPSFKILSTIDNILLLSKGTVVHHGTLFSLQSFLLSNGFTVPPQLNALEYAMEILNQLQ 305

Query: 321 EDKSFAXXXXXXXXXXXXXXPN--EDAREIIRYKSSRIHEIFTLYGRFWKIIYRTRQLLL 148
           E                    +  ++    +RY+SSRIHEI  LY RFWKIIYRTRQLLL
Sbjct: 306 ESNPCTPSSLPPSSDDDAAITSPCDNKARDVRYRSSRIHEILVLYSRFWKIIYRTRQLLL 365

Query: 147 TNTLEALVVGTVLGSIYINVGFDKQSIEK 61
           TNTLEAL+VG VLG+IYIN+G+DKQ IEK
Sbjct: 366 TNTLEALIVGLVLGTIYINIGYDKQGIEK 394


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