BLASTX nr result
ID: Coptis24_contig00023605
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00023605
(1559 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like... 392 e-106
ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|2... 392 e-106
emb|CBI25868.3| unnamed protein product [Vitis vinifera] 384 e-104
ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc... 384 e-104
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like... 374 e-101
>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
Length = 964
Score = 392 bits (1008), Expect = e-106
Identities = 248/522 (47%), Positives = 290/522 (55%), Gaps = 3/522 (0%)
Frame = -2
Query: 1558 KEIRKTNKVDVEDLTVENGLFKLFERN*EDE*SGC*GFDCGEWFV*VV**DCQKTVGSYL 1379
KE+RKTNKVDV+DLTVENGLFK F+ ++ +
Sbjct: 228 KEMRKTNKVDVDDLTVENGLFKSFDEI------------------------VRRQLDPIW 263
Query: 1378 AYFG*EDKTACYGFEDFEETAGLSC*LFRYDAVTYLKYLDTLRVSEGVRSVWIFADSSYK 1199
G + K D + L L RYDAV+YLKYLD+LR SE +RSVWIFA+SSYK
Sbjct: 264 HTLGKKTKQLV---SDLKTLRKLLDYLVRYDAVSYLKYLDSLRASENIRSVWIFAESSYK 320
Query: 1198 IFELAKKRVYQLVRSDGVKVSAXXXXXXXXXXXXXXDQYNEKEVKGGSADTSXXXXXXXX 1019
IFE AKKRVY VRSDG K+ N+ E G S
Sbjct: 321 IFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNN---NKNEANGDSVLVGTNGGVVLE 377
Query: 1018 XXXXXAPKWXXXXXXXXXXXXXXXXQATIGKEC-VENVEDDSFIVLVACKDERSCMQMED 842
+PKW QA+ ++ E EDDS IVLVACKDERSCMQ+ED
Sbjct: 378 EVLEESPKWKVLREVLKEIEEEREQQASSREDASAEGDEDDSGIVLVACKDERSCMQLED 437
Query: 841 CIKKGPRQVMREEWEKYLRSKAELHSFQTRSKKK-KDPKGFGILNGVVHTMSRENADPTS 665
IK P++VMREEWEKYL SK EL QTR K K K+PKGFGILNG V + S +N +PTS
Sbjct: 438 FIKSDPQKVMREEWEKYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTS 497
Query: 664 VNKLEHDALLAAASEVSGIDTKEVIVGDDPQPSAXXXXXXXXXXXXXXXXXXGPTNXXXX 485
++KLEHDAL+AAAS +S + K+ V D+ QP G
Sbjct: 498 ISKLEHDALMAAASVIS-LAKKDTAVSDNSQPHIGSGGRGKGRGKGRNIKITGKAQVSGH 556
Query: 484 XXXXXXXXXPETSKLEVSGSENKGPEIATGPVEDGFSHERLLTRPSINKGVLRKHTQEVN 305
K EV GSEN S K + KH QE +
Sbjct: 557 KVNNSNSEQGRNDKSEVFGSEN----------------------DSQGKEIDPKHCQETD 594
Query: 304 GTDCLNAKPLPPVHFYALENNR-DILDIVKPSVVIVYHPDMTFVREVEIYKAENPSKLLK 128
NAK LP VHFYALE+ + +ILD++KPS+VIVYHPDMTFVRE+EIYK ENPSK LK
Sbjct: 595 APSFSNAKQLPLVHFYALESEKSNILDVLKPSIVIVYHPDMTFVREIEIYKTENPSKKLK 654
Query: 127 VYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPTNQ 2
VYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIP +Q
Sbjct: 655 VYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPVDQ 696
