BLASTX nr result

ID: Coptis24_contig00023641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023641
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271781.2| PREDICTED: putative clathrin assembly protei...   164   1e-38
emb|CBI36596.3| unnamed protein product [Vitis vinifera]              160   2e-37
gb|ABR16117.1| unknown [Picea sitchensis]                             156   2e-36
ref|XP_003549739.1| PREDICTED: putative clathrin assembly protei...   135   4e-30
ref|XP_003609412.1| hypothetical protein MTR_4g115420 [Medicago ...   131   1e-28

>ref|XP_002271781.2| PREDICTED: putative clathrin assembly protein At5g35200-like [Vitis
           vinifera]
          Length = 542

 Score =  164 bits (414), Expect = 1e-38
 Identities = 84/166 (50%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
 Frame = -3

Query: 601 IIDLLGLDEISQDATELEEKNAHALAIINSEDPLNA---INVPVESTGWEVALVTTPSSN 431
           + +LL LDE+ ++A+EL+EKNA  +AI  SE+P N+   +N+  ++TGWE+ALVT PSS+
Sbjct: 369 VTELLDLDELIKEASELDEKNALGVAIFTSENPSNSANGLNLSCQTTGWELALVTAPSSS 428

Query: 430 STVVAESKLAGGLDKLTLDSLYEDAMARRTNQNGTYHTGQVAPNPFEITQYMHDPFYASN 251
              VAESKLAGG+DKLTLDSLY+DA+A R NQN TYH GQ+  NPFE+     DPFYAS+
Sbjct: 429 GAAVAESKLAGGMDKLTLDSLYDDAIAGRANQNRTYHMGQLGSNPFELANSTRDPFYASS 488

Query: 250 DVAPPSNVXXXXXXXXXXXXXXXXXXXXXXQSVAGQNPTNPFGNPY 113
           ++AP +NV                      Q + G++PTNPFGNP+
Sbjct: 489 NIAPSTNV--EMAGITQQEEGLMMQQQQYRQPLIGEDPTNPFGNPF 532


>emb|CBI36596.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  160 bits (404), Expect = 2e-37
 Identities = 83/163 (50%), Positives = 110/163 (67%), Gaps = 3/163 (1%)
 Frame = -3

Query: 592 LLGLDEISQDATELEEKNAHALAIINSEDPLNA---INVPVESTGWEVALVTTPSSNSTV 422
           L  LDE+ ++A+EL+EKNA  +AI  SE+P N+   +N+  ++TGWE+ALVT PSS+   
Sbjct: 340 LQDLDELIKEASELDEKNALGVAIFTSENPSNSANGLNLSCQTTGWELALVTAPSSSGAA 399

Query: 421 VAESKLAGGLDKLTLDSLYEDAMARRTNQNGTYHTGQVAPNPFEITQYMHDPFYASNDVA 242
           VAESKLAGG+DKLTLDSLY+DA+A R NQN TYH GQ+  NPFE+     DPFYAS+++A
Sbjct: 400 VAESKLAGGMDKLTLDSLYDDAIAGRANQNRTYHMGQLGSNPFELANSTRDPFYASSNIA 459

Query: 241 PPSNVXXXXXXXXXXXXXXXXXXXXXXQSVAGQNPTNPFGNPY 113
           P +NV                      Q + G++PTNPFGNP+
Sbjct: 460 PSTNV--EMAGITQQEEGLMMQQQQYRQPLIGEDPTNPFGNPF 500


>gb|ABR16117.1| unknown [Picea sitchensis]
          Length = 547

 Score =  156 bits (395), Expect = 2e-36
 Identities = 99/188 (52%), Positives = 113/188 (60%), Gaps = 13/188 (6%)
 Frame = -3

Query: 595 DLLGLDEISQDATELEEKNAHALAIINSEDPLN------AINVPVESTGWEVALVTTPSS 434
           DLLG D+IS D + LEEKNA ALAI+ + D  +      A ++P  +TGWE+ALVTT SS
Sbjct: 363 DLLGFDDISPDPSSLEEKNALALAIVPTTDNSSNGTSNSARDIPNGATGWELALVTTSSS 422

