BLASTX nr result
ID: Coptis24_contig00023363
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00023363
(486 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247... 61 9e-15
emb|CBI39598.3| unnamed protein product [Vitis vinifera] 56 2e-13
emb|CAN71817.1| hypothetical protein VITISV_023422 [Vitis vinifera] 55 2e-12
ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246... 54 1e-11
emb|CAN74590.1| hypothetical protein VITISV_041993 [Vitis vinifera] 54 2e-11
>ref|XP_002282065.2| PREDICTED: uncharacterized protein LOC100247652 [Vitis vinifera]
Length = 584
Score = 60.8 bits (146), Expect(2) = 9e-15
Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Frame = +1
Query: 154 GVAGKKTDKSEXXXXXXXXXXXXXLDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYADG 333
G + K+ K E LD DD NDEEI+YLEKL++ KV++D Y D
Sbjct: 265 GFSMKQAGKYEPVRKSKRVPKKRVLDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDE 324
Query: 334 ED---KHQRKVLR-------DGKKSRSERQSENKD-LVEEELISD--------VLQKDYI 456
E+ + QRK+ R KKSRS R E+ D + EEE +SD L+K+++
Sbjct: 325 EEDGGRKQRKISRVLKRNGNGHKKSRSGRAYEDIDYMEEEEALSDGEPETKKKKLRKEFV 384
Query: 457 YSSVGAKKEM 486
SS +K+EM
Sbjct: 385 DSSGDSKREM 394
Score = 43.9 bits (102), Expect(2) = 9e-15
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 18 EDTMDIDNTSKPV--SGLQGVLWKDFSGGSFSLRKKGSSKNKMLGDG 152
+D D DN+ PV SGL+GV WKDFS FS+ K S K KM +G
Sbjct: 219 QDDSDDDNSPPPVKGSGLRGVPWKDFSRSGFSVAKGDSLKGKMPEEG 265
>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 56.2 bits (134), Expect(2) = 2e-13
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 36/147 (24%)
Frame = +1
Query: 154 GVAGKKTDKSEXXXXXXXXXXXXXLDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYADG 333
G + K+ K E LD DD NDEEI+YLEKL++ KV++D Y D
Sbjct: 265 GFSMKQAGKYEPVRKSKRVPKKRVLDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDE 324
Query: 334 ED---KHQRKVLR------------------------DGKKSRSERQSENKD-LVEEELI 429
E+ + QRK+ R + KKSRS R E+ D + EEE +
Sbjct: 325 EEDGGRKQRKISRVLKRNGNGQYNVDVGDFGSSKGSKESKKSRSGRAYEDIDYMEEEEAL 384
Query: 430 SD--------VLQKDYIYSSVGAKKEM 486
SD L+K+++ SS +K+EM
Sbjct: 385 SDGEPETKKKKLRKEFVDSSGDSKREM 411
Score = 43.9 bits (102), Expect(2) = 2e-13
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 18 EDTMDIDNTSKPV--SGLQGVLWKDFSGGSFSLRKKGSSKNKMLGDG 152
+D D DN+ PV SGL+GV WKDFS FS+ K S K KM +G
Sbjct: 219 QDDSDDDNSPPPVKGSGLRGVPWKDFSRSGFSVAKGDSLKGKMPEEG 265
>emb|CAN71817.1| hypothetical protein VITISV_023422 [Vitis vinifera]
Length = 848
Score = 55.1 bits (131), Expect(2) = 2e-12
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 36/147 (24%)
Frame = +1