Score = 123 bits (309), Expect = 1e-25
Identities = 59/64 (92%), Positives = 63/64 (98%)
Frame = -3
Query: 1494 SCLKEIRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGRKTKQLVMDLKTLRKLL 1315
+CLKE+RKTNKVDV+DLTVENGLFKSFDEIVRRQLDPIWHTLG+KTKQLV DLKTLRKLL
Sbjct: 225 ACLKEMRKTNKVDVDDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLL 284
Query: 1314 DYLV 1303
DYLV
Sbjct: 285 DYLV 288
>ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|222834003|gb|EEE72480.1|
predicted protein [Populus trichocarpa]
Length = 982
Score = 392 bits (1007), Expect = e-106
Identities = 238/525 (45%), Positives = 299/525 (56%), Gaps = 6/525 (1%)
Frame = -2
Query: 1558 KEIRKTNKVDVEDLTVENGLFKLFERN*EDE*SGC*GFDCGEWFV*VV**DCQKTVGSYL 1379
KE+RK+NKVDVEDLTVENGLFK F+ ++ +
Sbjct: 231 KEVRKSNKVDVEDLTVENGLFKSFDEI------------------------VRRQLDPIW 266
Query: 1378 AYFG*EDKTACYGFEDFEETAGLSC*LFRYDAVTYLKYLDTLRVSEGVRSVWIFADSSYK 1199
G + K D + L L RYDAV+YLKYLDTLRVS+ +SVWIFA+ SYK
Sbjct: 267 HTLGKKTKQLV---SDLKTLRKLLDYLVRYDAVSYLKYLDTLRVSQSFQSVWIFAEPSYK 323
Query: 1198 IFELAKKRVYQLVRSDGVKVSAXXXXXXXXXXXXXXDQYNEKEVKGGSADTSXXXXXXXX 1019
IF+ AKKRV++L RS VK++ D NE E G S+ T+
Sbjct: 324 IFDYAKKRVFRLTRSSDVKLNEQSKNKVGKKRKLKGDDSNEGEADGTSSSTTSSGVVLEE 383
Query: 1018 XXXXXAPKWXXXXXXXXXXXXXXXXQATIGKECVENVEDDSFIVLVACKDERSCMQMEDC 839
PKW + ++ VE+ D+ IVLVACKDE SCMQ+EDC
Sbjct: 384 VLEEA-PKWKVLREILEEIGEERQRVESGEEDQVESEGVDNGIVLVACKDECSCMQLEDC 442
Query: 838 IKKGPRQVMREEWEKYLRSKAELHSFQTRSKKK-----KDPKGFGILNGVVHTMSRENAD 674
I PR+V++EEW+KYL SK EL KKK K+PKGFGIL+GVV + ++A+
Sbjct: 443 IMHSPRKVLQEEWKKYLLSKVELGGLPAPEKKKAKLKPKEPKGFGILDGVVPVTTVQSAE 502
Query: 673 PTSVNKLEHDALLAAASEVSGIDTKEVIVGDDPQPSAXXXXXXXXXXXXXXXXXXGPTNX 494
+S NK EHD LL AAS++ + ++V D+ QP A T
Sbjct: 503 ASSTNKQEHDVLLVAASKIRNQYKRGLVVEDELQPLADSSKKGAKEKGKEHKKRGQATGQ 562
Query: 493 XXXXXXXXXXXXPETSKL-EVSGSENKGPEIATGPVEDGFSHERLLTRPSINKGVLRKHT 317
L E+SGS+NK + +E L R S+NKG L++H
Sbjct: 563 DSGSKDNDSNIDTVIKDLPEISGSKNKSQTVENDQAAIDGYYEANLQRASVNKGALQRHA 622
Query: 316 QEVNGTDCLNAKPLPPVHFYALENNRDILDIVKPSVVIVYHPDMTFVREVEIYKAENPSK 137
+E+ T NAKP+PPVHF+ALE+++ ILDI+KPSVVIVYHPDM FVRE+E+YKAENPSK
Sbjct: 623 EELGLTGSRNAKPIPPVHFHALESDQPILDILKPSVVIVYHPDMMFVREIEVYKAENPSK 682
Query: 136 LLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPTNQ 2
LKVYF+FYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIP +Q
Sbjct: 683 KLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPVDQ 727
Score = 124 bits (310), Expect = 9e-26
