BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023271
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    75   7e-12
ref|XP_002890193.1| F-box family protein [Arabidopsis lyrata sub...    72   5e-11
ref|NP_200481.1| FBD / Leucine Rich Repeat domains containing pr...    70   1e-10
ref|NP_192778.2| F-box protein [Arabidopsis thaliana] gi|1453330...    70   2e-10
emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|72677...    70   2e-10

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/97 (41%), Positives = 56/97 (57%)
 Frame = -1

Query: 409 YSWIRALVRRNVQELDIDISTSRLPPLPLCLFTCESLTVLKLNFGCWQYPLVLPDLISLP 230
           YSWI   + R VQELD+ +       LP   F C++L V+KL+   +   L +P  + LP
Sbjct: 107 YSWICIALERRVQELDLHLLIDWRVELPPMFFICKTLVVVKLSCALF---LDIPTTVWLP 163

Query: 229 ALKTLHLKSIRFKNDNLTSNFLSSCPVLELLIIMHSE 119
           +LK LHLKS+ + +D+     LS CPVLE L+I   E
Sbjct: 164 SLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREE 200


>ref|XP_002890193.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336035|gb|EFH66452.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 452

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
 Frame = -1

Query: 415 RFYSWIRALVRRNV------QELDIDISTSRLPPLPLCLFTCESLTVLKLNFGCWQYPLV 254
           RF SWI A+++R V       E+D D     L  +PL L++CESL  L+L      Y +V
Sbjct: 102 RFKSWINAVIKRRVCHFNVHNEVDDDDDDDELFKMPLSLYSCESLVNLQL------YRVV 155

Query: 253 L--PDLISLPALKTLHLKSIRFKNDNLTSNFLSSCPVLELLIIMHSELAGMNNLTIYCSE 80
           L  P+ +SLP +K +HL  +++  D+     +S C VLE L I+      +  + +    
Sbjct: 156 LDHPESVSLPCVKIMHLDMVKYDADSTLERLISGCSVLEELTIVRDPNDSLQVVCVRSKS 215

Query: 79  LKHLVIETYSYDGEH 35
           LK   IE   Y+ E+
Sbjct: 216 LKSFKIECERYESEN 230


>ref|NP_200481.1| FBD / Leucine Rich Repeat domains containing protein [Arabidopsis
           thaliana] gi|332009414|gb|AED96797.1| FBD / Leucine Rich
           Repeat domains containing protein [Arabidopsis thaliana]
          Length = 360

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
 Frame = -1

Query: 442 GCCC----DVATLRFYSWIRALVRRNVQELDIDI-STSRLPPLPLCLFTCESLTVLKLNF 278
           GC C        +   SW+R  V R V+EL I +  T+    LP  L+TC+SL  LKL +
Sbjct: 38  GCGCPNSSSTLVMDLKSWVRIAVSRCVRELSISLHDTTAAVSLPSSLYTCKSLVTLKL-Y 96

Query: 277 GCWQYPLVLPDLISLPALKTLHLKSIRFKNDNLTSNFLSSCPVLELLIIMHSELAGMNNL 98
           G  +  L +P  + LP+LKTL L+ +R+ +++     LS CPVLE L I+  +   +  L
Sbjct: 97  GK-KVLLDVPRTVFLPSLKTLQLERLRYSDEDSLRLLLSYCPVLEDLSIVREDYDNLRAL 155

Query: 97  TIYCSELKHLVIE 59
            +    L+ L +E
Sbjct: 156 VVIVPSLQRLSLE 168


>ref|NP_192778.2| F-box protein [Arabidopsis thaliana]
           gi|145333003|ref|NP_001078367.1| F-box protein
           [Arabidopsis thaliana]
           gi|142989615|sp|Q9SV82.2|FBD40_ARATH RecName:
           Full=FBD-associated F-box protein At4g10400
           gi|119935957|gb|ABM06044.1| At4g10400 [Arabidopsis
           thaliana] gi|332657476|gb|AEE82876.1| F-box protein
           [Arabidopsis thaliana] gi|332657477|gb|AEE82877.1| F-box
           protein [Arabidopsis thaliana]
          Length = 409

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
 Frame = -1

Query: 403 WIRALVRRNVQELDIDIST--SRLPPLPLCLFTCESLTVLKLNFGCWQYPLVLPDLISLP 230
           W+   V R ++EL I  S    +   LP  L+TC+SL +LKL+ G     L +P ++ LP
Sbjct: 95  WVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVL---LDVPRMVCLP 151

Query: 229 ALKTLHLKSIRFKNDNLTSNFLSSCPVLELLIIMHSELAGMNNLTIYCSELKHLVIETYS 50
           +LKTL LK +R+         L +CPVLE L++  S    M  LT+    L+ L + T S
Sbjct: 152 SLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPS 211


>emb|CAB39793.1| putative protein [Arabidopsis thaliana] gi|7267737|emb|CAB78163.1|
           putative protein [Arabidopsis thaliana]
          Length = 326

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
 Frame = -1

Query: 403 WIRALVRRNVQELDIDIST--SRLPPLPLCLFTCESLTVLKLNFGCWQYPLVLPDLISLP 230
           W+   V R ++EL I  S    +   LP  L+TC+SL +LKL+ G     L +P ++ LP
Sbjct: 95  WVVVAVSRYIRELKIYSSHYGEKQNILPSSLYTCKSLVILKLDGGVL---LDVPRMVCLP 151

Query: 229 ALKTLHLKSIRFKNDNLTSNFLSSCPVLELLIIMHSELAGMNNLTIYCSELKHLVIETYS 50
           +LKTL LK +R+         L +CPVLE L++  S    M  LT+    L+ L + T S
Sbjct: 152 SLKTLELKGVRYFKQGSLQRLLCNCPVLEDLVVNLSHHDNMGKLTVIVPSLQRLSLSTPS 211