BLASTX nr result

ID: Coptis24_contig00023611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023611
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324983.1| predicted protein [Populus trichocarpa] gi|2...    59   7e-07
ref|XP_003633125.1| PREDICTED: arabinogalactan peptide 16-like [...    57   2e-06
ref|XP_002514323.1| conserved hypothetical protein [Ricinus comm...    55   9e-06

>ref|XP_002324983.1| predicted protein [Populus trichocarpa] gi|222866417|gb|EEF03548.1|
           predicted protein [Populus trichocarpa]
          Length = 63

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/46 (67%), Positives = 33/46 (71%)
 Frame = -2

Query: 461 SSMRLHATPILVLFFLALSHLCHGQGIAPSPAPEGPISDGNTIDQG 324
           SSMRLHA PI+   FLAL     GQG APSPA EGP +DG TIDQG
Sbjct: 2   SSMRLHALPIIGFMFLALLEFGFGQGTAPSPA-EGPTNDGKTIDQG 46


>ref|XP_003633125.1| PREDICTED: arabinogalactan peptide 16-like [Vitis vinifera]
          Length = 64

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = -2

Query: 455 MRLHATPILVLFFLALSHLCHGQGIAPSPAPEGPISDGNTIDQG 324
           ++ +A PI+ L  LAL     GQGIAPSPAP+GP SDG+TIDQG
Sbjct: 4   IKFYAFPIVGLVLLALLEGSRGQGIAPSPAPQGPFSDGSTIDQG 47


>ref|XP_002514323.1| conserved hypothetical protein [Ricinus communis]
           gi|223546779|gb|EEF48277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 65

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = -2

Query: 467 MASSMRLHATPILVLFFLALSHLCHGQGIAPSPAPEGPISDGNTIDQG 324
           M++ M+L+A PI+ L   AL  + + Q +APSPA EGP SDGN+IDQG
Sbjct: 1   MSTPMKLYALPIIGLVIFALFQIGYAQTMAPSPAAEGPSSDGNSIDQG 48


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