Identities = 59/64 (92%), Positives = 63/64 (98%)
Frame = -3
Query: 1494 SCLKEIRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGRKTKQLVMDLKTLRKLL 1315
+CLKE+RK+NKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLG+KTKQLV DLKTLRKLL
Sbjct: 228 ACLKEVRKSNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLL 287
Query: 1314 DYLV 1303
DYLV
Sbjct: 288 DYLV 291
>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
Length = 1195
Score = 384 bits (987), Expect = e-104
Identities = 246/522 (47%), Positives = 288/522 (55%), Gaps = 3/522 (0%)
Frame = -2
Query: 1558 KEIRKTNKVDVEDLTVENGLFKLFERN*EDE*SGC*GFDCGEWFV*VV**DCQKTVGSYL 1379
KE+RKTNKVDV+DLTVENGLFK F+ ++ +
Sbjct: 462 KEMRKTNKVDVDDLTVENGLFKSFDEI------------------------VRRQLDPIW 497
Query: 1378 AYFG*EDKTACYGFEDFEETAGLSC*LFRYDAVTYLKYLDTLRVSEGVRSVWIFADSSYK 1199
G + K D + L L RYDAV+YLKYLD+LR SE +RSVWIFA+SSYK
Sbjct: 498 HTLGKKTKQLV---SDLKTLRKLLDYLVRYDAVSYLKYLDSLRASENIRSVWIFAESSYK 554
Query: 1198 IFELAKKRVYQLVRSDGVKVSAXXXXXXXXXXXXXXDQYNEKEVKGGSADTSXXXXXXXX 1019
IFE AKKRVY VRSDG K+ N+ E G S
Sbjct: 555 IFEYAKKRVYHFVRSDGGKLGGQNKSVTNKKRKLNN---NKNEANGDSVLVGTNGGVVLE 611
Query: 1018 XXXXXAPKWXXXXXXXXXXXXXXXXQATIGKEC-VENVEDDSFIVLVACKDERSCMQMED 842
+PKW QA+ ++ E EDDS IVLVACKDERSCMQ+ED
Sbjct: 612 EVLEESPKWKVLREVLKEIEEEREQQASSREDASAEGDEDDSGIVLVACKDERSCMQLED 671
Query: 841 CIKKGPRQVMREEWEKYLRSKAELHSFQTRSKKK-KDPKGFGILNGVVHTMSRENADPTS 665
IK P++VMREEWEKYL SK EL QTR K K K+PKGFGILNG V + S +N +PTS
Sbjct: 672 FIKSDPQKVMREEWEKYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTS 731
Query: 664 VNKLEHDALLAAASEVSGIDTKEVIVGDDPQPSAXXXXXXXXXXXXXXXXXXGPTNXXXX 485
++KLEHDAL+AAAS +S + K+ V D+ QP G
Sbjct: 732 ISKLEHDALMAAASVIS-LAKKDTAVSDNSQPHIGSGGRGKGRGKGRNIKITGKAQVSGH 790
Query: 484 XXXXXXXXXPETSKLEVSGSENKGPEIATGPVEDGFSHERLLTRPSINKGVLRKHTQEVN 305
K EV GSEN PV+ PS +
Sbjct: 791 KVNNSNSEQGRNDKSEVFGSENDSQGKEIDPVK--------TDAPSFS------------ 830
Query: 304 GTDCLNAKPLPPVHFYALENNR-DILDIVKPSVVIVYHPDMTFVREVEIYKAENPSKLLK 128
NAK LP VHFYALE+ + +ILD++KPS+VIVYHPDMTFVRE+EIYK ENPSK LK
Sbjct: 831 -----NAKQLPLVHFYALESEKSNILDVLKPSIVIVYHPDMTFVREIEIYKTENPSKKLK 885
Query: 127 VYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPTNQ 2
VYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIP +Q
Sbjct: 886 VYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPVDQ 927
Score = 123 bits (309), Expect = 1e-25
Identities = 59/64 (92%), Positives = 63/64 (98%)
Frame = -3
