BLASTX nr result

ID: Coptis24_contig00023430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023430
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280214.1| PREDICTED: nudix hydrolase 8-like [Vitis vin...   288   5e-76
emb|CBI27973.3| unnamed protein product [Vitis vinifera]              288   5e-76
ref|XP_002330497.1| predicted protein [Populus trichocarpa] gi|2...   276   3e-72
ref|XP_002514190.1| mutt domain protein, putative [Ricinus commu...   274   1e-71
ref|XP_003608666.1| Nudix hydrolase [Medicago truncatula] gi|355...   247   1e-63

>ref|XP_002280214.1| PREDICTED: nudix hydrolase 8-like [Vitis vinifera]
          Length = 346

 Score =  288 bits (738), Expect = 5e-76
 Identities = 133/182 (73%), Positives = 161/182 (88%)
 Frame = -3

Query: 661 VMLTYWIPDEPCLLPDSPSHHIGVGAFVINENREVLVVKEKQCPCHCAGLWKLPTGYINK 482
           VMLTYW+P+EPCLLP SPSH IG+G FV+N  REVLVVKEK CPC C+G+WKLPTGYINK
Sbjct: 162 VMLTYWLPNEPCLLPASPSHQIGIGGFVMNHKREVLVVKEK-CPCSCSGVWKLPTGYINK 220

Query: 481 SEELFSGAVREVKEETGIDTAFLEVIAFRHAHRMAFEKSDLLFLCMLKPSSSDIKIDEKE 302
           SEE+FSGAVREVKEETGIDT FLE++AFRHAH +AFE+SDLLF+CMLKP + +I +DEKE
Sbjct: 221 SEEIFSGAVREVKEETGIDTIFLEMVAFRHAHLVAFEQSDLLFVCMLKPLTFEITVDEKE 280

Query: 301 IQAAKWMPLKEFVTQPFFQEDHMLKRVIDISVATYENHYHGFHANQLISKLDGQLSRLYY 122
           IQAAKWMPL EFV+QPF++EDHM ++VIDI ++ Y+N Y+GF A+Q+ SKLD +LS LYY
Sbjct: 281 IQAAKWMPLDEFVSQPFYKEDHMSRKVIDICISKYDNRYNGFIAHQMTSKLDRKLSYLYY 340

Query: 121 ND 116
           N+
Sbjct: 341 NE 342


>emb|CBI27973.3| unnamed protein product [Vitis vinifera]
          Length = 221

 Score =  288 bits (738), Expect = 5e-76
 Identities = 133/182 (73%), Positives = 161/182 (88%)
 Frame = -3

Query: 661 VMLTYWIPDEPCLLPDSPSHHIGVGAFVINENREVLVVKEKQCPCHCAGLWKLPTGYINK 482
           VMLTYW+P+EPCLLP SPSH IG+G FV+N  REVLVVKEK CPC C+G+WKLPTGYINK
Sbjct: 37  VMLTYWLPNEPCLLPASPSHQIGIGGFVMNHKREVLVVKEK-CPCSCSGVWKLPTGYINK 95

Query: 481 SEELFSGAVREVKEETGIDTAFLEVIAFRHAHRMAFEKSDLLFLCMLKPSSSDIKIDEKE 302
           SEE+FSGAVREVKEETGIDT FLE++AFRHAH +AFE+SDLLF+CMLKP + +I +DEKE
Sbjct: 96  SEEIFSGAVREVKEETGIDTIFLEMVAFRHAHLVAFEQSDLLFVCMLKPLTFEITVDEKE 155

Query: 301 IQAAKWMPLKEFVTQPFFQEDHMLKRVIDISVATYENHYHGFHANQLISKLDGQLSRLYY 122
           IQAAKWMPL EFV+QPF++EDHM ++VIDI ++ Y+N Y+GF A+Q+ SKLD +LS LYY
Sbjct: 156 IQAAKWMPLDEFVSQPFYKEDHMSRKVIDICISKYDNRYNGFIAHQMTSKLDRKLSYLYY 215

Query: 121 ND 116
           N+
Sbjct: 216 NE 217


>ref|XP_002330497.1| predicted protein [Populus trichocarpa] gi|222872431|gb|EEF09562.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  276 bits (705), Expect = 3e-72
 Identities = 127/181 (70%), Positives = 154/181 (85%)
 Frame = -3

Query: 661 VMLTYWIPDEPCLLPDSPSHHIGVGAFVINENREVLVVKEKQCPCHCAGLWKLPTGYINK 482
           VMLTYWIPD PC+LP SPSH IGVG FVIN+ +EVL VKEK CPC C+ +WK+PTGYINK
Sbjct: 98  VMLTYWIPDYPCMLPTSPSHQIGVGGFVINDKKEVLAVKEK-CPCSCSNVWKMPTGYINK 156

