BLASTX nr result

ID: Coptis24_contig00023516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023516
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265625.2| PREDICTED: cysteine-rich receptor-like prote...    68   7e-10
emb|CBI23161.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002304951.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002304938.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
emb|CAA74662.1| SFR3 [Brassica oleracea var. acephala]                 65   6e-09

>ref|XP_002265625.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like
           [Vitis vinifera]
          Length = 624

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = -1

Query: 228 QKDEEKNEHALLDDSVAPSILLSRRTRDDKQTPTQDYMNLMDFSIIQVATNNFSDSNKLG 49
           Q DEEK++ ALL +   P+   +  T++     +Q+ +  M+ + I+ ATN+FS+SNKLG
Sbjct: 260 QNDEEKSQRALLHNLATPTA--AAITQEFNLLSSQE-LPFMELATIRAATNDFSESNKLG 316

Query: 48  QGGFGTVYKGTLPEGK 1
            GGFGTVYKG LP GK
Sbjct: 317 HGGFGTVYKGVLPNGK 332


>emb|CBI23161.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/76 (47%), Positives = 51/76 (67%)
 Frame = -1

Query: 228 QKDEEKNEHALLDDSVAPSILLSRRTRDDKQTPTQDYMNLMDFSIIQVATNNFSDSNKLG 49
           Q DEEK++ ALL +   P+   +  T++     +Q+ +  M+ + I+ ATN+FS+SNKLG
Sbjct: 323 QNDEEKSQRALLHNLATPTA--AAITQEFNLLSSQE-LPFMELATIRAATNDFSESNKLG 379

Query: 48  QGGFGTVYKGTLPEGK 1
            GGFGTVYKG LP GK
Sbjct: 380 HGGFGTVYKGVLPNGK 395


>ref|XP_002304951.1| predicted protein [Populus trichocarpa] gi|222847915|gb|EEE85462.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/78 (44%), Positives = 47/78 (60%)
 Frame = -1

Query: 234 KNQKDEEKNEHALLDDSVAPSILLSRRTRDDKQTPTQDYMNLMDFSIIQVATNNFSDSNK 55
           +  +D      ALL +   P  +      D+ Q  + + +  MD + I+ AT+NFSDSNK
Sbjct: 288 RKTRDYVPENDALLQELACPRGVTMT---DEGQLVSSEDLPFMDLTTIREATDNFSDSNK 344

Query: 54  LGQGGFGTVYKGTLPEGK 1
           LGQGGFGTVYKG LP+GK
Sbjct: 345 LGQGGFGTVYKGVLPDGK 362


>ref|XP_002304938.1| predicted protein [Populus trichocarpa] gi|222847902|gb|EEE85449.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 38/49 (77%)
 Frame = -1

Query: 147 DDKQTPTQDYMNLMDFSIIQVATNNFSDSNKLGQGGFGTVYKGTLPEGK 1
           D+ Q  + + +  MD + I+ AT+NFSDSNKLGQGGFGTVYKG LP+GK
Sbjct: 3   DEGQLVSSEDLPFMDLTTIREATDNFSDSNKLGQGGFGTVYKGVLPDGK 51


>emb|CAA74662.1| SFR3 [Brassica oleracea var. acephala]
          Length = 841

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
 Frame = -1

Query: 195 LDDSVAPSILLSRRTRDDKQTPTQD--YMNLMDFSIIQVATNNFSDSNKLGQGGFGTVYK 22
           ++DS+   + ++ R    ++  T D   ++LM+F ++ +ATNNFS +NKLG+GGFGTVYK
Sbjct: 474 IEDSLMNELAITSRRYISRENKTDDDLELSLMEFEVVALATNNFSSANKLGRGGFGTVYK 533

Query: 21  GTLPEGK 1
           G L +GK
Sbjct: 534 GRLLDGK 540


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