BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023412
         (1743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop...   327   5e-87
emb|CBI28315.3| unnamed protein product [Vitis vinifera]              324   4e-86
ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleop...   318   4e-84
ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|2...   317   6e-84
ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228...   313   1e-82

>ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis
            vinifera]
          Length = 503

 Score =  327 bits (839), Expect = 5e-87
 Identities = 175/323 (54%), Positives = 215/323 (66%), Gaps = 7/323 (2%)
 Frame = +2

Query: 776  PVEPDEQVDLNGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSVDGAASQ 955
            P+E DE+VDL+ DND                                      V+    +
Sbjct: 26   PIESDERVDLDEDNDPDEAMDEEVEYEEVEVEEEVEEVEEEVEEEEVEEEEEEVEEEEEE 85

Query: 956  PKPSGDEETRA-----GKA-DEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSE 1117
             + +  +E ++     GK  DEDES KHAELL+LPPHGSEVYVGG+  DASE+DL+SF E
Sbjct: 86   EEANEADEQKSPSGGGGKIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCE 145

Query: 1118 SVGEIIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNR 1297
            SVGE+ EVRI+KGKDSGENKG+AFVTF++ ELASKAI +LNNTEFKGRKIKCS SQ K+R
Sbjct: 146  SVGEVTEVRIMKGKDSGENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHR 205

Query: 1298 LFIGNIPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQ 1477
            LFIGN+P+SW ++D++K            +LVKD +NS+ NRGFAFI+YYN ACAEY+RQ
Sbjct: 206  LFIGNVPRSWGEEDIKKVVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQ 265

Query: 1478 KMSNPEFKLDNNAPTVXXXXXXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEIT 1657
            KM NP+FKLDNNAPTV              QVKAVYVKNLPK+I QD+LK+LF+HHG+IT
Sbjct: 266  KMMNPKFKLDNNAPTVSWADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKIT 325

Query: 1658 KVVL-PKDINQDKLKKLFKHHGE 1723
            KVVL P    Q+K +  F H  E
Sbjct: 326  KVVLPPAKSGQEKSRIGFVHFAE 348


>emb|CBI28315.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  324 bits (831), Expect = 4e-86
 Identities = 163/251 (64%), Positives = 193/251 (76%), Gaps = 1/251 (0%)
 Frame = +2

Query: 974  EETRAGKADEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGEIIEVRIVK 1153
            EE      DEDES KHAELL+LPPHGSEVYVGG+  DASE+DL+SF ESVGE+ EVRI+K
Sbjct: 29   EEEEEEIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMK 88

Query: 1154 GKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIGNIPKSWVK 1333
            GKDSGENKG+AFVTF++ ELASKAI +LNNTEFKGRKIKCS SQ K+RLFIGN+P+SW +
Sbjct: 89   GKDSGENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGE 148

Query: 1334 QDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSNPEFKLDNN 1513
            +D++K            +LVKD +NS+ NRGFAFI+YYN ACAEY+RQKM NP+FKLDNN
Sbjct: 149  EDIKKVVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNN 208

Query: 1514 APTVXXXXXXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKVVL-PKDINQD 1690
            APTV              QVKAVYVKNLPK+I QD+LK+LF+HHG+ITKVVL P    Q+
Sbjct: 209  APTVSWADPKNADSSPASQVKAVYVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQE 268

Query: 1691 KLKKLFKHHGE 1723
            K +  F H  E
Sbjct: 269  KSRIGFVHFAE 279


>ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis vinifera]
          Length = 490

 Score =  318 bits (814), Expect = 4e-84
 Identities = 167/319 (52%), Positives = 210/319 (65%), Gaps = 3/319 (0%)
 Frame = +2

Query: 776  PVEPDEQVDLNGDN-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSVDGAAS 952
            P EP+E+VDL+GDN D                                         A +
Sbjct: 27   PAEPEERVDLDGDNEDTKEEEVESEEVEEEVEEIEEEEEEEVEEEVEEDEEEEDTYFADA 86

Query: 953  QPKPSGDEETRAGKADED-ESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGE 1129
            Q  P GD+E ++ K + D E+ +HAELL+LPPHGSEVY+GG+P++ASE+DLR F E VGE
Sbjct: 87   QKDPDGDDEIKSAKGEVDNENRRHAELLALPPHGSEVYLGGIPNNASEEDLRGFCEPVGE 146

