BLASTX nr result

ID: Coptis24_contig00023633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023633
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003325657.2| hypothetical protein PGTG_06859 [Puccinia gr...    58   9e-07
ref|XP_003328314.2| hypothetical protein PGTG_09608 [Puccinia gr...    57   2e-06
ref|XP_003337812.2| hypothetical protein PGTG_19411 [Puccinia gr...    57   2e-06

>ref|XP_003325657.2| hypothetical protein PGTG_06859 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3] gi|375165868|gb|EFP81238.2|
           hypothetical protein PGTG_06859 [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 401

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
 Frame = -1

Query: 287 LQLS*LSEARMTYQLQEKSAFSLDHCYVILKDNPKWSNVFEARSSRPTKGK--GRKNDGE 114
           ++++ L+EA+  Y+   +S+F+LDHC+ ILKD PKW    +   +R  KGK  G      
Sbjct: 155 MKIAKLTEAKELYKATFESSFNLDHCWGILKDTPKWQATQQENEARNKKGKQSGAAPPSS 214

Query: 113 DSTSNSPSVGGVELEGSQEIERPKEM---ERPLGSKKAK 6
           D  S++P+   +E+E  +E E  + +    R  G K AK
Sbjct: 215 DIPSSTPATSAIEVE-DEESEASRSVLGNSRSEGQKAAK 252


>ref|XP_003328314.2| hypothetical protein PGTG_09608 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3] gi|375167630|gb|EFP83895.2|
           hypothetical protein PGTG_09608 [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 397

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
 Frame = -1

Query: 272 LSEARMTYQLQEKSAFSLDHCYVILKDNPKWSNVFEARSSRPTKGK--GRKNDGEDSTSN 99
           L+EA+  Y+   +S+F+LDHC+ ILKD PKW    +   +R  KGK  G      D  S+
Sbjct: 156 LTEAKELYKATFESSFNLDHCWGILKDTPKWQATQQENEARNKKGKQSGAAPPSSDIPSS 215

Query: 98  SPSVGGVELEGSQEIERPKEM---ERPLGSKKAK 6
           +P+   +E+E  +E E  + +    R  G K AK
Sbjct: 216 TPATSAIEVE-DEESEASRSVLGNSRSEGQKAAK 248


>ref|XP_003337812.2| hypothetical protein PGTG_19411 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3] gi|375165069|gb|EFP93393.2|
           hypothetical protein PGTG_19411 [Puccinia graminis f.
           sp. tritici CRL 75-36-700-3]
          Length = 383

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
 Frame = -1

Query: 272 LSEARMTYQLQEKSAFSLDHCYVILKDNPKWSNVFEARSSRPTKGK--GRKNDGEDSTSN 99
           L+EA+  Y+   +S+F+LDHC+ ILKD PKW    +   +R  KGK  G      D  S+
Sbjct: 156 LTEAKELYKATFESSFNLDHCWGILKDTPKWQATQQENEARNKKGKQSGAAPPSSDIPSS 215

Query: 98  SPSVGGVELEGSQEIERPKEM---ERPLGSKKAK 6
           +P+   +E+E  +E E  + +    R  G K AK
Sbjct: 216 TPATSAIEVE-DEESEASRSVLGNSRSEGQKAAK 248


Top