BLASTX nr result

ID: Coptis24_contig00023506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023506
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   136   3e-30
emb|CBI22382.3| unnamed protein product [Vitis vinifera]              136   3e-30
ref|XP_003555549.1| PREDICTED: probable lysine-specific demethyl...   126   3e-27
ref|XP_003535393.1| PREDICTED: probable lysine-specific demethyl...   122   4e-26
ref|XP_002521976.1| transcription factor, putative [Ricinus comm...   114   8e-24

>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
           vinifera]
          Length = 1271

 Score =  136 bits (342), Expect = 3e-30
 Identities = 69/119 (57%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
 Frame = +2

Query: 197 MGTECIRTCVKEEIVDPSVPPGFESLTSFILKKMDDCEVKMTSIPSVGVSESQPAEMAAK 376
           MGTE IR CVKEE +D  VPPGFESLTSF LK+++D E+    + S   SESQ  +M  +
Sbjct: 1   MGTELIRACVKEENLD--VPPGFESLTSFTLKRVEDNEITTPCLASTSGSESQSIKMETE 58

Query: 377 LDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNIS-STPQLPKGVVRGCTDC 550
            DISD A ++R LRRRPWINY Q +NSS +ESDSE ++QN+    P LPKGV+RGC +C
Sbjct: 59  FDISDAANISRSLRRRPWINYGQFDNSSDDESDSEHLNQNLPFRRPCLPKGVIRGCLEC 117


>emb|CBI22382.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score =  136 bits (342), Expect = 3e-30
 Identities = 69/119 (57%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
 Frame = +2

Query: 197 MGTECIRTCVKEEIVDPSVPPGFESLTSFILKKMDDCEVKMTSIPSVGVSESQPAEMAAK 376
           MGTE IR CVKEE +D  VPPGFESLTSF LK+++D E+    + S   SESQ  +M  +
Sbjct: 1   MGTELIRACVKEENLD--VPPGFESLTSFTLKRVEDNEITTPCLASTSGSESQSIKMETE 58

Query: 377 LDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNIS-STPQLPKGVVRGCTDC 550
            DISD A ++R LRRRPWINY Q +NSS +ESDSE ++QN+    P LPKGV+RGC +C
Sbjct: 59  FDISDAANISRSLRRRPWINYGQFDNSSDDESDSEHLNQNLPFRRPCLPKGVIRGCLEC 117


>ref|XP_003555549.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
           max]
          Length = 1257

 Score =  126 bits (316), Expect = 3e-27
 Identities = 69/126 (54%), Positives = 83/126 (65%), Gaps = 6/126 (4%)
 Frame = +2

Query: 197 MGTECIRTCVKEEIVD-PSVPPGFESLTSFILKKMDDCEVK----MTSIP-SVGVSESQP 358
           MGTE +R CVKE+  D PSVPPGFES TSF LKK+++ E +    MTS   S   SES  
Sbjct: 1   MGTELMRICVKEDNDDFPSVPPGFESYTSFSLKKVENNEKQDDKNMTSCSASTSASESPS 60

Query: 359 AEMAAKLDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNISSTPQLPKGVVRG 538
            +    + + D AK+ R LRRRPWINY Q  N S E+ D E+ DQN SS P LP+GV+RG
Sbjct: 61  TQAENDVQVGDTAKVPRSLRRRPWINYGQYENISDEDPDCERHDQNFSSRPCLPRGVIRG 120

Query: 539 CTDCSN 556
           C DCSN
Sbjct: 121 CPDCSN 126


>ref|XP_003535393.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
           max]
          Length = 1257

 Score =  122 bits (306), Expect = 4e-26
 Identities = 67/126 (53%), Positives = 82/126 (65%), Gaps = 6/126 (4%)
 Frame = +2

Query: 197 MGTECIRTCVKEEIVD-PSVPPGFESLTSFILKKMDDCEVK----MTSIP-SVGVSESQP 358
           MGTE +R CVKE+  D PSVPPGFES TSF LK+++  E +    MTS   S   SES  
Sbjct: 1   MGTELMRICVKEDNDDFPSVPPGFESYTSFSLKRVESNEKQDDKNMTSCSASTSASESPS 60

Query: 359 AEMAAKLDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNISSTPQLPKGVVRG 538
            ++   +   D  K+ R LRRRPWINY Q  N S E+ D EQ+DQN SS P LP+GV+RG
Sbjct: 61  TQVENDVQGGDTRKVPRSLRRRPWINYGQYENISDEDPDCEQLDQNFSSRPCLPRGVIRG 120

Query: 539 CTDCSN 556
           C DCS+
Sbjct: 121 CPDCSH 126


>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
           gi|223538780|gb|EEF40380.1| transcription factor,
           putative [Ricinus communis]
          Length = 1202

 Score =  114 bits (286), Expect = 8e-24
 Identities = 61/123 (49%), Positives = 79/123 (64%), Gaps = 8/123 (6%)
 Frame = +2

Query: 212 IRTCVKEEIVD-PSVPPGFESLTSFILKKMDDCE-------VKMTSIPSVGVSESQPAEM 367
           +R C+KEE  + PSVPPGFES  +F LK++ D E       V+ +S  S   SESQP +M
Sbjct: 1   MRVCIKEESDEIPSVPPGFESFAAFTLKRVQDSENHESQNIVRFSS--SSSASESQPVKM 58

Query: 368 AAKLDISDNAKLTRCLRRRPWINYNQLNNSSGEESDSEQIDQNISSTPQLPKGVVRGCTD 547
             + DI    K TR LRRR WINY QL N SG+ESDS +++Q+++    LPKGV+RGC  
Sbjct: 59  EMESDIGTVTKATRSLRRRAWINYGQLENCSGDESDSGKLNQDLTLRSHLPKGVIRGCAQ 118

Query: 548 CSN 556
           C N
Sbjct: 119 CMN 121


Top