BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023511
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...    91   1e-16
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]    90   2e-16
ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula] g...    84   9e-15
ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...    83   3e-14

>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   KRVVEQCVVPVESRVKGVEMEIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRD 181
           K++V QCVVPV++R+  +EME+++C+QQI   D  YR E RRLD AK +LV M YHPLRD
Sbjct: 158 KQMVGQCVVPVDARINALEMELKLCRQQIAGSDNAYRNEKRRLDAAKERLVVMKYHPLRD 217

Query: 182 YGS-AEAVDECKGKTKRKKSKQCSE 253
           Y S +  VDEC   ++RKK K+ S+
Sbjct: 218 YKSTSSGVDEC--NSQRKKLKRGSD 240


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   KRVVEQCVVPVESRVKGVEMEIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRD 181
           K++V QCVVPV++R+  +EME+ +C+QQI   D  YR E RRLD AK +LV M YHPLRD
Sbjct: 158 KQMVGQCVVPVDARINALEMELXLCRQQIAGXDNAYRNEKRRLDAAKERLVIMKYHPLRD 217

Query: 182 YGS-AEAVDECKGKTKRKKSKQCSE 253
           Y S +  VDEC   ++RKK K+ S+
Sbjct: 218 YKSTSSGVDEC--NSQRKKLKRGSD 240


>ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499773|gb|AES80976.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 241

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/83 (51%), Positives = 57/83 (68%)
 Frame = +2

Query: 2   KRVVEQCVVPVESRVKGVEMEIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRD 181
           K++VEQCVVP ESR++ +EME+R+CKQ I  L+K YR+E  RLD AK +L S+ YHPLR 
Sbjct: 151 KQMVEQCVVPAESRIRTLEMELRLCKQHILGLEKSYRDEKCRLDNAKEELESLKYHPLRK 210

Query: 182 YGSAEAVDECKGKTKRKKSKQCS 250
           +       E + K KRK  K C+
Sbjct: 211 HKPVGG-GENEHKVKRKMLKSCN 232


>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
           gi|223529466|gb|EEF31423.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   KRVVEQCVVPVESRVKGVEMEIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRD 181
           K++VEQCVV  ESRV  +EME+++CKQQI   +K +R+E RRL++AK +L SM YHPL+D
Sbjct: 161 KQLVEQCVVSFESRVHSLEMELKLCKQQIVGFNKAHRDEKRRLEKAKEELASMKYHPLQD 220

Query: 182 YGSAE-AVDECKGKTKRKKSKQCSEK 256
           Y S     +E   K K K+S +  EK
Sbjct: 221 YRSTSCGQNEYNKKKKFKRSVKFPEK 246


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/93 (48%), Positives = 61/93 (65%)
 Frame = +2

Query: 2   KRVVEQCVVPVESRVKGVEMEIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRD 181
           K++VEQ  VPVESRV  +EME+++C+Q+I   DK YR+E RRL+ A  +L SM YHPLRD
Sbjct: 157 KQIVEQSAVPVESRVHSLEMELKLCRQRISGFDKAYRDEKRRLELATEQLASMKYHPLRD 216

Query: 182 YGSAEAVDECKGKTKRKKSKQCSEKFCSSGDKC 280
           +    + D+ + K KRKK K  +   C S   C
Sbjct: 217 HKLINSGDK-EHKKKRKKLK--TSVICKSLKLC 246