BLASTX nr result

ID: Coptis24_contig00023587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023587
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONA...   105   4e-21
emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera]   105   4e-21
ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONA...   103   1e-20
ref|XP_002518587.1| DNA binding protein, putative [Ricinus commu...    95   7e-18
ref|XP_003547117.1| PREDICTED: transcription factor DYSFUNCTIONA...    94   1e-17

>ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis
           vinifera]
          Length = 204

 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   AITYITGLQNHVKGLSERLIEMETVEGE--KQGSEE-DTTEEIEKFQIEDEVKVTCIDEH 171
           AITYI  LQ +VK LS++L+EME    E  KQ SE  D  EE+ K  IE++VKVT ID +
Sbjct: 74  AITYIKELQKNVKDLSDQLLEMEASSEEEAKQRSETIDAAEEMNKCGIEEDVKVTNIDGN 133

Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315
           + WLK++ + KR  FTKL+E +N LGF  TD +VTTSKG  LI  CVE
Sbjct: 134 KFWLKIVIQKKRSSFTKLVEAMNFLGFEFTDTSVTTSKGAILITACVE 181


>emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera]
          Length = 204

 Score =  105 bits (262), Expect = 4e-21
 Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   AITYITGLQNHVKGLSERLIEMETVEGE--KQGSEE-DTTEEIEKFQIEDEVKVTCIDEH 171
           AITYI  LQ +VK LS++L+EME    E  KQ SE  D  EE+ K  IE++VKVT ID +
Sbjct: 74  AITYIKELQKNVKDLSDQLLEMEASSEEEAKQRSETIDAAEEMNKCGIEEDVKVTNIDGN 133

Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315
           + WLK++ + KR  FTKL+E +N LGF  TD +VTTSKG  LI  CVE
Sbjct: 134 KFWLKIVIQKKRSSFTKLVEAMNFLGFEFTDTSVTTSKGAILITACVE 181


>ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis
           vinifera]
          Length = 204

 Score =  103 bits (258), Expect = 1e-20
 Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   AITYITGLQNHVKGLSERLIEMETVEGE--KQGSEE-DTTEEIEKFQIEDEVKVTCIDEH 171
           AITYI  LQ +VK LS++L+EME    E  KQ SE  D  EE+ K  IE++V+VT ID +
Sbjct: 74  AITYIKELQKNVKDLSDQLLEMEASSEEEAKQRSETIDAAEEMNKCGIEEDVEVTNIDGN 133

Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315
           + WLK++ + KR  FTKL+E +N LGF  TD +VTTSKG  LI  CVE
Sbjct: 134 KFWLKIVIQKKRSSFTKLVEAMNFLGFEFTDTSVTTSKGAILITACVE 181


>ref|XP_002518587.1| DNA binding protein, putative [Ricinus communis]
           gi|223542432|gb|EEF43974.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 207

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/108 (45%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   AITYITGLQNHVKGLSERLIEMETVEGEK---QGSEEDTTEEIEKFQIEDEVKVTCIDEH 171
           AITYI  LQ HVK LS++L+EM+ +  E    +  E D  EE+++  I ++V+VT +DE 
Sbjct: 77  AITYIQELQKHVKHLSDQLLEMDELSEEAVKTRSDEFDPAEEMKQCGIMEDVQVTYVDET 136

Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315
           +LW+K+I E KRGRFT+L+E ++ LG  +T+  VTT +G  L+   VE
Sbjct: 137 KLWIKIILEKKRGRFTRLIEALSYLGLELTETTVTTYRGAMLVSSFVE 184


>ref|XP_003547117.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like
           [Glycine max]
          Length = 218

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/108 (44%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   AITYITGLQNHVKGLSERLIEMETVE---GEKQGSEEDTTEEIEKFQIEDEVKVTCIDEH 171
           AITYI  LQ+ V+ LS+ L ++E       E +  E D  E+++ + I+ EV+V  IDE+
Sbjct: 83  AITYIEKLQHEVQRLSQELHQLEATSEKTAEAKVDEIDAVEDMKHWGIQAEVRVAQIDEN 142

Query: 172 RLWLKVICESKRGRFTKLMETINGLGFGITDINVTTSKGVTLIMFCVE 315
           +LW+K+I E KRGRF+KLME +N  G  + D N TT+KG  LI  C++
Sbjct: 143 KLWVKIIIEKKRGRFSKLMEALNNFGIELIDTNFTTTKGAFLITSCIQ 190


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