BLASTX nr result
ID: Coptis24_contig00023587
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023587 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONA... 105 4e-21 emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera] 105 4e-21 ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONA... 103 1e-20 ref|XP_002518587.1| DNA binding protein, putative [Ricinus commu... 95 7e-18 ref|XP_003547117.1| PREDICTED: transcription factor DYSFUNCTIONA... 94 1e-17 >ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis vinifera] Length = 204 Score = 105 bits (262), Expect = 4e-21 Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 3/108 (2%) Frame = +1 Query: 1 AITYITGLQNHVKGLSERLIEMETVEGE--KQGSEE-DTTEEIEKFQIEDEVKVTCIDEH 171 AITYI LQ +VK LS++L+EME E KQ SE D EE+ K IE++VKVT ID + Sbjct: 74 AITYIKELQKNVKDLSDQLLEMEASSEEEAKQRSETIDAAEEMNKCGIEEDVKVTNIDGN 133 Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315 + WLK++ + KR FTKL+E +N LGF TD +VTTSKG LI CVE Sbjct: 134 KFWLKIVIQKKRSSFTKLVEAMNFLGFEFTDTSVTTSKGAILITACVE 181 >emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera] Length = 204 Score = 105 bits (262), Expect = 4e-21 Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 3/108 (2%) Frame = +1 Query: 1 AITYITGLQNHVKGLSERLIEMETVEGE--KQGSEE-DTTEEIEKFQIEDEVKVTCIDEH 171 AITYI LQ +VK LS++L+EME E KQ SE D EE+ K IE++VKVT ID + Sbjct: 74 AITYIKELQKNVKDLSDQLLEMEASSEEEAKQRSETIDAAEEMNKCGIEEDVKVTNIDGN 133 Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315 + WLK++ + KR FTKL+E +N LGF TD +VTTSKG LI CVE Sbjct: 134 KFWLKIVIQKKRSSFTKLVEAMNFLGFEFTDTSVTTSKGAILITACVE 181 >ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis vinifera] Length = 204 Score = 103 bits (258), Expect = 1e-20 Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 3/108 (2%) Frame = +1 Query: 1 AITYITGLQNHVKGLSERLIEMETVEGE--KQGSEE-DTTEEIEKFQIEDEVKVTCIDEH 171 AITYI LQ +VK LS++L+EME E KQ SE D EE+ K IE++V+VT ID + Sbjct: 74 AITYIKELQKNVKDLSDQLLEMEASSEEEAKQRSETIDAAEEMNKCGIEEDVEVTNIDGN 133 Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315 + WLK++ + KR FTKL+E +N LGF TD +VTTSKG LI CVE Sbjct: 134 KFWLKIVIQKKRSSFTKLVEAMNFLGFEFTDTSVTTSKGAILITACVE 181 >ref|XP_002518587.1| DNA binding protein, putative [Ricinus communis] gi|223542432|gb|EEF43974.1| DNA binding protein, putative [Ricinus communis] Length = 207 Score = 94.7 bits (234), Expect = 7e-18 Identities = 49/108 (45%), Positives = 73/108 (67%), Gaps = 3/108 (2%) Frame = +1 Query: 1 AITYITGLQNHVKGLSERLIEMETVEGEK---QGSEEDTTEEIEKFQIEDEVKVTCIDEH 171 AITYI LQ HVK LS++L+EM+ + E + E D EE+++ I ++V+VT +DE Sbjct: 77 AITYIQELQKHVKHLSDQLLEMDELSEEAVKTRSDEFDPAEEMKQCGIMEDVQVTYVDET 136 Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315 +LW+K+I E KRGRFT+L+E ++ LG +T+ VTT +G L+ VE Sbjct: 137 KLWIKIILEKKRGRFTRLIEALSYLGLELTETTVTTYRGAMLVSSFVE 184 >ref|XP_003547117.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Glycine max] Length = 218 Score = 94.0 bits (232), Expect = 1e-17 Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 3/108 (2%) Frame = +1 Query: 1 AITYITGLQNHVKGLSERLIEMETVE---GEKQGSEEDTTEEIEKFQIEDEVKVTCIDEH 171 AITYI LQ+ V+ LS+ L ++E E + E D E+++ + I+ EV+V IDE+ Sbjct: 83 AITYIEKLQHEVQRLSQELHQLEATSEKTAEAKVDEIDAVEDMKHWGIQAEVRVAQIDEN 142 Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315 +LW+K+I E KRGRF+KLME +N G + D N TT+KG LI C++ Sbjct: 143 KLWVKIIIEKKRGRFSKLMEALNNFGIELIDTNFTTTKGAFLITSCIQ 190