Query: 1130 IIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIG 1309
            + EVRI+KGKDS E KGYAFVTF++KELASKA+ +LNN E KGRKIKCSASQVK+RLFI 
Sbjct: 147  VTEVRILKGKDSAETKGYAFVTFRTKELASKAMEELNNAEIKGRKIKCSASQVKHRLFIS 206

Query: 1310 NIPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSN 1489
            N+P++W ++D++K            DL KDPQNS+RNRGFAFIEYYN ACAEY+R+KMSN
Sbjct: 207  NVPRTWEEEDMKKVVTEIGPGVNLVDLWKDPQNSSRNRGFAFIEYYNHACAEYSRKKMSN 266

Query: 1490 PEFKLDNNAPTVXXXXXXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKVVL 1669
            P+FKLDNNA TV              QVKAVY+KNLPK + QD+L++LF  HG+ITKVV+
Sbjct: 267  PKFKLDNNASTVSWADPKNVESSAASQVKAVYIKNLPKYMTQDQLRELFGQHGKITKVVI 326

Query: 1670 -PKDINQDKLKKLFKHHGE 1723
             P    Q+  +  F H  E
Sbjct: 327  PPAKAGQENCRFGFVHFAE 345


>ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|222854448|gb|EEE91995.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  317 bits (812), Expect = 6e-84
 Identities = 153/243 (62%), Positives = 191/243 (78%), Gaps = 1/243 (0%)
 Frame = +2

Query: 947  ASQPKPS-GDEETRAGKADEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESV 1123
            A  PK S GDEE       EDE  KH+ELL+LPPHGSEVY+GG+P DASE+DL+ F ES+
Sbjct: 39   ADSPKGSDGDEE-------EDEHRKHSELLALPPHGSEVYLGGIPPDASEEDLKEFCESI 91

Query: 1124 GEIIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLF 1303
            GE+ E+RI+KGKDS E+KGYAFVTF++KELASKAI +LNNTEFKG+K+KCS SQ  +RLF
Sbjct: 92   GEVTEIRIMKGKDSSESKGYAFVTFRTKELASKAIEELNNTEFKGKKVKCSTSQANHRLF 151

Query: 1304 IGNIPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKM 1483
            IGN+P++W ++D++K            +L+KDPQN +RNRGFAFIEYYN ACAEY+R+ M
Sbjct: 152  IGNVPRNWGEEDMKKAVKKTGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYSRKMM 211

Query: 1484 SNPEFKLDNNAPTVXXXXXXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKV 1663
            S+PEFKLD+NAPTV              QVKAVYVKNLP+DINQD+L++LF+HHG++TKV
Sbjct: 212  SSPEFKLDDNAPTVSWADPKNAGSSAASQVKAVYVKNLPEDINQDRLRQLFEHHGKVTKV 271

Query: 1664 VLP 1672
            VLP
Sbjct: 272  VLP 274


>ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
          Length = 828

 Score =  313 bits (801), Expect = 1e-82
 Identities = 153/243 (62%), Positives = 189/243 (77%), Gaps = 1/243 (0%)
 Frame = +2

Query: 998  DEDESHKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGEIIEVRIVKGKDSGENK 1177
            DEDE+ KHAELL+LPPHGSEVYVGG+P D+SEDDLR F ES+GE+ EVR+++ K+S ENK
Sbjct: 421  DEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENK 480

Query: 1178 GYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIGNIPKSWVKQDLEKXXX 1357
            G+AFVTF+S ELASKAI +LNNTEFKG+KIKCS+SQ K+RLFIGN+P+SW ++DL+K   
Sbjct: 481  GFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVT 540

Query: 1358 XXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSNPEFKLDNNAPTVXXXX 1537
                     +LVKD +N++ NRGFAFI+YYN ACAEY+RQKM NP+FKLD+NAPTV    
Sbjct: 541  EIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWAD 600

Query: 1538 XXXXXXXXXXQVKAVYVKNLPKDINQDKLKKLFKHHGEITKVVL-PKDINQDKLKKLFKH 1714
                      QVKAVYVKNLPK++ Q++LKKLF HHG+ITKVVL P    Q+K +  F H
Sbjct: 601  PKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVH 660

Query: 1715 HGE 1723
              E
Sbjct: 661  FSE 663