BLASTX nr result

ID: Coptis24_contig00023129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023129
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27184.3| unnamed protein product [Vitis vinifera]              117   4e-24
ref|XP_002276461.1| PREDICTED: protein NAP1-like [Vitis vinifera]     117   4e-24
ref|XP_002523639.1| conserved hypothetical protein [Ricinus comm...   114   3e-23
ref|XP_003556250.1| PREDICTED: protein NAP1-like [Glycine max]        113   6e-23
ref|XP_002881375.1| GRL/NAP1 [Arabidopsis lyrata subsp. lyrata] ...   108   1e-21

>emb|CBI27184.3| unnamed protein product [Vitis vinifera]
          Length = 1392

 Score =  117 bits (292), Expect = 4e-24
 Identities = 70/144 (48%), Positives = 92/144 (63%), Gaps = 6/144 (4%)
 Frame = +2

Query: 395 MAKSRQHFA------SPTSARSREWDRPTR*FEHLTSKMNSPAMSLSWKPESSEG*PQEF 556
           MAKSRQHFA      SPT+ RSREWD P+R  E+L  ++ SP  + S +  SS+G  Q  
Sbjct: 1   MAKSRQHFANQDASLSPTAGRSREWDGPSRWSEYLNLQVTSPMTARSHRNVSSDGQAQSS 60

Query: 557 GRSQKGLNMHTNIQYYHLSQMVCLAKMYRLNQILGYANPVSYVCSLRIVSE*FWKAGVIP 736
             S KGLNM   +Q   +++ + +AKMYRLNQIL + + V++V      SE FWKAGV P
Sbjct: 61  SGSHKGLNMQYVVQLTQVAEGL-MAKMYRLNQILDFPDSVNHV-----FSEAFWKAGVFP 114

Query: 737 NHLKICLLISKNFLEHPSILQLDR 808
           N  +IC+L+SK F EH   LQL+R
Sbjct: 115 NCPRICVLLSKKFPEHHIKLQLER 138


>ref|XP_002276461.1| PREDICTED: protein NAP1-like [Vitis vinifera]
          Length = 1386

 Score =  117 bits (292), Expect = 4e-24
 Identities = 70/144 (48%), Positives = 92/144 (63%), Gaps = 6/144 (4%)
 Frame = +2

Query: 395 MAKSRQHFA------SPTSARSREWDRPTR*FEHLTSKMNSPAMSLSWKPESSEG*PQEF 556
           MAKSRQHFA      SPT+ RSREWD P+R  E+L  ++ SP  + S +  SS+G  Q  
Sbjct: 1   MAKSRQHFANQDASLSPTAGRSREWDGPSRWSEYLNLQVTSPMTARSHRNVSSDGQAQSS 60

Query: 557 GRSQKGLNMHTNIQYYHLSQMVCLAKMYRLNQILGYANPVSYVCSLRIVSE*FWKAGVIP 736
             S KGLNM   +Q   +++ + +AKMYRLNQIL + + V++V      SE FWKAGV P
Sbjct: 61  SGSHKGLNMQYVVQLTQVAEGL-MAKMYRLNQILDFPDSVNHV-----FSEAFWKAGVFP 114

Query: 737 NHLKICLLISKNFLEHPSILQLDR 808
           N  +IC+L+SK F EH   LQL+R
Sbjct: 115 NCPRICVLLSKKFPEHHIKLQLER 138


>ref|XP_002523639.1| conserved hypothetical protein [Ricinus communis]
           gi|223537091|gb|EEF38725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 823

 Score =  114 bits (285), Expect = 3e-23
 Identities = 69/144 (47%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
 Frame = +2

Query: 395 MAKSRQHF------ASPTSARSREWDRPTR*FEHLTSKMNSPAMSLSWKPESSEG*PQEF 556
           MAKSRQ         SPT ARSREW+ P+R  E+L+  M SP    + +    +G  Q  
Sbjct: 1   MAKSRQDVYVRDASLSPTGARSREWEGPSRWTEYLSPDMTSPMAFRTSRNRGPDGQVQSS 60

Query: 557 GRSQKGLNMHTNIQYYHLSQMVCLAKMYRLNQILGYANPVSYVCSLRIVSE*FWKAGVIP 736
           G S KGLN+   +Q   +++ + +AKMYRLNQIL Y +PV +V      SE FWKAGV P
Sbjct: 61  GGSHKGLNLQWVVQLTEVAEGL-MAKMYRLNQILDYPDPVGHV-----FSEAFWKAGVFP 114

Query: 737 NHLKICLLISKNFLEHPSILQLDR 808
           N+ +ICLL+SK F EH S LQL+R
Sbjct: 115 NYPRICLLLSKRFPEHFSKLQLER 138


>ref|XP_003556250.1| PREDICTED: protein NAP1-like [Glycine max]
          Length = 1388

 Score =  113 bits (282), Expect = 6e-23
 Identities = 69/146 (47%), Positives = 94/146 (64%), Gaps = 8/146 (5%)
 Frame = +2

Query: 395 MAKSRQHFA------SPTSARSREWDRPTR*FEHLTSKMNSPAMSLSWKPESSEG*PQEF 556
           MAKSRQ F+      SPT+ARSREWD P+R  ++L  +M SP  S S +    +G  Q  
Sbjct: 1   MAKSRQKFSNQDSSLSPTAARSREWDGPSRWTDYLGPEMASPLSSSSSRNIYHDGQSQGT 60

Query: 557 --GRSQKGLNMHTNIQYYHLSQMVCLAKMYRLNQILGYANPVSYVCSLRIVSE*FWKAGV 730
              +S KG+NM   +Q   +++ + +AKMYRLNQ+L Y +P+++V      SE FWKAGV
Sbjct: 61  TPAQSHKGINMQWVVQLTEVAEGL-MAKMYRLNQLLDYPDPINHV-----FSEGFWKAGV 114

Query: 731 IPNHLKICLLISKNFLEHPSILQLDR 808
            PNH +IC+L+SK F EH S LQL+R
Sbjct: 115 FPNHPRICVLLSKKFPEHFSKLQLER 140


>ref|XP_002881375.1| GRL/NAP1 [Arabidopsis lyrata subsp. lyrata]
           gi|297327214|gb|EFH57634.1| GRL/NAP1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1426

 Score =  108 bits (271), Expect = 1e-21
 Identities = 69/144 (47%), Positives = 89/144 (61%), Gaps = 6/144 (4%)
 Frame = +2

Query: 395 MAKSRQHFAS------PTSARSREWDRPTR*FEHLTSKMNSPAMSLSWKPESSEG*PQEF 556
           MAKSRQ++ S      PTS RSREW+ P+R  E+L  +M +   S S K    +G  Q  
Sbjct: 1   MAKSRQYYPSQDESMSPTSVRSREWEGPSRWTEYLGPEMAASVSSRSSK--QIDGNLQSS 58

Query: 557 GRSQKGLNMHTNIQYYHLSQMVCLAKMYRLNQILGYANPVSYVCSLRIVSE*FWKAGVIP 736
           G S K LN+   +Q   +++ + +AKMYRLNQIL Y +PV +V      SE FWKAGV P
Sbjct: 59  GGSTKALNIQWVVQMIEVAEGL-MAKMYRLNQILEYPDPVGHV-----FSEAFWKAGVFP 112

Query: 737 NHLKICLLISKNFLEHPSILQLDR 808
           NH +IC L+SK F EH S LQL+R
Sbjct: 113 NHPRICTLLSKKFPEHFSKLQLER 136


Top