BLASTX nr result
ID: Coptis24_contig00023516
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023516 (234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265625.2| PREDICTED: cysteine-rich receptor-like prote... 68 7e-10 emb|CBI23161.3| unnamed protein product [Vitis vinifera] 68 7e-10 ref|XP_002304951.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_002304938.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 emb|CAA74662.1| SFR3 [Brassica oleracea var. acephala] 65 6e-09 >ref|XP_002265625.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Vitis vinifera] Length = 624 Score = 68.2 bits (165), Expect = 7e-10 Identities = 36/76 (47%), Positives = 51/76 (67%) Frame = -1 Query: 228 QKDEEKNEHALLDDSVAPSILLSRRTRDDKQTPTQDYMNLMDFSIIQVATNNFSDSNKLG 49 Q DEEK++ ALL + P+ + T++ +Q+ + M+ + I+ ATN+FS+SNKLG Sbjct: 260 QNDEEKSQRALLHNLATPTA--AAITQEFNLLSSQE-LPFMELATIRAATNDFSESNKLG 316 Query: 48 QGGFGTVYKGTLPEGK 1 GGFGTVYKG LP GK Sbjct: 317 HGGFGTVYKGVLPNGK 332 >emb|CBI23161.3| unnamed protein product [Vitis vinifera] Length = 687 Score = 68.2 bits (165), Expect = 7e-10 Identities = 36/76 (47%), Positives = 51/76 (67%) Frame = -1 Query: 228 QKDEEKNEHALLDDSVAPSILLSRRTRDDKQTPTQDYMNLMDFSIIQVATNNFSDSNKLG 49 Q DEEK++ ALL + P+ + T++ +Q+ + M+ + I+ ATN+FS+SNKLG Sbjct: 323 QNDEEKSQRALLHNLATPTA--AAITQEFNLLSSQE-LPFMELATIRAATNDFSESNKLG 379 Query: 48 QGGFGTVYKGTLPEGK 1 GGFGTVYKG LP GK Sbjct: 380 HGGFGTVYKGVLPNGK 395 >ref|XP_002304951.1| predicted protein [Populus trichocarpa] gi|222847915|gb|EEE85462.1| predicted protein [Populus trichocarpa] Length = 627 Score = 66.2 bits (160), Expect = 3e-09 Identities = 35/78 (44%), Positives = 47/78 (60%) Frame = -1 Query: 234 KNQKDEEKNEHALLDDSVAPSILLSRRTRDDKQTPTQDYMNLMDFSIIQVATNNFSDSNK 55 + +D ALL + P + D+ Q + + + MD + I+ AT+NFSDSNK Sbjct: 288 RKTRDYVPENDALLQELACPRGVTMT---DEGQLVSSEDLPFMDLTTIREATDNFSDSNK 344 Query: 54 LGQGGFGTVYKGTLPEGK 1 LGQGGFGTVYKG LP+GK Sbjct: 345 LGQGGFGTVYKGVLPDGK 362 >ref|XP_002304938.1| predicted protein [Populus trichocarpa] gi|222847902|gb|EEE85449.1| predicted protein [Populus trichocarpa] Length = 312 Score = 65.9 bits (159), Expect = 3e-09 Identities = 30/49 (61%), Positives = 38/49 (77%) Frame = -1 Query: 147 DDKQTPTQDYMNLMDFSIIQVATNNFSDSNKLGQGGFGTVYKGTLPEGK 1 D+ Q + + + MD + I+ AT+NFSDSNKLGQGGFGTVYKG LP+GK Sbjct: 3 DEGQLVSSEDLPFMDLTTIREATDNFSDSNKLGQGGFGTVYKGVLPDGK 51 >emb|CAA74662.1| SFR3 [Brassica oleracea var. acephala] Length = 841 Score = 65.1 bits (157), Expect = 6e-09 Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 2/67 (2%) Frame = -1 Query: 195 LDDSVAPSILLSRRTRDDKQTPTQD--YMNLMDFSIIQVATNNFSDSNKLGQGGFGTVYK 22 ++DS+ + ++ R ++ T D ++LM+F ++ +ATNNFS +NKLG+GGFGTVYK Sbjct: 474 IEDSLMNELAITSRRYISRENKTDDDLELSLMEFEVVALATNNFSSANKLGRGGFGTVYK 533 Query: 21 GTLPEGK 1 G L +GK Sbjct: 534 GRLLDGK 540