BLASTX nr result

ID: Coptis24_contig00023555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023555
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]          215   3e-54
ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis ...   215   3e-54
ref|XP_002519460.1| Pectate lyase precursor, putative [Ricinus c...   212   2e-53
ref|XP_004173744.1| PREDICTED: probable pectate lyase 12-like, p...   209   2e-52
ref|XP_004143279.1| PREDICTED: probable pectate lyase 12-like [C...   209   2e-52

>gb|ADU02588.1| pectate lyase-like protein 3 [Vitis vinifera]
          Length = 489

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/145 (71%), Positives = 113/145 (77%)
 Frame = -3

Query: 436 YKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSPVANVRSSTTHYGRRTXXXX 257
           YKT+DGRGANVHIVGGGCIT+QY+S          HCV S  ANVRSS THYG RT    
Sbjct: 179 YKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSGEANVRSSPTHYGWRTLSDG 238

Query: 256 XXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSDDYIPD 77
                     IWIDHCSLS+C DGLIDA+MGS+GITISNN+FSHHDEVMLLGHSD Y+PD
Sbjct: 239 DGISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITISNNFFSHHDEVMLLGHSDSYVPD 298

Query: 76  SGMQVTIAFNHFGEALIQRMPRCRR 2
           SGMQVTIAFNHFGE L+QRMPRCRR
Sbjct: 299 SGMQVTIAFNHFGEQLVQRMPRCRR 323


>ref|XP_002265853.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
          Length = 583

 Score =  215 bits (548), Expect = 3e-54
 Identities = 104/145 (71%), Positives = 113/145 (77%)
 Frame = -3

Query: 436 YKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSPVANVRSSTTHYGRRTXXXX 257
           YKT+DGRGANVHIVGGGCIT+QY+S          HCV S  ANVRSS THYG RT    
Sbjct: 273 YKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSGEANVRSSPTHYGWRTLSDG 332

Query: 256 XXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSDDYIPD 77
                     IWIDHCSLS+C DGLIDA+MGS+GITISNN+FSHHDEVMLLGHSD Y+PD
Sbjct: 333 DGISIFGSRDIWIDHCSLSHCKDGLIDAVMGSTGITISNNFFSHHDEVMLLGHSDSYVPD 392

Query: 76  SGMQVTIAFNHFGEALIQRMPRCRR 2
           SGMQVTIAFNHFGE L+QRMPRCRR
Sbjct: 393 SGMQVTIAFNHFGEQLVQRMPRCRR 417


>ref|XP_002519460.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223541323|gb|EEF42874.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 483

 Score =  212 bits (540), Expect = 2e-53
 Identities = 102/145 (70%), Positives = 113/145 (77%)
 Frame = -3

Query: 436 YKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSPVANVRSSTTHYGRRTXXXX 257
           YKT+DGRGANVHIVGGGCIT+QY+S          HCV S   NVRSS THYG RT    
Sbjct: 158 YKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCVQSGDTNVRSSPTHYGYRTKSDG 217

Query: 256 XXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSDDYIPD 77
                     IWIDHCSLS+C DGLIDA+MGS+GITISNN+FSHH+EVMLLGHSD+Y+PD
Sbjct: 218 DGISIFGSKDIWIDHCSLSHCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDEYLPD 277

Query: 76  SGMQVTIAFNHFGEALIQRMPRCRR 2
           SGMQVTIAFNHFGE L+QRMPRCRR
Sbjct: 278 SGMQVTIAFNHFGEKLVQRMPRCRR 302


>ref|XP_004173744.1| PREDICTED: probable pectate lyase 12-like, partial [Cucumis
           sativus]
          Length = 430

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/144 (70%), Positives = 110/144 (76%)
 Frame = -3

Query: 436 YKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSPVANVRSSTTHYGRRTXXXX 257
           YKT+DGRGANVHIVGGGCIT+QY+S          HC PS    VRSS THYG RT    
Sbjct: 115 YKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCHPSGNTMVRSSPTHYGYRTKSDG 174

Query: 256 XXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSDDYIPD 77
                     IWIDHCSLS+C DGLIDA+MGS+GITISNNYFSHHDEVMLLGHSD+Y PD
Sbjct: 175 DGISIFGSKDIWIDHCSLSHCKDGLIDAVMGSTGITISNNYFSHHDEVMLLGHSDNYWPD 234

Query: 76  SGMQVTIAFNHFGEALIQRMPRCR 5
           SGMQVTIAFNHFGE L+QRMPRCR
Sbjct: 235 SGMQVTIAFNHFGEKLVQRMPRCR 258


>ref|XP_004143279.1| PREDICTED: probable pectate lyase 12-like [Cucumis sativus]
          Length = 480

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/144 (70%), Positives = 110/144 (76%)
 Frame = -3

Query: 436 YKTIDGRGANVHIVGGGCITIQYVSXXXXXXXXXXHCVPSPVANVRSSTTHYGRRTXXXX 257
           YKT+DGRGANVHIVGGGCIT+QY+S          HC PS    VRSS THYG RT    
Sbjct: 165 YKTLDGRGANVHIVGGGCITLQYISNVIIHNIHIHHCHPSGNTMVRSSPTHYGYRTKSDG 224

Query: 256 XXXXXXXXXXIWIDHCSLSYCTDGLIDAIMGSSGITISNNYFSHHDEVMLLGHSDDYIPD 77
                     IWIDHCSLS+C DGLIDA+MGS+GITISNNYFSHHDEVMLLGHSD+Y PD
Sbjct: 225 DGISIFGSKDIWIDHCSLSHCKDGLIDAVMGSTGITISNNYFSHHDEVMLLGHSDNYWPD 284

Query: 76  SGMQVTIAFNHFGEALIQRMPRCR 5
           SGMQVTIAFNHFGE L+QRMPRCR
Sbjct: 285 SGMQVTIAFNHFGEKLVQRMPRCR 308


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