BLASTX nr result

ID: Coptis24_contig00023548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023548
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517155.1| conserved hypothetical protein [Ricinus comm...   135   3e-30
ref|XP_002277630.1| PREDICTED: uncharacterized protein LOC100266...   132   3e-29
ref|NP_001238657.1| uncharacterized protein LOC100527609 [Glycin...   127   9e-28
ref|XP_003542888.1| PREDICTED: uncharacterized protein LOC100809...   126   2e-27
gb|ACU24237.1| unknown [Glycine max]                                  125   3e-27

>ref|XP_002517155.1| conserved hypothetical protein [Ricinus communis]
           gi|223543790|gb|EEF45318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 150

 Score =  135 bits (340), Expect = 3e-30
 Identities = 62/87 (71%), Positives = 73/87 (83%), Gaps = 4/87 (4%)
 Frame = -3

Query: 430 KNIYKAYMPN----SGGGGGTKSLLYYYDETCHPYIWIHETMGEFSRMVKQQYISLEDLR 263
           K+IYKAYMP     SG  GG KS+LYYYDETCHPYIW+H+T G+FSRMVKQQYISLEDLR
Sbjct: 64  KSIYKAYMPGGRSGSGSHGGMKSILYYYDETCHPYIWVHDTGGDFSRMVKQQYISLEDLR 123

Query: 262 DCSEIKIFRDNKKGCVIVKKKQRLDFC 182
           D SEI+IFRD+++GC+ V+KK R D C
Sbjct: 124 DYSEIRIFRDHQRGCISVRKKPRPDLC 150


>ref|XP_002277630.1| PREDICTED: uncharacterized protein LOC100266660 [Vitis vinifera]
          Length = 563

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/83 (69%), Positives = 72/83 (86%), Gaps = 1/83 (1%)
 Frame = -3

Query: 430 KNIYKAYMPNSGGG-GGTKSLLYYYDETCHPYIWIHETMGEFSRMVKQQYISLEDLRDCS 254
           K+IYKA+MP  GG  GG  SLLYYYDETCHPY+WIH+++G+F+RMVKQQYISLEDLRDCS
Sbjct: 65  KSIYKAHMPGRGGSNGGMNSLLYYYDETCHPYVWIHDSVGDFTRMVKQQYISLEDLRDCS 124

Query: 253 EIKIFRDNKKGCVIVKKKQRLDF 185
           EI+IFRD+++GC+ V+KK    F
Sbjct: 125 EIRIFRDHQRGCISVRKKPSCTF 147


>ref|NP_001238657.1| uncharacterized protein LOC100527609 [Glycine max]
           gi|255632749|gb|ACU16726.1| unknown [Glycine max]
          Length = 160

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
 Frame = -3

Query: 433 SKNIYKAYMPNSGG--GGGTKSLLYYYDETCHPYIWIHETMGEFSRMVKQQYISLEDLRD 260
           SK IYKAYMP   G  G G K LLYYYDETCHPY+WIH+  G+  RMVKQQYISLEDLRD
Sbjct: 75  SKRIYKAYMPGKNGNDGVGLKGLLYYYDETCHPYVWIHDIGGDSMRMVKQQYISLEDLRD 134

Query: 259 CSEIKIFRDNKKGCVIVKKKQRLDFC 182
            SEI+IFRD ++GC+ V K+ RLD C
Sbjct: 135 SSEIRIFRDQQRGCISVLKRTRLDLC 160


>ref|XP_003542888.1| PREDICTED: uncharacterized protein LOC100809890 isoform 1 [Glycine
           max] gi|356549005|ref|XP_003542889.1| PREDICTED:
           uncharacterized protein LOC100809890 isoform 2 [Glycine
           max]
          Length = 159

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
 Frame = -3

Query: 433 SKNIYKAYMPNSGG--GGGTKSLLYYYDETCHPYIWIHETMGEFSRMVKQQYISLEDLRD 260
           SK IYKAYMP   G  GGG KSLLYYYDETCHPY+WIH+  G   RMVKQQYISLE+LRD
Sbjct: 74  SKRIYKAYMPGKSGNDGGGLKSLLYYYDETCHPYVWIHDIGGGSMRMVKQQYISLENLRD 133

Query: 259 CSEIKIFRDNKKGCVIVKKKQRLDFC 182
            SEI+I RD ++GC+ V K+ R DFC
Sbjct: 134 SSEIRILRDQQRGCISVLKRTRPDFC 159


>gb|ACU24237.1| unknown [Glycine max]
          Length = 159

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
 Frame = -3

Query: 433 SKNIYKAYMPNSGG--GGGTKSLLYYYDETCHPYIWIHETMGEFSRMVKQQYISLEDLRD 260
           SK IYKAYMP   G  GGG KSLLYYYDETCHPY+WIH+  G   RMVKQQYISLE+LRD
Sbjct: 74  SKRIYKAYMPGKSGNDGGGLKSLLYYYDETCHPYVWIHDIGGGSMRMVKQQYISLENLRD 133

Query: 259 CSEIKIFRDNKKGCVIVKKKQRLDFC 182
            SEI+I RD ++GC+ V K+ R DFC
Sbjct: 134 FSEIRILRDQQRGCISVLKRTRPDFC 159


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