Query: 433 NSTVVAESKLAGGLDKLTLDSLYEDAMARRTNQNGTYHTGQVAPNPFEITQYM---HDPF 263
           NS+V AESKLAGG DKLTLDSLYEDAM   T Q  +YHTGQVAPNPFE +  M   HDPF
Sbjct: 423 NSSVQAESKLAGGFDKLTLDSLYEDAM---TRQVSSYHTGQVAPNPFEASPMMQPGHDPF 479

Query: 262 YASNDVAPPSNVXXXXXXXXXXXXXXXXXXXXXXQSVAGQNPTNPFGNPYDGQDVQAG-- 89
           YAS  VAPPS V                      Q +  Q P NPFGNPY      A   
Sbjct: 480 YASQKVAPPSAV------QMASMAQQQQAFMAQQQMMGQQLPANPFGNPYTAAYPYAAGT 533

Query: 88  --QSQSPY 71
             Q+Q PY
Sbjct: 534 PYQAQYPY 541


>ref|XP_003549739.1| PREDICTED: putative clathrin assembly protein At5g35200-like
           [Glycine max]
          Length = 548

 Score =  135 bits (341), Expect = 4e-30
 Identities = 87/191 (45%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
 Frame = -3

Query: 604 PIIDLLGLDEISQDATELEEKNAHALAIIN---SEDPLNAINVPVESTGWEVALVTTPSS 434
           P  DLL L++    A ELEEKNA ALAI+     + P  A N    +TGWE+ALVT PSS
Sbjct: 359 PPPDLLNLEDPVPAAAELEEKNALALAIVPVAVEQQPSAASNQANGTTGWELALVTAPSS 418

Query: 433 NSTVVAESKLAGGLDKLTLDSLYEDAMARRTNQNGTYHTGQVAPNPFEITQYMHDPFYAS 254
           N T  A SKLAGGLDKLTLDSLY+DA+ RR NQN +Y+  + AP    +   MHDPF+AS
Sbjct: 419 NETATAASKLAGGLDKLTLDSLYDDAL-RRNNQNVSYNPWEPAPGGNMMQPTMHDPFFAS 477

Query: 253 NDVAPPSNVXXXXXXXXXXXXXXXXXXXXXXQSVAGQNPTNPFGNPYDGQDV------QA 92
           N VA P +V                           Q   NPFGNPY    V        
Sbjct: 478 NTVAAPPSVQMAAMSNQQQTFMFQHQQQQQMMMPPQQQSVNPFGNPYGAAAVHPYGSGMP 537

Query: 91  GQSQSPYTSFI 59
            QS +PYT  I
Sbjct: 538 VQSYNPYTGLI 548


>ref|XP_003609412.1| hypothetical protein MTR_4g115420 [Medicago truncatula]
           gi|355510467|gb|AES91609.1| hypothetical protein
           MTR_4g115420 [Medicago truncatula]
          Length = 545

 Score =  131 bits (329), Expect = 1e-28
 Identities = 83/194 (42%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
 Frame = -3

Query: 610 TPPII---DLLGLDEISQDATELEEKNAHALAIINSEDPLNAINVPVEST-GWEVALVTT 443
           TPP+    DLL +++    A ELEEKNA ALAI+ ++   +A++     T GWE+ALVT 
Sbjct: 353 TPPVQPPPDLLNMEDPVPAAAELEEKNALALAIVPADQQPSAVSNHANGTAGWELALVTA 412

Query: 442 PSSNSTVVAESKLAGGLDKLTLDSLYEDAMARRTNQNGTYHTGQVAPNPFEITQYMHDPF 263
           PSSN +  A SKLAGGLD LTLDSLY+DA+ RR NQN +Y+  + AP    +   MHDPF
Sbjct: 413 PSSNESAAAASKLAGGLDMLTLDSLYDDAL-RRNNQNASYNPWEQAPAGGMMQPTMHDPF 471

Query: 262 YASNDVAPPSNVXXXXXXXXXXXXXXXXXXXXXXQSVAGQNPTNPFGNPYDGQDV----- 98
           +ASN +A P +V                           Q   NPFGNP  G  V     
Sbjct: 472 FASNTMAAPHSVQMAAMSNQQQAFMYQQQQQQMMTMAPQQQSANPFGNPQYGATVHPYGS 531

Query: 97  -QAGQSQSPYTSFI 59
               QS +PYT  I
Sbjct: 532 GMPVQSYNPYTGLI 545


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