Query: 1494 SCLKEIRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGRKTKQLVMDLKTLRKLL 1315
+CLKE+RKTNKVDV+DLTVENGLFKSFDEIVRRQLDPIWHTLG+KTKQLV DLKTLRKLL
Sbjct: 459 ACLKEMRKTNKVDVDDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLL 518
Query: 1314 DYLV 1303
DYLV
Sbjct: 519 DYLV 522
>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
[Medicago truncatula]
Length = 984
Score = 384 bits (985), Expect = e-104
Identities = 238/520 (45%), Positives = 295/520 (56%), Gaps = 1/520 (0%)
Frame = -2
Query: 1558 KEIRKTNKVDVEDLTVENGLFKLFERN*EDE*SGC*GFDCGEWFV*VV**DCQKTVGSYL 1379
KE+RKTNKVDVEDLTVENGLFK F+ ++ +
Sbjct: 229 KEMRKTNKVDVEDLTVENGLFKSFDEI------------------------VRRQLDPIW 264
Query: 1378 AYFG*EDKTACYGFEDFEETAGLSC*LFRYDAVTYLKYLDTLRVSEGVRSVWIFADSSYK 1199
G + K D + L L RYDAVTYLKYLDTLRVSE RSVWIFA++SYK
Sbjct: 265 HTLGKKTKQLV---SDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYK 321
Query: 1198 IFELAKKRVYQLVRSDGVKVSAXXXXXXXXXXXXXXDQYNEKEVKGGSADTSXXXXXXXX 1019
IF+ AKKRVY LVRSDGVK++ D + +E +A TS
Sbjct: 322 IFDYAKKRVYHLVRSDGVKLNESSKNVKNKKKKAKGDNEDTEEADV-TASTSSNHGIVLE 380
Query: 1018 XXXXXAPKWXXXXXXXXXXXXXXXXQATIGKECVENVED-DSFIVLVACKDERSCMQMED 842
APKW Q + +E + ED D+ IVLVACKDERSC+Q+E+
Sbjct: 381 EVLEEAPKWKVLRDILEEVEEERRKQGILREEVLAEGEDTDNGIVLVACKDERSCLQLEE 440
Query: 841 CIKKGPRQVMREEWEKYLRSKAELHSFQTRSKKKKDPKGFGILNGVVHTMSRENADPTSV 662
CI P++VM++EW+KYL +K +L + KK KDPKGFGILNGV +N + +
Sbjct: 441 CITNNPKKVMQDEWKKYLLNKVQLRDVVHKKKKPKDPKGFGILNGVTPISLAQNTETGGI 500
Query: 661 NKLEHDALLAAASEVSGIDTKEVIVGDDPQPSAXXXXXXXXXXXXXXXXXXGPTNXXXXX 482
NK EHDALLAAAS++ + K +V D PQ + GP
Sbjct: 501 NKQEHDALLAAASKLRNLAEKNHVVEDTPQ--SDLGGHVRGKGKRKLGNRNGPIIIDGSG 558
Query: 481 XXXXXXXXPETSKLEVSGSENKGPEIATGPVEDGFSHERLLTRPSINKGVLRKHTQEVNG 302
+ K +S S+NK T V E S++ VLR+HT
Sbjct: 559 VQSNNKEEVTSGKTGMSDSKNKAHMGETSAVSTDRVCETKHGGISVDDAVLRRHT--FPD 616
Query: 301 TDCLNAKPLPPVHFYALENNRDILDIVKPSVVIVYHPDMTFVREVEIYKAENPSKLLKVY 122
+ KPLPPVHFYALE+++ ILDI+KPS+++VYHPDMTFVRE+E+YKAENPSK LKVY
Sbjct: 617 AMARDGKPLPPVHFYALESDQPILDILKPSIIVVYHPDMTFVREIEVYKAENPSKRLKVY 676
Query: 121 FLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPTNQ 2
F+FYEDSTEVQKFEASIRRENGAFESLIRQKS+MMIP +Q
Sbjct: 677 FIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPIDQ 716
Score = 124 bits (312), Expect = 5e-26
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 1494 SCLKEIRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGRKTKQLVMDLKTLRKLL 1315
+CLKE+RKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLG+KTKQLV DLKTLRKLL
