BLASTX nr result

ID: Coptis24_contig00023623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023623
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267590.1| PREDICTED: uncharacterized protein LOC100243...    88   8e-16
ref|XP_002529729.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_003516703.1| PREDICTED: uncharacterized protein LOC100775...    65   7e-09
ref|XP_002509798.1| conserved hypothetical protein [Ricinus comm...    63   3e-08

>ref|XP_002267590.1| PREDICTED: uncharacterized protein LOC100243390 [Vitis vinifera]
          Length = 301

 Score = 88.2 bits (217), Expect = 8e-16
 Identities = 59/167 (35%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
 Frame = +1

Query: 4   NVKRGTPKHHMKEIFASELKTGSEFVSTLVDXXXXXXXXXXXXXXXPLGTVPPQVISKSV 183
           NVKRGTPK HMKEI     K     VS   +                +       I+ S 
Sbjct: 138 NVKRGTPKGHMKEICP---KVKPSPVSKHTNPMPQNAADPQTVHQNEVEVCKTDEIASSA 194

Query: 184 PH------NSKIHPDLAKEIRAEKSAATPKERTKLFLSKGKKRKNISPGSKEQVENENKI 345
                   +S   P +A +     S ATP  RT   L  GK+RK   PGS +Q E E+  
Sbjct: 195 TALDIPIIDSPATPTVATDTPITNSPATPLVRTGNTLLGGKRRKRNKPGSSKQAEPESNS 254

Query: 346 MTPNAEKVVGESSRKRRKGWSSLKKIAETSGSENNRNISTIVLPFFM 486
            + + +K V  S+++RRK W+SL++IAETS   N RNI+ + +PFF+
Sbjct: 255 ASADTQKSVSTSNKRRRKSWTSLREIAETSEQGNTRNIANLTIPFFL 301


>ref|XP_002529729.1| conserved hypothetical protein [Ricinus communis]
           gi|223530793|gb|EEF32658.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 290

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
 Frame = +1

Query: 1   RNVKRGTPKHHMKEIFASELKTGSEFVSTLVDXXXXXXXXXXXXXXXPLGTVPPQVIS-- 174
           RN+KRG  K +MKEI+ S+ K      S                   P  ++P + +S  
Sbjct: 141 RNLKRGCAKGYMKEIWPSKPKQKPSAESK------------------PSKSIPERSVSLE 182

Query: 175 -------KSVPHNSKIHPDLAKEIRAEKSAATPKERTKLFLSKGKKRKNISPGSKEQVEN 333
                  + V  +    P L+ +     S ATP  ++   L   K+RK    G+KE   N
Sbjct: 183 NVSGIKDEMVKMDEITLPPLSGDTCITNSPATPLVKSGATLLDAKRRKRNKSGAKETDSN 242

Query: 334 ENKIMTPNAEKVVGESSRKRRKGWSSLKKIAETSGSENNRNISTIVLPFFM 486
           +    + ++E+ V  SS+++RK W+SLK+IAE+   ++ RN++ + +PF +
Sbjct: 243 K---ASKDSERTVNASSKRKRKSWTSLKEIAESKEHDSTRNVTNLTIPFLI 290


>ref|XP_003516703.1| PREDICTED: uncharacterized protein LOC100775737 [Glycine max]
          Length = 282

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
 Frame = +1

Query: 1   RNVKRGTPKHHMKEIFASELKTGSEFVSTLVDXXXXXXXXXXXXXXXPLGTVPPQVISKS 180
           +N+KRGT K H+K I  S+ K+  E     +                    +   ++SK 
Sbjct: 133 QNLKRGTLKGHIKGICPSKDKSLLELTPPSISITSDS------------SKLEKAIVSKD 180

Query: 181 VPHNSKIHPD--LAKEIRAEKSAATPKERTKLFLSKGKKRKNISPGSKEQVENENKIMTP 354
             +   + P   +AK+I      ATP       L +GKKR+  S  SK  ++  NK    
Sbjct: 181 ESNEIHLFPSRVVAKDITLVNGLATPSSTNTTTLLEGKKRRRESSLSKNAIKTINK-SAK 239

Query: 355 NAEKVVGESSRKRRKGWSSLKKIAETSGSENNRNISTIVLPFFM 486
              K    SS++RRK W+SLK+IA+++  + N+ I+ + +PF++
Sbjct: 240 EVAKSTSTSSKRRRKSWTSLKEIAQSNEHKKNQ-IANLTIPFYL 282


>ref|XP_002509798.1| conserved hypothetical protein [Ricinus communis]
           gi|223549697|gb|EEF51185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 293

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
 Frame = +1

Query: 1   RNVKRGTPKHHMKEIFASELKTGSEFVSTLVDXXXXXXXXXXXXXXXPLGTVPPQVIS-- 174
           +N+KRG+ K +MKEI  S+ K      S                   P   +P + +S  
Sbjct: 141 QNLKRGSTKGYMKEICPSKPKQKPSARSK------------------PSKPMPEKSVSLE 182

Query: 175 -------KSVPHNSKIHPDLAKEIRAEKSAATPKERTKLFLSKGKKRKNISPGSKEQVEN 333
                  + V  +    P L  +     S+ TP  ++   L   K+RK    G+K   E+
Sbjct: 183 DVSEIKDEMVNMDEIALPPLFGDTCITNSSPTPLVKSGATLLDAKRRKRNRSGAKRSEES 242

Query: 334 ENKIMTPNAEKVVGESSRKRRKGWSSLKKIAETSGSENNRNISTIVLPFFM 486
           +N     + E+    SS+++RK W+SLK+IAE+   ++ +N++ + +PFF+
Sbjct: 243 DNTNAAKDGERTGNASSKRKRKSWTSLKEIAESKEHDSTQNVANLAIPFFI 293


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