Query: 154 GVAGKKTDKSEXXXXXXXXXXXXXLDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYADG 333
G + K+ K E LD DD NDEEI+YLEKL++ KV++D Y D
Sbjct: 265 GFSMKQAGKYEPVRKSKRVPKKRVLDGAEDDEDNDEEIKYLEKLKTSKVSTDYGAEYEDE 324
Query: 334 ED---KHQRKVLR------------------------DGKKSRSERQSENKD-LVEEELI 429
E+ + QRK+ R + KKSRS R E+ D + EEE +
Sbjct: 325 EEDGGRKQRKISRVLKRNGNGQYNVDVGDFGSSKGSKESKKSRSGRAYEDIDYMEEEEAL 384
Query: 430 SD--------VLQKDYIYSSVGAKKEM 486
SD L+K+++ SS +K++M
Sbjct: 385 SDGEPETKKKKLRKEFVDSSGDSKRQM 411
Score = 41.6 bits (96), Expect(2) = 2e-12
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 18 EDTMDIDNTSKPV--SGLQGVLWKDFSGGSFSLRKKGSSKNKMLGDG 152
+D D DN+ PV SGL+GV WKDFS FS+ K K KM +G
Sbjct: 219 QDDSDDDNSPPPVKGSGLRGVPWKDFSRSGFSVAKGDFLKGKMPEEG 265
>ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246939 [Vitis vinifera]
Length = 586
Score = 54.3 bits (129), Expect(2) = 1e-11
Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 33/146 (22%)
Frame = +1
Query: 148 MAGVAGKKTDKSEXXXXXXXXXXXXXLDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYA 327
M ++GK+ DKS+ LD FDD D+EIRYLEKL++ KVT+ +
Sbjct: 256 MGKISGKQGDKSDPVRKSKRVPKRRVLDGAFDDD-EDDEIRYLEKLKTSKVTA----GHK 310
Query: 328 DGEDKHQRKVLR-------DG-------------KKSRSERQSENKDLVE----EELISD 435
D E++ +K R DG KKSRS+R SE+ D E EE+ISD
Sbjct: 311 DDEEESGKKPRRVSKMRAIDGKKDENLGSSKDGKKKSRSDRVSEDTDYEEEQEDEEVISD 370
Query: 436 ---------VLQKDYIYSSVGAKKEM 486
L+K+ + S +K+EM
Sbjct: 371 SELEENKMKKLRKESVDSLSESKREM 396
Score = 40.0 bits (92), Expect(2) = 1e-11
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 57 SGLQGVLWKDFSGGSFSLRKKGSSKNKMLG 146
SGLQG+ W+DFS G FSL K+ SS K+ G
Sbjct: 232 SGLQGIPWRDFSRGGFSLGKEDSSMGKISG 261
>emb|CAN74590.1| hypothetical protein VITISV_041993 [Vitis vinifera]
Length = 556
Score = 53.5 bits (127), Expect(2) = 2e-11
Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 33/146 (22%)
Frame = +1
Query: 148 MAGVAGKKTDKSEXXXXXXXXXXXXXLDEQFDDGVNDEEIRYLEKLRSLKVTSDCDFNYA 327
M ++GK+ DKS+ LD FDD D+EIRYLEKL+ KVT+ +
Sbjct: 253 MGKISGKQGDKSDPVRKSKRVPKRRVLDGAFDDD-EDDEIRYLEKLKXSKVTA----GHK 307
Query: 328 DGEDKHQRKVLR-------DG-------------KKSRSERQSENKDLVE----EELISD 435
D E++ +K R DG KKSRS+R SE+ D E EE+ISD
Sbjct: 308 DDEEESGKKPRRVSKMRAIDGKKDENLGSSKDGKKKSRSDRVSEDTDYEEEQEDEEVISD 367
Query: 436 ---------VLQKDYIYSSVGAKKEM 486
L+K+ + S +K+EM
Sbjct: 368 SELEENKMKKLRKESVDSLSESKREM 393
Score = 40.0 bits (92), Expect(2) = 2e-11
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 57 SGLQGVLWKDFSGGSFSLRKKGSSKNKMLG 146
SGLQG+ W+DFS G FSL K+ SS K+ G
Sbjct: 229 SGLQGIPWRDFSRGGFSLGKEDSSMGKISG 258