BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023613
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 84   1e-14
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               81   1e-13
ref|XP_003626523.1| hypothetical protein MTR_7g116830 [Medicago ...    78   6e-13
ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_003620829.1| Glutamate receptor 3.6 [Medicago truncatula]...    65   6e-09

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 38/93 (40%), Positives = 57/93 (61%)
 Frame = -2

Query: 286 NPFVSSFQNLSFHNICNLISIKLDRENYILWKSVFKPILRNFNLLNLVTGRERCPDQFLI 107
           NP + +   +S  N+  ++  KL+R+NYI W+S+F P+L+ F L+ LV G + CP  F+ 
Sbjct: 256 NPPIMTLGTISITNVAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVR 315

Query: 106 DQRGNLTNQVNPDYIDWIRRDQTLLIWMNATLS 8
           D  G  T   N  +  W  RDQ L+IW+N+TLS
Sbjct: 316 DPSG--TCVPNASFETWCERDQILMIWINSTLS 346


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/80 (46%), Positives = 52/80 (65%)
 Frame = -2

Query: 247 NICNLISIKLDRENYILWKSVFKPILRNFNLLNLVTGRERCPDQFLIDQRGNLTNQVNPD 68
           ++ N ++IKLDR NY LW +   PIL++  L   V G   CP  FL D+ G LT+QVNPD
Sbjct: 12  SVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKAGQLTDQVNPD 71

Query: 67  YIDWIRRDQTLLIWMNATLS 8
           +  WI +DQ +L W+N +L+
Sbjct: 72  FEPWILQDQMVLSWINGSLT 91


>ref|XP_003626523.1| hypothetical protein MTR_7g116830 [Medicago truncatula]
            gi|355501538|gb|AES82741.1| hypothetical protein
            MTR_7g116830 [Medicago truncatula]
          Length = 1157

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = -2

Query: 286  NPFVSSFQNLSFHN-ICNLISIKLDRENYILWKSVFKPILRNFNLLNLVTGRERCPDQFL 110
            +P +SS  N +  N I  ++ +KLDR+NY LWKS+  P++R + L   + G + CPDQF+
Sbjct: 840  DPIMSSAANTNQKNDIPTIVYVKLDRDNYPLWKSLVLPLIRGYKLDVYMLGTKACPDQFI 899

Query: 109  IDQRGNLTNQVNPDYIDWIRRDQTLLIWM 23
                G  T + NPD  DWI RDQ LL W+
Sbjct: 900  TS--GETTKKANPDQDDWIARDQALLGWL 926


>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/75 (45%), Positives = 49/75 (65%)
 Frame = -2

Query: 232 ISIKLDRENYILWKSVFKPILRNFNLLNLVTGRERCPDQFLIDQRGNLTNQVNPDYIDWI 53
           +SIKLDR NY LW +   PIL++ NL+  VTG   CP +F  +  G +T +V+P Y  W 
Sbjct: 19  MSIKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFKSNTDGTITTEVDPRYATWH 78

Query: 52  RRDQTLLIWMNATLS 8
           ++DQ +L W+N +LS
Sbjct: 79  QQDQMILSWINNSLS 93


>ref|XP_003620829.1| Glutamate receptor 3.6 [Medicago truncatula]
           gi|355495844|gb|AES77047.1| Glutamate receptor 3.6
           [Medicago truncatula]
          Length = 408

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/89 (31%), Positives = 57/89 (64%)
 Frame = -2

Query: 274 SSFQNLSFHNICNLISIKLDRENYILWKSVFKPILRNFNLLNLVTGRERCPDQFLIDQRG 95
           S+ Q +  +++ + IS+KLDREN+ LWKS+  P+++   L   + G ++ P+Q++     
Sbjct: 3   SAAQTIQKNDLPSTISVKLDRENFPLWKSLVLPLIKGSKLDGYLLGTKQRPEQYITSTDP 62

Query: 94  NLTNQVNPDYIDWIRRDQTLLIWMNATLS 8
           N + ++NP++ DW+  DQ +L W+  +++
Sbjct: 63  N-SKKINPEFEDWLAHDQQVLGWLRNSMT 90