Sbjct: 226 ACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLL 285
Query: 1314 DYLV 1303
DYLV
Sbjct: 286 DYLV 289
>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
Length = 967
Score = 374 bits (961), Expect = e-101
Identities = 234/522 (44%), Positives = 293/522 (56%), Gaps = 3/522 (0%)
Frame = -2
Query: 1558 KEIRKTNKVDVEDLTVENGLFKLFERN*EDE*SGC*GFDCGEWFV*VV**DCQKTVGSYL 1379
KE+RKTNKVDVEDLTVENGLFK F+ ++ +
Sbjct: 229 KEMRKTNKVDVEDLTVENGLFKSFDEI------------------------VRRQLDPIW 264
Query: 1378 AYFG*EDKTACYGFEDFEETAGLSC*LFRYDAVTYLKYLDTLRVSEGVRSVWIFADSSYK 1199
G + K D + L L RYDAVTYLKYLDTLRVSE RSVWIFA++SYK
Sbjct: 265 HTLGKKTKQLV---SDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYK 321
Query: 1198 IFELAKKRVYQLVRSDGVKVSAXXXXXXXXXXXXXXDQYNEKEVKGGSADTSXXXXXXXX 1019
IF+ AKKRV+ LVR+DGVK + D + +EV G S+ +S
Sbjct: 322 IFDYAKKRVFHLVRADGVKFNESSKSVKNKKRRTKGDDKDIEEVDGTSSSSSNAGLILEE 381
Query: 1018 XXXXXAPKWXXXXXXXXXXXXXXXXQATIGKECVENVED-DSFIVLVACKDERSCMQMED 842
PKW Q + +E + ED ++ IVLVACKDERSC+Q+E+
Sbjct: 382 VLEEA-PKWKVLRNVLEEVEEERQKQGMLREEVLAEGEDTNNGIVLVACKDERSCLQLEE 440
Query: 841 CIKKGPRQVMREEWEKYLRSKAELHSFQTRSKKKKDPK--GFGILNGVVHTMSRENADPT 668
CI GP++VM EEW+KYL +K +L + KK KDPK GFGIL+GV ++A+ T
Sbjct: 441 CITNGPKKVMHEEWKKYLLNKVQLRDIVNKKKKPKDPKPKGFGILDGVTPIKPVQSAETT 500
Query: 667 SVNKLEHDALLAAASEVSGIDTKEVIVGDDPQPSAXXXXXXXXXXXXXXXXXXGPTNXXX 488
S++K EHDALLAAAS++ I + + D PQP + P
Sbjct: 501 SISKQEHDALLAAASKLRNIAENDHVGEDTPQPDSGGQGRAKRKRKVGIRND--PVILDG 558
Query: 487 XXXXXXXXXXPETSKLEVSGSENKGPEIATGPVEDGFSHERLLTRPSINKGVLRKHTQEV 308
+ K+ +S S+NK E T P+ G E + R
Sbjct: 559 SGVQNNNKAQSTSDKIGMSDSKNKIDEDETNPISAGRFCETMQAR--------------- 603
Query: 307 NGTDCLNAKPLPPVHFYALENNRDILDIVKPSVVIVYHPDMTFVREVEIYKAENPSKLLK 128
N K LPPV+FYALE+++ ILDI+KPS+VIVYHPDMTFVRE+E+YKAENPSK LK
Sbjct: 604 ------NGKSLPPVYFYALESDQPILDILKPSIVIVYHPDMTFVREIEVYKAENPSKRLK 657
Query: 127 VYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSLMMIPTNQ 2
VYF+FYEDS+EVQKFEASIRRENGAFESLIRQKSLMMIP +Q
Sbjct: 658 VYFIFYEDSSEVQKFEASIRRENGAFESLIRQKSLMMIPVDQ 699
Score = 124 bits (312), Expect = 5e-26
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 1494 SCLKEIRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGRKTKQLVMDLKTLRKLL 1315
+CLKE+RKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLG+KTKQLV DLKTLRKLL
Sbjct: 226 ACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLL 285
Query: 1314 DYLV 1303
DYLV
Sbjct: 286 DYLV 289