BLASTX nr result

ID: Coptis24_contig00023510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023510
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301714.1| NBS resistance protein [Populus trichocarpa]...    93   2e-17
ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichoca...    93   2e-17
gb|EAY73380.1| hypothetical protein OsI_01261 [Oryza sativa Indi...    90   2e-16
ref|NP_001042644.1| Os01g0260500 [Oryza sativa Japonica Group] g...    90   2e-16
gb|AAR29074.1| blight resistance protein SH10, partial [Solanum ...    88   6e-16

>ref|XP_002301714.1| NBS resistance protein [Populus trichocarpa]
           gi|222843440|gb|EEE80987.1| NBS resistance protein
           [Populus trichocarpa]
          Length = 171

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/65 (61%), Positives = 55/65 (84%)
 Frame = +1

Query: 4   RNDEFWRCVRDSELWTLQERGENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEK 183
           ++++ W CV++SE+W L++ G +TILPALRLSY +LPP L+QCFAYCSI+PKDY MEK++
Sbjct: 102 KHEDEWLCVKESEIWDLRQEG-STILPALRLSYINLPPHLKQCFAYCSIFPKDYVMEKDR 160

Query: 184 LIHQW 198
           LI  W
Sbjct: 161 LITLW 165


>ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222843439|gb|EEE80986.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1109

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 40/65 (61%), Positives = 55/65 (84%)
 Frame = +1

Query: 4   RNDEFWRCVRDSELWTLQERGENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEK 183
           ++++ W CV++SE+W L++ G +TILPALRLSY +LPP L+QCFAYCSI+PKDY MEK++
Sbjct: 386 KHEDEWLCVKESEIWDLRQEG-STILPALRLSYINLPPHLKQCFAYCSIFPKDYVMEKDR 444

Query: 184 LIHQW 198
           LI  W
Sbjct: 445 LITLW 449


>gb|EAY73380.1| hypothetical protein OsI_01261 [Oryza sativa Indica Group]
          Length = 1264

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 37/65 (56%), Positives = 53/65 (81%)
 Frame = +1

Query: 4   RNDEFWRCVRDSELWTLQERGENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEK 183
           RN+E W  VRDSE+W L +  E TILP+L+LSY+ +PP+L+QCFAYCS++P+++ ++K K
Sbjct: 354 RNEESWIAVRDSEIWQLDK--EETILPSLKLSYDQMPPVLKQCFAYCSVFPRNHEIDKGK 411

Query: 184 LIHQW 198
           LI QW
Sbjct: 412 LIQQW 416


>ref|NP_001042644.1| Os01g0260500 [Oryza sativa Japonica Group]
           gi|9558523|dbj|BAB03441.1| NBS-LRR disease resistance
           protein -like [Oryza sativa Japonica Group]
           gi|113532175|dbj|BAF04558.1| Os01g0260500 [Oryza sativa
           Japonica Group] gi|125569799|gb|EAZ11314.1| hypothetical
           protein OsJ_01178 [Oryza sativa Japonica Group]
          Length = 1292

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 37/65 (56%), Positives = 53/65 (81%)
 Frame = +1

Query: 4   RNDEFWRCVRDSELWTLQERGENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEK 183
           RN+E W  VRDSE+W L +  E TILP+L+LSY+ +PP+L+QCFAYCS++P+++ ++K K
Sbjct: 382 RNEESWIAVRDSEIWQLDK--EETILPSLKLSYDQMPPVLKQCFAYCSVFPRNHEIDKGK 439

Query: 184 LIHQW 198
           LI QW
Sbjct: 440 LIQQW 444


>gb|AAR29074.1| blight resistance protein SH10, partial [Solanum tuberosum]
          Length = 948

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/65 (63%), Positives = 49/65 (75%)
 Frame = +1

Query: 4   RNDEFWRCVRDSELWTLQERGENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEK 183
           R +  W  VRDSE+W L +  E +ILPALRLSY+HLP  LRQCFAYC+++PKD  MEKEK
Sbjct: 365 REEREWEHVRDSEIWNLPQE-ERSILPALRLSYHHLPLDLRQCFAYCAVFPKDTKMEKEK 423

Query: 184 LIHQW 198
           LI  W
Sbjct: 424 LISLW 428


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