BLASTX nr result

ID: Coptis24_contig00023478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023478
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537796.1| PREDICTED: uncharacterized protein LOC100797...    97   2e-18
ref|XP_002518814.1| conserved hypothetical protein [Ricinus comm...    94   9e-18
gb|AFK39057.1| unknown [Lotus japonicus]                               93   3e-17
ref|XP_003540781.1| PREDICTED: uncharacterized protein LOC100807...    92   3e-17
gb|ACU23392.1| unknown [Glycine max]                                   91   7e-17

>ref|XP_003537796.1| PREDICTED: uncharacterized protein LOC100797061 [Glycine max]
          Length = 287

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/99 (53%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
 Frame = -3

Query: 291 TGDSSIPALNLHHYRHSMSFQSPPGTSSKAPMMMAS--GLNPDVELAVEWSPDEQAVLED 118
           +G+SSI    ++     M   S  G  S + +++ S  GL  D  LAVEWS DEQ  LE+
Sbjct: 57  SGNSSI----INSSNPVMGQMSQAGNLSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEE 112

Query: 117 GLFKYADEPNIFKYIKISAALPEKTVRDVALRCRWMTKK 1
           GL KYADEP+I +YIKI+A LP+KTVRDVALRCRW+T+K
Sbjct: 113 GLAKYADEPSIMRYIKIAALLPDKTVRDVALRCRWLTRK 151


>ref|XP_002518814.1| conserved hypothetical protein [Ricinus communis]
           gi|223542195|gb|EEF43739.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 304

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/81 (59%), Positives = 58/81 (71%), Gaps = 6/81 (7%)
 Frame = -3

Query: 225 PPGT------SSKAPMMMASGLNPDVELAVEWSPDEQAVLEDGLFKYADEPNIFKYIKIS 64
           PPG       +S   +  A GL  D  LAVEWS DEQ +LE+GL K+ADEP+I +YIKI+
Sbjct: 69  PPGIPHVNSCASSLLLDSAPGLKHDTGLAVEWSVDEQIILEEGLSKFADEPSIMRYIKIA 128

Query: 63  AALPEKTVRDVALRCRWMTKK 1
           A L +KTVRDVALRCRWMT+K
Sbjct: 129 ATLRDKTVRDVALRCRWMTRK 149


>gb|AFK39057.1| unknown [Lotus japonicus]
          Length = 213

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246 HSMSFQSPPGTSSKAPMMM--ASGLNPDVELAVEWSPDEQAVLEDGLFKYADEPNIFKYI 73
           +S    S  G S  + +M+  A GL  D  LAVEWS DEQ  L++GL  YADEP+I +YI
Sbjct: 28  NSNPVMSQVGNSPGSSLMLDSAPGLKHDTGLAVEWSVDEQYKLKEGLANYADEPSIMRYI 87

Query: 72  KISAALPEKTVRDVALRCRWMTKK 1
           KI+ +LP+KTVRDVALRCRW+T+K
Sbjct: 88  KIAVSLPDKTVRDVALRCRWLTRK 111


>ref|XP_003540781.1| PREDICTED: uncharacterized protein LOC100807371 isoform 1 [Glycine
           max] gi|356544694|ref|XP_003540782.1| PREDICTED:
           uncharacterized protein LOC100807371 isoform 2 [Glycine
           max]
          Length = 281

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246 HSMSFQSPPGTSSKAPMMMAS--GLNPDVELAVEWSPDEQAVLEDGLFKYADEPNIFKYI 73
           +S    S  G  S + +++ S  GL  D  LAVEWS DEQ  LE+ L +YADEP+I +YI
Sbjct: 62  NSNPVMSQAGNPSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEDLARYADEPSIMRYI 121

Query: 72  KISAALPEKTVRDVALRCRWMTKK 1
           KI+A LP+KTVRDVALRCRW+T+K
Sbjct: 122 KIAALLPDKTVRDVALRCRWLTRK 145


>gb|ACU23392.1| unknown [Glycine max]
          Length = 297

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246 HSMSFQSPPGTSSKAPMMMAS--GLNPDVELAVEWSPDEQAVLEDGLFKYADEPNIFKYI 73
           +S    S  G  S + +++ S  GL  D  LAVEWS DEQ  LE+ L +YADEP+I +YI
Sbjct: 62  NSNPVMSQAGNPSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEDLARYADEPSIMRYI 121

Query: 72  KISAALPEKTVRDVALRCRWMTKK 1
           KI+A LP++TVRDVALRCRW+T+K
Sbjct: 122 KIAALLPDRTVRDVALRCRWLTRK 145


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