BLASTX nr result

ID: Coptis24_contig00023599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023599
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24205.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002264774.1| PREDICTED: uncharacterized protein LOC100249...    61   1e-07
ref|XP_002278715.1| PREDICTED: uncharacterized protein LOC100254...    60   1e-07
emb|CAN73105.1| hypothetical protein VITISV_030980 [Vitis vinifera]    60   1e-07
ref|NP_563999.1| uncharacterized protein [Arabidopsis thaliana] ...    59   5e-07

>emb|CBI24205.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -3

Query: 376 LMFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278
           L F  GCP CL+YV+I+KNNPKCPRC+S VP+P
Sbjct: 169 LYFTAGCPGCLLYVLISKNNPKCPRCNSVVPTP 201


>ref|XP_002264774.1| PREDICTED: uncharacterized protein LOC100249643 [Vitis vinifera]
          Length = 244

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -3

Query: 376 LMFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278
           L F  GCP CL+YV+I+KNNPKCPRC+S VP+P
Sbjct: 198 LYFTAGCPGCLLYVLISKNNPKCPRCNSVVPTP 230


>ref|XP_002278715.1| PREDICTED: uncharacterized protein LOC100254564 [Vitis vinifera]
           gi|296089260|emb|CBI39032.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = -3

Query: 373 MFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278
           MFA GCP CL+YVM  + NPKCPRCDS VPSP
Sbjct: 175 MFAAGCPVCLLYVMTYRKNPKCPRCDSIVPSP 206


>emb|CAN73105.1| hypothetical protein VITISV_030980 [Vitis vinifera]
          Length = 220

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = -3

Query: 373 MFAGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278
           MFA GCP CL+YVM  + NPKCPRCDS VPSP
Sbjct: 175 MFAAGCPVCLLYVMTYRKNPKCPRCDSIVPSP 206


>ref|NP_563999.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4966370|gb|AAD34701.1|AC006341_29 >F3O9.30
           [Arabidopsis thaliana] gi|21536742|gb|AAM61074.1|
           unknown [Arabidopsis thaliana]
           gi|22655156|gb|AAM98168.1| expressed protein
           [Arabidopsis thaliana] gi|30023742|gb|AAP13404.1|
           At1g16500 [Arabidopsis thaliana]
           gi|332191341|gb|AEE29462.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 259

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 23/30 (76%), Positives = 24/30 (80%)
 Frame = -3

Query: 367 AGGCPSCLMYVMIAKNNPKCPRCDSFVPSP 278
           A GCP CL YV +AKNNPKCPRC SFVP P
Sbjct: 217 AAGCPGCLSYVFVAKNNPKCPRCHSFVPLP 246


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