Query: 481 SEELFSGAVREVKEETGIDTAFLEVIAFRHAHRMAFEKSDLLFLCMLKPSSSDIKIDEKE 302
           SE++F GA+REVKEETG+DT+FL+++AFRHAH +AFEKSD+LF+CML+P S +I IDEKE
Sbjct: 157 SEDIFCGAMREVKEETGVDTSFLKMVAFRHAHMLAFEKSDILFVCMLRPLSYEIAIDEKE 216

Query: 301 IQAAKWMPLKEFVTQPFFQEDHMLKRVIDISVATYENHYHGFHANQLISKLDGQLSRLYY 122
           IQAA WMPL EFV QPF++EDHM ++VI+  VA YE+ Y GF A+QL SKLDGQ S LYY
Sbjct: 217 IQAAMWMPLDEFVGQPFYEEDHMSRKVIEACVAAYEDRYSGFTAHQLTSKLDGQSSLLYY 276

Query: 121 N 119
           +
Sbjct: 277 D 277


>ref|XP_002514190.1| mutt domain protein, putative [Ricinus communis]
           gi|223546646|gb|EEF48144.1| mutt domain protein,
           putative [Ricinus communis]
          Length = 343

 Score =  274 bits (701), Expect = 1e-71
 Identities = 128/186 (68%), Positives = 152/186 (81%)
 Frame = -3

Query: 661 VMLTYWIPDEPCLLPDSPSHHIGVGAFVINENREVLVVKEKQCPCHCAGLWKLPTGYINK 482
           +MLTYWIP  PCLLP SPSHHIGVG FVIN+ RE+L VKEK C C C+G WK+PTGYINK
Sbjct: 159 IMLTYWIPVGPCLLPGSPSHHIGVGGFVINDKREILAVKEK-CSCSCSGFWKMPTGYINK 217

Query: 481 SEELFSGAVREVKEETGIDTAFLEVIAFRHAHRMAFEKSDLLFLCMLKPSSSDIKIDEKE 302
           SE+LFSGA+REVKEETG+DT FL+++AFRHAH +AFEKSDLLF+C+LKP S +I IDE E
Sbjct: 218 SEDLFSGAIREVKEETGVDTIFLKLVAFRHAHLVAFEKSDLLFMCLLKPLSDEITIDENE 277

Query: 301 IQAAKWMPLKEFVTQPFFQEDHMLKRVIDISVATYENHYHGFHANQLISKLDGQLSRLYY 122
           I+ AKWM L EF+ QPF+Q DHM +R I   VA YE+HY GF A+QL SKLDG+LS LYY
Sbjct: 278 IEDAKWMGLDEFMKQPFYQADHMSRRAIQACVAAYEDHYSGFTAHQLTSKLDGKLSYLYY 337

Query: 121 NDWIKF 104
           ++   F
Sbjct: 338 DNSSSF 343


>ref|XP_003608666.1| Nudix hydrolase [Medicago truncatula] gi|355509721|gb|AES90863.1|
           Nudix hydrolase [Medicago truncatula]
           gi|388508944|gb|AFK42538.1| unknown [Medicago
           truncatula]
          Length = 357

 Score =  247 bits (631), Expect = 1e-63
 Identities = 112/181 (61%), Positives = 142/181 (78%)
 Frame = -3

Query: 661 VMLTYWIPDEPCLLPDSPSHHIGVGAFVINENREVLVVKEKQCPCHCAGLWKLPTGYINK 482
           VMLTYWIP+ PC+LP + SH +G+G FVIN+N EVLVV+EK C     GLWK+PTG+I++
Sbjct: 165 VMLTYWIPEGPCMLPANASHQVGIGGFVINQNNEVLVVQEKHCSPATLGLWKIPTGFIHE 224

Query: 481 SEELFSGAVREVKEETGIDTAFLEVIAFRHAHRMAFEKSDLLFLCMLKPSSSDIKIDEKE 302
           +EE+++GAVREVKEETGIDT F+EVIAFRH H +AFEKSDL F+CMLKP SS I +D+ E
Sbjct: 225 AEEIYTGAVREVKEETGIDTEFIEVIAFRHVHNVAFEKSDLFFICMLKPLSSTITVDDLE 284

Query: 301 IQAAKWMPLKEFVTQPFFQEDHMLKRVIDISVATYENHYHGFHANQLISKLDGQLSRLYY 122
           I AAKWMPL EFV QP  QED M K+++DI +A     Y G   +Q++SK DG+++ LYY
Sbjct: 285 IDAAKWMPLVEFVEQPLIQEDSMFKKIVDIFIARLGKRYCGLSTHQVVSKFDGKITSLYY 344

Query: 121 N 119
           N
Sbjct: 345 N 345


Top