BLASTX nr result

ID: Coptis24_contig00023600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023600
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279046.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    81   3e-13
emb|CBI22289.3| unnamed protein product [Vitis vinifera]               81   3e-13
ref|XP_002526081.1| conserved hypothetical protein [Ricinus comm...    79   8e-13
emb|CAN68961.1| hypothetical protein VITISV_019276 [Vitis vinifera]    78   2e-12
ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    72   1e-10

>ref|XP_002279046.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 827

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
 Frame = -1

Query: 478 PCVGIQFDSPIEAYNFYNYYA*TMGFSIRRNSTVKSQRTNEIIAQSFCCSLEGFRNTVRS 299
           P + ++F S  +A NFYN YA  MGFSIR NS  +S++ N II++ FCCS EGFR   R+
Sbjct: 81  PTLDMEFTSEEDARNFYNAYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRREKRA 140

Query: 298 -IPIG---RRQRNRSYTRIGCKAVMFIR 227
            + +G   RR+R R  TR GCKA+M +R
Sbjct: 141 KMELGDDTRRRRARPITREGCKALMTVR 168


>emb|CBI22289.3| unnamed protein product [Vitis vinifera]
          Length = 855

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
 Frame = -1

Query: 478 PCVGIQFDSPIEAYNFYNYYA*TMGFSIRRNSTVKSQRTNEIIAQSFCCSLEGFRNTVRS 299
           P + ++F S  +A NFYN YA  MGFSIR NS  +S++ N II++ FCCS EGFR   R+
Sbjct: 109 PTLDMEFTSEEDARNFYNAYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRREKRA 168

Query: 298 -IPIG---RRQRNRSYTRIGCKAVMFIR 227
            + +G   RR+R R  TR GCKA+M +R
Sbjct: 169 KMELGDDTRRRRARPITREGCKALMTVR 196


>ref|XP_002526081.1| conserved hypothetical protein [Ricinus communis]
           gi|223534578|gb|EEF36275.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
 Frame = -1

Query: 478 PCVGIQFDSPIEAYNFYNYYA*TMGFSIRRNSTVKSQRTNEIIAQSFCCSLEGFRNT--V 305
           P +G++F S  +A NFYN YA  MGFSIR N+  +S++ N II++ FCCS EGFR     
Sbjct: 63  PALGMEFASEDDARNFYNSYAKQMGFSIRVNTYYRSKKDNSIISREFCCSKEGFRREKHA 122

Query: 304 RSIPIG----RRQRNRSYTRIGCKAVMFIR 227
           +++  G    +R+R R  TR GCKA+M +R
Sbjct: 123 KTVESGGDETKRRRARPITREGCKALMTVR 152


>emb|CAN68961.1| hypothetical protein VITISV_019276 [Vitis vinifera]
          Length = 808

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
 Frame = -1

Query: 478 PCVGIQFDSPIEAYNFYNYYA*TMGFSIRRNSTVKSQRTNEIIAQSFCCSLEGFRNTVRS 299
           P + ++F S  +A  FYN YA  MGFSIR NS  +S++ N II++ FCCS EGFR   R+
Sbjct: 62  PTLDMEFTSEEDARXFYNAYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRREKRA 121

Query: 298 -IPIG---RRQRNRSYTRIGCKAVMFIR 227
            + +G   RR+R R  TR GCKA+M +R
Sbjct: 122 KMELGDDTRRRRARPITREGCKALMTVR 149


>ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 790

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = -1

Query: 478 PCVGIQFDSPIEAYNFYNYYA*TMGFSIRRNSTVKSQRTNEIIAQSFCCSLEGFR-NTVR 302
           PC G++F+S   A  FYN YA  +GFS R + + +S+R   II +SF C+ EGFR    +
Sbjct: 69  PCQGMEFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVEREK 128

Query: 301 SIPIGRRQRNRSYTRIGCKAVMFIRIK 221
            +  GR +R R+ TR+GCKA++ ++I+
Sbjct: 129 HLVDGRVKRPRAETRVGCKAMLVVKIQ 155


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