BLASTX nr result

ID: Coptis24_contig00023112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023112
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518418.1| PREDICTED: uncharacterized protein LOC100782...   333   e-104
ref|XP_003545215.1| PREDICTED: uncharacterized protein LOC100809...   328   e-103
ref|XP_002520802.1| conserved hypothetical protein [Ricinus comm...   320   e-102
ref|XP_002315128.1| predicted protein [Populus trichocarpa] gi|2...   313   e-100
ref|XP_003616715.1| hypothetical protein MTR_5g083500 [Medicago ...   311   2e-98

>ref|XP_003518418.1| PREDICTED: uncharacterized protein LOC100782905 [Glycine max]
          Length = 501

 Score =  333 bits (853), Expect(2) = e-104
 Identities = 163/292 (55%), Positives = 212/292 (72%), Gaps = 7/292 (2%)
 Frame = +1

Query: 61  MASFSFPDIWGWIQSLPPISQWQSNSMSICICCSKSTQTPLNLSITRNILNHNQS--ILC 234
           MA + F D++ WIQ+LPPI +W+++SMS+ IC + S+Q  LNL+I +N   H+QS  I  
Sbjct: 1   MAYYRFLDVFSWIQNLPPIPEWKTSSMSLSICSTNSSQPSLNLTIAKN---HHQSSRISL 57

Query: 235 TITADFKLPIFLWTSKPFSIKTHCTKLLDEETIYNLFCNFNNDVLSYGPNKTTYS-VNIP 411
            I ADF +PI LWTSKPF   T   +L D+ET+ NL  NF  ++L YG NK +   +  P
Sbjct: 58  AIVADFNIPISLWTSKPFKPSTKTMRLTDDETLSNLLVNFIEEILHYGTNKHSIPYIKFP 117

Query: 412 SLKTIGNFKDIFNLSFFTLAVLVCIYEAPQDLRCGCLDTLKSHLTSSKSREVSKLLMRLL 591
            L ++ NF+DIFNL+F TL  LVCIYEAP DLR GCL+TLK  L   +SR+ SK LM+LL
Sbjct: 118 KLDSVSNFQDIFNLAFLTLLFLVCIYEAPSDLRSGCLNTLKEQLAGCQSRQASKFLMKLL 177

Query: 592 GSNTEEQWMRSLNLAITNWIVELKES----NSNIRTPLPLFSYAMSTIGLWKVQLYCPII 759
           GSN EEQWMRS+NLAITNWIVE++++    ++ IRTP PLFSYA ST GLWKVQLYCP+I
Sbjct: 178 GSNLEEQWMRSVNLAITNWIVEIQQAHHTDHTTIRTPSPLFSYAFSTFGLWKVQLYCPVI 237

Query: 760 AMNIQTTSNTSIPERLHFSLMYHQLEGVIQLGYKVVVREKWLDVGVNVDNIR 915
            M++   +N    ERL FSL Y QLEGV+Q  YKV++RE+W+++ VN+DNIR
Sbjct: 238 NMDVVNANNHPADERLEFSLKYQQLEGVLQFNYKVIIRERWVEIVVNIDNIR 289



 Score = 75.1 bits (183), Expect(2) = e-104
 Identities = 38/79 (48%), Positives = 48/79 (60%)
 Frame = +3

Query: 969  RCDVIKLVSETLMAERGAGATEKHFPSRILLELTPTAQXXXXXXXXXXXXXXXXREIGLE 1148
            RCDV+KLV++ LM ERGAGA EKHFPSRI L+LTPT Q                 E G+E
Sbjct: 289  RCDVLKLVNDILMRERGAGAAEKHFPSRISLQLTPTLQHQVLTVSVGKSSENPRIEFGVE 348

Query: 1149 KTIEGGFDSPSSILALKMT 1205
            K IE  F+ P+  + L ++
Sbjct: 349  KGIEASFEPPNPYIGLSVS 367


>ref|XP_003545215.1| PREDICTED: uncharacterized protein LOC100809574 [Glycine max]
          Length = 502

 Score =  328 bits (841), Expect(2) = e-103
 Identities = 163/293 (55%), Positives = 208/293 (70%), Gaps = 8/293 (2%)
 Frame = +1

