BLASTX nr result
ID: Coptis24_contig00023599
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023599 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24205.3| unnamed protein product [Vitis vinifera] 61 1e-07 ref|XP_002264774.1| PREDICTED: uncharacterized protein LOC100249... 61 1e-07 ref|XP_002278715.1| PREDICTED: uncharacterized protein LOC100254... 60 1e-07 emb|CAN73105.1| hypothetical protein VITISV_030980 [Vitis vinifera] 60 1e-07 ref|NP_563999.1| uncharacterized protein [Arabidopsis thaliana] ... 59 5e-07 >emb|CBI24205.3| unnamed protein product [Vitis vinifera] Length = 215 Score = 60.8 bits (146), Expect = 1e-07 Identities = 23/33 (69%), Positives = 28/33 (84%) Frame = -3 Query: 376 LMFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278 L F GCP CL+YV+I+KNNPKCPRC+S VP+P Sbjct: 169 LYFTAGCPGCLLYVLISKNNPKCPRCNSVVPTP 201 >ref|XP_002264774.1| PREDICTED: uncharacterized protein LOC100249643 [Vitis vinifera] Length = 244 Score = 60.8 bits (146), Expect = 1e-07 Identities = 23/33 (69%), Positives = 28/33 (84%) Frame = -3 Query: 376 LMFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278 L F GCP CL+YV+I+KNNPKCPRC+S VP+P Sbjct: 198 LYFTAGCPGCLLYVLISKNNPKCPRCNSVVPTP 230 >ref|XP_002278715.1| PREDICTED: uncharacterized protein LOC100254564 [Vitis vinifera] gi|296089260|emb|CBI39032.3| unnamed protein product [Vitis vinifera] Length = 220 Score = 60.5 bits (145), Expect = 1e-07 Identities = 24/32 (75%), Positives = 26/32 (81%) Frame = -3 Query: 373 MFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278 MFA GCP CL+YVM + NPKCPRCDS VPSP Sbjct: 175 MFAAGCPVCLLYVMTYRKNPKCPRCDSIVPSP 206 >emb|CAN73105.1| hypothetical protein VITISV_030980 [Vitis vinifera] Length = 220 Score = 60.5 bits (145), Expect = 1e-07 Identities = 24/32 (75%), Positives = 26/32 (81%) Frame = -3 Query: 373 MFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278 MFA GCP CL+YVM + NPKCPRCDS VPSP Sbjct: 175 MFAAGCPVCLLYVMTYRKNPKCPRCDSIVPSP 206 >ref|NP_563999.1| uncharacterized protein [Arabidopsis thaliana] gi|4966370|gb|AAD34701.1|AC006341_29 >F3O9.30 [Arabidopsis thaliana] gi|21536742|gb|AAM61074.1| unknown [Arabidopsis thaliana] gi|22655156|gb|AAM98168.1| expressed protein [Arabidopsis thaliana] gi|30023742|gb|AAP13404.1| At1g16500 [Arabidopsis thaliana] gi|332191341|gb|AEE29462.1| uncharacterized protein [Arabidopsis thaliana] Length = 259 Score = 58.5 bits (140), Expect = 5e-07 Identities = 23/30 (76%), Positives = 24/30 (80%) Frame = -3 Query: 367 AGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278 A GCP CL YV +AKNNPKCPRC SFVP P Sbjct: 217 AAGCPGCLSYVFVAKNNPKCPRCHSFVPLP 246