BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023513
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   156   1e-36
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   152   2e-35
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          152   2e-35
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   146   2e-33
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]   145   3e-33

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  156 bits (395), Expect = 1e-36
 Identities = 68/106 (64%), Positives = 87/106 (82%)
 Frame = +1

Query: 1   LDKKIKIVRSDRGGEYSGPFNKCCENNGIVHETTAPYAPQSNGIAERKNRTLKDMINSMI 180
           L+KKIK++RSDRGGEY  PF   C  +GI+HETTAPY+PQSNG+AERKNRTLK+M+N+M+
Sbjct: 587 LNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAML 646

Query: 181 NSSGASMNLWGEALLTACYILNKIPFKDTDKTPYEMWKNRTPTYRF 318
            SS    N+WGEA+LTA Y+LNK+P K  +KTPYE+WK R P+Y +
Sbjct: 647 ISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTY 692


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  152 bits (385), Expect = 2e-35
 Identities = 66/106 (62%), Positives = 85/106 (80%)
 Frame = +1

Query: 1   LDKKIKIVRSDRGGEYSGPFNKCCENNGIVHETTAPYAPQSNGIAERKNRTLKDMINSMI 180
           L+KKIK++RSDRGGEY  PF   C  +GI+HETT PY+PQSNG+AERKNRTLK+M+N+M+
Sbjct: 587 LNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTTPYSPQSNGVAERKNRTLKEMMNAML 646

Query: 181 NSSGASMNLWGEALLTACYILNKIPFKDTDKTPYEMWKNRTPTYRF 318
            S     N+WGEA+LTA Y+LNK+P K  +KTPYE+WK R P+Y +
Sbjct: 647 ISFSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTY 692


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  152 bits (385), Expect = 2e-35
 Identities = 68/106 (64%), Positives = 88/106 (83%)
 Frame = +1

Query: 1   LDKKIKIVRSDRGGEYSGPFNKCCENNGIVHETTAPYAPQSNGIAERKNRTLKDMINSMI 180
           L++KIK +RSDRGGEY  PF   CE +GI+H+ TAPY+PQSNGIAERKNRTLK+M+N+M+
Sbjct: 576 LNRKIKELRSDRGGEYVVPFMSLCEQSGIIHQVTAPYSPQSNGIAERKNRTLKEMMNAML 635

Query: 181 NSSGASMNLWGEALLTACYILNKIPFKDTDKTPYEMWKNRTPTYRF 318
            SSG   N+WGEA+L+A Y+LNKIP K  + TPYE+WK R+P+Y+F
Sbjct: 636 ISSGLPQNMWGEAVLSANYLLNKIPRKQENTTPYELWKGRSPSYKF 681


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/107 (63%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   LDKKIKIVRSDRGGEYSGP-FNKCCENNGIVHETTAPYAPQSNGIAERKNRTLKDMINSM 177
           L K+IK +RSDRGGEYS     + CE+NGI+HE TAPY+PQ NGIAERKNRTLK+M+N+M
Sbjct: 583 LGKRIKRLRSDRGGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAM 642

Query: 178 INSSGASMNLWGEALLTACYILNKIPFKDTDKTPYEMWKNRTPTYRF 318
           + SSG S N+WGEA+L+AC+ILN+IP K  DKTPYE+WK   P   +
Sbjct: 643 LLSSGLSDNMWGEAVLSACFILNRIPHKRLDKTPYELWKGHAPNLSY 689


>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
          Length = 565

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/107 (61%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   LDKKIKIVRSDRGGEY-SGPFNKCCENNGIVHETTAPYAPQSNGIAERKNRTLKDMINSM 177
           L+KKI+ +R+DRGGEY S  FN  CE++ I+HETT PY+P+SNGIAERKNRTLK+M+N+M
Sbjct: 442 LNKKIERLRTDRGGEYESNLFNSFCEDHRIIHETTPPYSPESNGIAERKNRTLKEMMNAM 501

Query: 178 INSSGASMNLWGEALLTACYILNKIPFKDTDKTPYEMWKNRTPTYRF 318
           + SSG  +NLWGEA+L+AC+I N+IP+K T KTPYE+WK   P   +
Sbjct: 502 LVSSGTPLNLWGEAILSACHIQNRIPYKKTGKTPYELWKGYAPNIAY 548