Query: 61  MASFSFPDIWGWIQSLPPISQWQSNSMSICICCSKSTQTPLNLSITRNILNHNQS--ILC 234
           MA + F D++ WIQ+LPPI +W++ SMS+ IC + S+Q  LNL+I +N   H+QS  I  
Sbjct: 1   MAYYRFLDVFSWIQNLPPIPEWKTASMSLSICSTNSSQPSLNLTIAKN---HHQSSRISL 57

Query: 235 TITADFKLPIFLWTSKPFSIKTHCTKLLDEETIYNLFCNFNNDVLSYGPNKTTYS--VNI 408
            I ADF +PI LWTS+PF   T   +L D+ET+ NL  NF  ++L YG NK +    +  
Sbjct: 58  AIVADFNIPISLWTSRPFKPSTKTMRLNDDETLSNLLVNFIEEILHYGSNKHSIIPYIKF 117

Query: 409 PSLKTIGNFKDIFNLSFFTLAVLVCIYEAPQDLRCGCLDTLKSHLTSSKSREVSKLLMRL 588
           P L ++ NFKDIFNL+F TL  LVCIYEAP DLR GCL TLK  L   +SR+ SK LM+L
Sbjct: 118 PKLDSVSNFKDIFNLAFVTLLFLVCIYEAPSDLRSGCLSTLKEQLAGCQSRQASKFLMKL 177

Query: 589 LGSNTEEQWMRSLNLAITNWIVELKES----NSNIRTPLPLFSYAMSTIGLWKVQLYCPI 756
           LGSN EEQWMRS+NLAITNWIVE++E+    ++  RTP PLFSYA ST GLWKVQLYCP+
Sbjct: 178 LGSNLEEQWMRSVNLAITNWIVEIQEAHHTDHTTFRTPSPLFSYAFSTFGLWKVQLYCPV 237

Query: 757 IAMNIQTTSNTSIPERLHFSLMYHQLEGVIQLGYKVVVREKWLDVGVNVDNIR 915
           I M++   +N    ERL FSL Y QLEGV+Q  YKV +RE+W+++ VN+DNIR
Sbjct: 238 INMDVVNANNHPADERLQFSLKYQQLEGVLQFNYKVTIRERWVEIVVNIDNIR 290



 Score = 74.3 bits (181), Expect(2) = e-103
 Identities = 38/79 (48%), Positives = 47/79 (59%)
 Frame = +3

Query: 969  RCDVIKLVSETLMAERGAGATEKHFPSRILLELTPTAQXXXXXXXXXXXXXXXXREIGLE 1148
            RCDV KLV++ LM ERGAGA EKHFPSRI L+LTPT Q                 E G+E
Sbjct: 290  RCDVFKLVNDILMRERGAGAAEKHFPSRISLQLTPTIQQQVLTVSVGKSSENPRIEFGVE 349

Query: 1149 KTIEGGFDSPSSILALKMT 1205
            K IE  F+ P+  + L ++
Sbjct: 350  KGIEASFEPPNPYIGLSVS 368


>ref|XP_002520802.1| conserved hypothetical protein [Ricinus communis]
           gi|223539933|gb|EEF41511.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 497

 Score =  320 bits (821), Expect(2) = e-102
 Identities = 158/287 (55%), Positives = 208/287 (72%), Gaps = 2/287 (0%)
 Frame = +1

Query: 61  MASFSFP-DIWGWIQSLPPISQWQSNSMSICICCSKSTQTP-LNLSITRNILNHNQSILC 234
           MAS  +P D++ W+Q+LPPI++WQ+NSMSICIC S S+  P LNLS+T+N+     S+  
Sbjct: 1   MASCCYPADLFSWVQNLPPITEWQTNSMSICICSSSSSFQPSLNLSVTKNL--QTPSVSF 58

Query: 235 TITADFKLPIFLWTSKPFSIKTHCTKLLDEETIYNLFCNFNNDVLSYGPNKTTYSVNIPS 414
           +I A+F L   LWTSKP    +   KLLD+ETI +   N   DVLSY  NK   S+ +P 
Sbjct: 59  SIVANFSLSFSLWTSKPIKTNSKSFKLLDDETISSFLINLIEDVLSYSSNKCKSSIRVPK 118

