BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023542
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis...   110   9e-44
emb|CBI22472.3| unnamed protein product [Vitis vinifera]              110   9e-44
ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|1...   110   1e-43
ref|XP_002443248.1| hypothetical protein SORBIDRAFT_08g016307 [S...   100   3e-42
ref|XP_003575491.1| PREDICTED: histone deacetylase 6-like [Brach...   100   3e-42

>ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 154

 Score =  110 bits (276), Expect(2) = 9e-44
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = +2

Query: 62  LYGAGSGWVEARTXXXXXXXXXXXXXXIPTPNTPCSRCDHPAENWLCLCCKDILCSRFVN 241
           LYGA SGWVEART              IPTP TPC+RC +P+ENWLCLCCK++LCSRFVN
Sbjct: 23  LYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEVLCSRFVN 82

Query: 242 KHMLQHFQERNHSL 283
           KHML+H+Q+ NH L
Sbjct: 83  KHMLEHYQKVNHCL 96



 Score = 92.4 bits (228), Expect(2) = 9e-44
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +1

Query: 352 NHSLALSYSDLSVWCFSCDAYLDVQAIWQLRPVYEIAHLLKFGEAPPFRTIECLQVSCNQ 531
           NH LALSYSDLS+WCFSCDAYLD QAI QL PVYE A++LKFG+APPF T +      NQ
Sbjct: 93  NHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQAPPFPTTD------NQ 146

Query: 532 AES 540
           AE+
Sbjct: 147 AEA 149


>emb|CBI22472.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score =  110 bits (276), Expect(2) = 9e-44
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = +2

Query: 62  LYGAGSGWVEARTXXXXXXXXXXXXXXIPTPNTPCSRCDHPAENWLCLCCKDILCSRFVN 241
           LYGA SGWVEART              IPTP TPC+RC +P+ENWLCLCCK++LCSRFVN
Sbjct: 22  LYGAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEVLCSRFVN 81

Query: 242 KHMLQHFQERNHSL 283
           KHML+H+Q+ NH L
Sbjct: 82  KHMLEHYQKVNHCL 95



 Score = 92.4 bits (228), Expect(2) = 9e-44
 Identities = 44/63 (69%), Positives = 50/63 (79%)
 Frame = +1

Query: 352 NHSLALSYSDLSVWCFSCDAYLDVQAIWQLRPVYEIAHLLKFGEAPPFRTIECLQVSCNQ 531
           NH LALSYSDLS+WCFSCDAYLD QAI QL PVYE A++LKFG+APPF T +      NQ
Sbjct: 92  NHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQAPPFPTTD------NQ 145

Query: 532 AES 540
           AE+
Sbjct: 146 AEA 148


>ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|118483848|gb|ABK93815.1|
           unknown [Populus trichocarpa]
           gi|222850311|gb|EEE87858.1| predicted protein [Populus
           trichocarpa]
          Length = 160

 Score =  110 bits (276), Expect(2) = 1e-43
 Identities = 47/74 (63%), Positives = 54/74 (72%)
 Frame = +2

Query: 62  LYGAGSGWVEARTXXXXXXXXXXXXXXIPTPNTPCSRCDHPAENWLCLCCKDILCSRFVN 241
           +YGA SGWVEART              IPTP+TPC+RC HP+ENWLCL CKD+LCSRFVN
Sbjct: 24  MYGAESGWVEARTSCDHLASLSSDLAHIPTPDTPCNRCQHPSENWLCLSCKDVLCSRFVN 83

Query: 242 KHMLQHFQERNHSL 283
           KHMLQHF + +H L
Sbjct: 84  KHMLQHFHQTSHCL 97



 Score = 91.7 bits (226), Expect(2) = 1e-43
 Identities = 38/55 (69%), Positives = 48/55 (87%)
 Frame = +1

Query: 346 ERNHSLALSYSDLSVWCFSCDAYLDVQAIWQLRPVYEIAHLLKFGEAPPFRTIEC 510
           + +H LALSYSDLS+WCF+CD+YLD + I QL+PV E AH+LKFGEAPPFR++EC
Sbjct: 92  QTSHCLALSYSDLSIWCFACDSYLDARVIIQLKPVSETAHILKFGEAPPFRSVEC 146


>ref|XP_002443248.1| hypothetical protein SORBIDRAFT_08g016307 [Sorghum bicolor]
           gi|241943941|gb|EES17086.1| hypothetical protein
           SORBIDRAFT_08g016307 [Sorghum bicolor]
          Length = 148

 Score =  100 bits (250), Expect(2) = 3e-42
 Identities = 45/65 (69%), Positives = 55/65 (84%)
 Frame = +1

Query: 346 ERNHSLALSYSDLSVWCFSCDAYLDVQAIWQLRPVYEIAHLLKFGEAPPFRTIECLQVSC 525
           E  H LALS+SDLSVWCFSCD+YLDVQAI +LRPVYE+AHLLKFGE PPFR++E L ++ 
Sbjct: 80  ETGHCLALSFSDLSVWCFSCDSYLDVQAILELRPVYEVAHLLKFGERPPFRSLEVLDLTT 139

Query: 526 NQAES 540
            ++ S
Sbjct: 140 GESGS 144



 Score = 97.4 bits (241), Expect(2) = 3e-42
 Identities = 44/78 (56%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
 Frame = +2

Query: 62  LYGAGSGWVEARTXXXXXXXXXXXXXX----IPTPNTPCSRCDHPAENWLCLCCKDILCS 229
           LYGA +GWV ART                  +P P++PCSRC HPAENWLCL CKD+LCS
Sbjct: 8   LYGAAAGWVAARTTCPHLGTMPPAGPDDLARVPPPDSPCSRCHHPAENWLCLICKDVLCS 67

Query: 230 RFVNKHMLQHFQERNHSL 283
           RF+NKHML H QE  H L
Sbjct: 68  RFINKHMLCHHQETGHCL 85


>ref|XP_003575491.1| PREDICTED: histone deacetylase 6-like [Brachypodium distachyon]
          Length = 188

 Score = 99.8 bits (247), Expect(2) = 3e-42
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = +1

Query: 346 ERNHSLALSYSDLSVWCFSCDAYLDVQAIWQLRPVYEIAHLLKFGEAPPFRTIECLQVSC 525
           E  H +ALS+SDLSVWCF+CD+YLD Q+I +LRPVYE+AHLLKFGE PPFRT+E L +S 
Sbjct: 119 EMGHCIALSFSDLSVWCFACDSYLDAQSILELRPVYEVAHLLKFGERPPFRTLEVLDLSS 178

Query: 526 NQAES 540
            Q  S
Sbjct: 179 GQTGS 183



 Score = 98.2 bits (243), Expect(2) = 3e-42
 Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
 Frame = +2

Query: 62  LYGAGSGWVEARTXXXXXXXXXXXXXX----IPTPNTPCSRCDHPAENWLCLCCKDILCS 229
           LYGA SGWVEART                  +P+P++ CSRC HP+ENWLCL CKD+LCS
Sbjct: 47  LYGAASGWVEARTSCPHLSAMPAAGADELARVPSPDSQCSRCHHPSENWLCLICKDVLCS 106

Query: 230 RFVNKHMLQHFQERNHSL 283
           RF+NKHML H+QE  H +
Sbjct: 107 RFINKHMLCHYQEMGHCI 124