BLASTX nr result

ID: Coptis24_contig00023566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023566
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17121.3| unnamed protein product [Vitis vinifera]              176   4e-42
ref|XP_002273852.1| PREDICTED: protein NDR1-like [Vitis vinifera]     176   4e-42
emb|CAN64947.1| hypothetical protein VITISV_001444 [Vitis vinifera]   174   2e-41
ref|XP_002313548.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_002523739.1| conserved hypothetical protein [Ricinus comm...   164   2e-38

>emb|CBI17121.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  176 bits (445), Expect = 4e-42
 Identities = 85/154 (55%), Positives = 114/154 (74%)
 Frame = +2

Query: 125 RPKKLVYTLESGRVSGFGLHRDQLNGTFDFTLKAYNPNRRVGLYYDSIQVTVSYDYETIA 304
           +PK L Y +E G + GFGL  + LN TF F L+AYNPNR+V +YYDS++V+VSYD +T+A
Sbjct: 112 KPKGLAYDIEDGSIHGFGLSNNHLNATFHFVLRAYNPNRKVSIYYDSMEVSVSYDDQTMA 171

Query: 305 FQTLKPFFQPRHNVTHFEVKTVAQSVALLPSVAKDLRLEKSSGEIELKIRLKARIRFKVG 484
              ++PFFQ   NVT  EV+ VAQS+ L   V+KDL L++SSG++EL++R+KARIRFKVG
Sbjct: 172 SNGVQPFFQRHRNVTRLEVQLVAQSLLLSGPVSKDLHLDRSSGKVELEVRVKARIRFKVG 231

Query: 485 IWKSSHYNLKVVCSQVEVHPNSTKAFKGKKCDVD 586
           IWKS H  L+V C   EVH +S K F+  KC++D
Sbjct: 232 IWKSKHRTLRVFCLP-EVHFSSHKDFERTKCEID 264


>ref|XP_002273852.1| PREDICTED: protein NDR1-like [Vitis vinifera]
          Length = 199

 Score =  176 bits (445), Expect = 4e-42
 Identities = 85/154 (55%), Positives = 114/154 (74%)
 Frame = +2

Query: 125 RPKKLVYTLESGRVSGFGLHRDQLNGTFDFTLKAYNPNRRVGLYYDSIQVTVSYDYETIA 304
           +PK L Y +E G + GFGL  + LN TF F L+AYNPNR+V +YYDS++V+VSYD +T+A
Sbjct: 46  KPKGLAYDIEDGSIHGFGLSNNHLNATFHFVLRAYNPNRKVSIYYDSMEVSVSYDDQTMA 105

Query: 305 FQTLKPFFQPRHNVTHFEVKTVAQSVALLPSVAKDLRLEKSSGEIELKIRLKARIRFKVG 484
              ++PFFQ   NVT  EV+ VAQS+ L   V+KDL L++SSG++EL++R+KARIRFKVG
Sbjct: 106 SNGVQPFFQRHRNVTRLEVQLVAQSLLLSGPVSKDLHLDRSSGKVELEVRVKARIRFKVG 165

Query: 485 IWKSSHYNLKVVCSQVEVHPNSTKAFKGKKCDVD 586
           IWKS H  L+V C   EVH +S K F+  KC++D
Sbjct: 166 IWKSKHRTLRVFCLP-EVHFSSHKDFERTKCEID 198


>emb|CAN64947.1| hypothetical protein VITISV_001444 [Vitis vinifera]
          Length = 199

 Score =  174 bits (440), Expect = 2e-41
 Identities = 84/154 (54%), Positives = 113/154 (73%)
 Frame = +2

Query: 125 RPKKLVYTLESGRVSGFGLHRDQLNGTFDFTLKAYNPNRRVGLYYDSIQVTVSYDYETIA 304
           +PK L Y +E G + GFGL  + LN TF F L+AYNPNR+V +YYDS++V+V YD +T+A
Sbjct: 46  KPKGLAYDIEDGSIHGFGLSNNHLNATFHFVLRAYNPNRKVSIYYDSMEVSVXYDDQTMA 105

