BLASTX nr result

ID: Coptis24_contig00023584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023584
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267316.1| PREDICTED: G-type lectin S-receptor-like ser...   158   4e-37
emb|CAN67775.1| hypothetical protein VITISV_009161 [Vitis vinifera]   152   2e-35
emb|CBI38124.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002267635.1| PREDICTED: G-type lectin S-receptor-like ser...   152   3e-35
ref|XP_002533310.1| ATP binding protein, putative [Ricinus commu...   149   2e-34

>ref|XP_002267316.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At1g34300 [Vitis vinifera]
          Length = 838

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/135 (56%), Positives = 98/135 (72%)
 Frame = -3

Query: 405 SGNLRLTNGSGSLVWESRTSNKGISNGTLDGSGNLSLRNESVTIWSSFDNPTDTILPGQN 226
           SGNLRL NGSG+++WES T+  G+S+  LD SGNL LRN ++++WS+F+NPTDTI+P Q 
Sbjct: 90  SGNLRLVNGSGTILWESGTAGHGVSHAVLDDSGNLVLRNGTISVWSTFENPTDTIVPSQI 149

Query: 225 FTTSKSLRSGLYSFLLLDSGNLSLRWNSDVIYWNQALNSSFRGNLSSPXXXXXXXXXXXL 46
           FT+S +LR+G +SF L  SGNL+LRWN+ ++YWNQ LNSS   NL+SP           L
Sbjct: 150 FTSSNTLRAGSFSFSLTKSGNLTLRWNNSIVYWNQGLNSSVSSNLTSPSFGIQSLGILTL 209

Query: 45  FDSTLSVPVNMAYSS 1
            D TLS  V MAYSS
Sbjct: 210 SDPTLSASVVMAYSS 224


>emb|CAN67775.1| hypothetical protein VITISV_009161 [Vitis vinifera]
          Length = 846

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/140 (53%), Positives = 98/140 (70%)
 Frame = -3

Query: 420 FELQLSGNLRLTNGSGSLVWESRTSNKGISNGTLDGSGNLSLRNESVTIWSSFDNPTDTI 241
           F    SGNL L + +G+++WES T+ +G+S+ TL  SGNL L N +V++WS+F+NPTDTI
Sbjct: 84  FRFLTSGNLHLVSSNGTVLWESGTAGRGVSSATLSDSGNLXLXNGTVSVWSTFENPTDTI 143

Query: 240 LPGQNFTTSKSLRSGLYSFLLLDSGNLSLRWNSDVIYWNQALNSSFRGNLSSPXXXXXXX 61
           +P QNFTTS SLRSGLYSF L  SGNL+L WNS ++YW++ LNS+   NL+SP       
Sbjct: 144 VPTQNFTTSNSLRSGLYSFSLTKSGNLTLTWNSSILYWSKGLNSTVDKNLTSPSLGLQSI 203

Query: 60  XXXXLFDSTLSVPVNMAYSS 1
               L D TLS  V +AYSS
Sbjct: 204 GILSLSDLTLSTSVVLAYSS 223


>emb|CBI38124.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/140 (53%), Positives = 98/140 (70%)
 Frame = -3

Query: 420 FELQLSGNLRLTNGSGSLVWESRTSNKGISNGTLDGSGNLSLRNESVTIWSSFDNPTDTI 241
           F    SGNL L + +G+++WES T+ +G+S+ TL  SGNL L N +V++WS+F+NPTDTI
Sbjct: 87  FRFLTSGNLHLVSSNGTVLWESGTAGRGVSSATLSDSGNLVLTNGTVSVWSTFENPTDTI 146

Query: 240 LPGQNFTTSKSLRSGLYSFLLLDSGNLSLRWNSDVIYWNQALNSSFRGNLSSPXXXXXXX 61
           +P QNFTTS SLRSGLYSF L  SGNL+L WNS ++YW++ LNS+   NL+SP       
Sbjct: 147 VPTQNFTTSNSLRSGLYSFSLTKSGNLTLTWNSSILYWSKGLNSTVDKNLTSPSLGLQSI 206

Query: 60  XXXXLFDSTLSVPVNMAYSS 1
               L D TLS  V +AYSS
Sbjct: 207 GILSLSDLTLSTSVVLAYSS 226


>ref|XP_002267635.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At1g34300 [Vitis vinifera]
          Length = 849

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/140 (53%), Positives = 98/140 (70%)
 Frame = -3

Query: 420 FELQLSGNLRLTNGSGSLVWESRTSNKGISNGTLDGSGNLSLRNESVTIWSSFDNPTDTI 241
           F    SGNL L + +G+++WES T+ +G+S+ TL  SGNL L N +V++WS+F+NPTDTI
Sbjct: 87  FRFLTSGNLHLVSSNGTVLWESGTAGRGVSSATLSDSGNLVLTNGTVSVWSTFENPTDTI 146

Query: 240 LPGQNFTTSKSLRSGLYSFLLLDSGNLSLRWNSDVIYWNQALNSSFRGNLSSPXXXXXXX 61
           +P QNFTTS SLRSGLYSF L  SGNL+L WNS ++YW++ LNS+   NL+SP       
Sbjct: 147 VPTQNFTTSNSLRSGLYSFSLTKSGNLTLTWNSSILYWSKGLNSTVDKNLTSPSLGLQSI 206

Query: 60  XXXXLFDSTLSVPVNMAYSS 1
               L D TLS  V +AYSS
Sbjct: 207 GILSLSDLTLSTSVVLAYSS 226


>ref|XP_002533310.1| ATP binding protein, putative [Ricinus communis]
           gi|223526854|gb|EEF29067.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 759

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/141 (50%), Positives = 101/141 (71%), Gaps = 1/141 (0%)
 Frame = -3

Query: 420 FELQLSGNLRLTNGSGSLVWESRTSNKGISNGTLDGSGNLSLRNES-VTIWSSFDNPTDT 244
           F  +L+G L+L NGSGS++W+S T + G+++ +LD SGNL+L+N S  ++WSSF+NPTDT
Sbjct: 85  FHFRLNGTLQLVNGSGSVIWDSNTGHLGVNSASLDDSGNLALKNGSGASVWSSFENPTDT 144

Query: 243 ILPGQNFTTSKSLRSGLYSFLLLDSGNLSLRWNSDVIYWNQALNSSFRGNLSSPXXXXXX 64
           I+P QN T +++L+SG YSF +LDSGNL+L WN+ VIYWN+ LNSS   NLSSP      
Sbjct: 145 IVPNQNLTENQTLKSGFYSFKVLDSGNLTLTWNNSVIYWNEGLNSSIDSNLSSPVLGLQP 204

Query: 63  XXXXXLFDSTLSVPVNMAYSS 1
                + D +L+    +AYS+
Sbjct: 205 IGILSISDVSLTSDYIVAYSN 225


Top