Query: 305 FQTLKPFFQPRHNVTHFEVKTVAQSVALLPSVAKDLRLEKSSGEIELKIRLKARIRFKVG 484
              ++PFFQ   NVT  EV+ VAQS+ L   V+KDL L++SSG++EL++R+KARIRFKVG
Sbjct: 106 SNGVQPFFQRHRNVTRLEVQLVAQSLLLSGPVSKDLHLDRSSGKVELEVRVKARIRFKVG 165

Query: 485 IWKSSHYNLKVVCSQVEVHPNSTKAFKGKKCDVD 586
           IWKS H  L+V C   EVH +S K F+  KC++D
Sbjct: 166 IWKSKHRTLRVFCLP-EVHFSSHKDFERTKCEID 198


>ref|XP_002313548.1| predicted protein [Populus trichocarpa] gi|222849956|gb|EEE87503.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  167 bits (422), Expect = 2e-39
 Identities = 78/155 (50%), Positives = 111/155 (71%)
 Frame = +2

Query: 125 RPKKLVYTLESGRVSGFGLHRDQLNGTFDFTLKAYNPNRRVGLYYDSIQVTVSYDYETIA 304
           +PK+LVY ++S  V  F L  + LN TFD  +KA+NPN R+ +YYD I+V+V+YD +TIA
Sbjct: 45  KPKQLVYRIDSASVHNFNLKNNHLNATFDLLIKAHNPNSRISVYYDPIEVSVAYDGQTIA 104

Query: 305 FQTLKPFFQPRHNVTHFEVKTVAQSVALLPSVAKDLRLEKSSGEIELKIRLKARIRFKVG 484
           F TL+PF QPR NVT  +   VA+  AL  ++++DLR++K SG I L +R+KARIRFKVG
Sbjct: 105 FNTLEPFHQPRRNVTRLDATLVARDAALSGALSRDLRVQKRSGNIGLDVRIKARIRFKVG 164

Query: 485 IWKSSHYNLKVVCSQVEVHPNSTKAFKGKKCDVDF 589
           I+K  H+ L++ CS V+V  +S K F+   CD+D+
Sbjct: 165 IFKLKHHTLRISCSPVKVQMSSLKNFETASCDLDW 199


>ref|XP_002523739.1| conserved hypothetical protein [Ricinus communis]
           gi|223537043|gb|EEF38679.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  164 bits (414), Expect = 2e-38
 Identities = 76/157 (48%), Positives = 112/157 (71%), Gaps = 2/157 (1%)
 Frame = +2

Query: 125 RPKKLVYTLESGRVSGFGLH--RDQLNGTFDFTLKAYNPNRRVGLYYDSIQVTVSYDYET 298
           RPK + Y++E+G V    L+   + LN +FDF ++AYNPN R+ +YYD I V++SYD +T
Sbjct: 47  RPKSMEYSIENGSVHNLNLNSNNNHLNASFDFVIRAYNPNTRISIYYDYIDVSLSYDDQT 106

Query: 299 IAFQTLKPFFQPRHNVTHFEVKTVAQSVALLPSVAKDLRLEKSSGEIELKIRLKARIRFK 478
           +AF TL+PF QPR NVT  E K  A+  AL  +++KD+R+EK+SG+++L +RLKARIRFK
Sbjct: 107 LAFNTLEPFHQPRRNVTRLEAKIEARDAALSQALSKDMRIEKASGQLQLDLRLKARIRFK 166

Query: 479 VGIWKSSHYNLKVVCSQVEVHPNSTKAFKGKKCDVDF 589
           VG+ K  H +L V+C  V VH +S+K  +   CD+++
Sbjct: 167 VGVMKFKHRHLSVICPAVMVHFSSSKIAQRSYCDIEY 203


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