Query: 415 LKTIGNFKDIFNLSFFTLAVLVCIYEAPQDLRCGCLDTLKSHLTSSKSREVSKLLMRLLG 594
           L    NFKD+FNL+F T++ L+CIYEAP DLR  CL +LK+ LT+ + RE SK LM+++G
Sbjct: 119 LDFGSNFKDMFNLAFLTVSFLICIYEAPADLRSECLASLKTELTNCRLREGSKSLMKIIG 178

Query: 595 SNTEEQWMRSLNLAITNWIVELKESNSNIRTPLPLFSYAMSTIGLWKVQLYCPIIAMNIQ 774
           SN EEQWMRS+NLAITNW  EL+ +N  ++TP PLFSY+ ST   WKVQLYCP+IAM+I+
Sbjct: 179 SNLEEQWMRSINLAITNWTSELEVTNRILKTPSPLFSYSFSTFEFWKVQLYCPVIAMDIE 238

Query: 775 TTSNTSIPERLHFSLMYHQLEGVIQLGYKVVVREKWLDVGVNVDNIR 915
           ++SN    ERL FSL +HQLEGVIQ  Y+V+++EKW+DV   +DNIR
Sbjct: 239 SSSNPLADERLLFSLRHHQLEGVIQFNYRVIIQEKWVDVIATIDNIR 285



 Score = 79.3 bits (194), Expect(2) = e-102
 Identities = 41/79 (51%), Positives = 50/79 (63%)
 Frame = +3

Query: 969  RCDVIKLVSETLMAERGAGATEKHFPSRILLELTPTAQXXXXXXXXXXXXXXXXREIGLE 1148
            RCDVI+LV+ETLMA++G G  EKHFPSRI L LTP  Q                REI LE
Sbjct: 285  RCDVIRLVNETLMAKQGVGTEEKHFPSRISLHLTPIMQTNITSVSVGKSSDNPTREIELE 344

Query: 1149 KTIEGGFDSPSSILALKMT 1205
            K+IE  FD P++ L LK++
Sbjct: 345  KSIETSFDPPNTFLGLKLS 363


>ref|XP_002315128.1| predicted protein [Populus trichocarpa] gi|222864168|gb|EEF01299.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  313 bits (803), Expect(2) = e-100
 Identities = 163/289 (56%), Positives = 206/289 (71%), Gaps = 4/289 (1%)
 Frame = +1

Query: 61  MASFSFPDIWGWIQSLPPISQW-QSNSMSICICCSKSTQTPLNLSITRNILNHNQSILCT 237
           MAS  +PD+  WIQ+LPPI++W + N +SICIC S S Q  LNLS+ +N+   + +I  +
Sbjct: 1   MASCCYPDVLAWIQNLPPITRWKEKNPLSICICSSGSFQPSLNLSVAKNL--QSPTISFS 58

Query: 238 ITADFKLPIFLWTSKPFSIKTHCTKLLDEETIYNLFCNFNNDVLSYGPNKTTYSVNIPSL 417
           I AD  LPI LW+SKP        KLLD+ETI +L  N   DVL Y  NK+  S +   L
Sbjct: 59  IIADLNLPISLWSSKPIKTNPKSLKLLDDETISSLSINLIEDVLGYASNKSCSS-STKVL 117

Query: 418 KT---IGNFKDIFNLSFFTLAVLVCIYEAPQDLRCGCLDTLKSHLTSSKSREVSKLLMRL 588
           KT   + + KD FNL+F TL++L+CIYEAP DLR  CL +LK+ LT S+ R  SK LM++
Sbjct: 118 KTDSVLSHLKDTFNLAFLTLSLLICIYEAPADLRSECLASLKNQLTDSQLRGASKSLMKI 177

Query: 589 LGSNTEEQWMRSLNLAITNWIVELKESNSNIRTPLPLFSYAMSTIGLWKVQLYCPIIAMN 768
           +GSN EEQWMRSLNLAITNWI EL+ S+  ++TP PLFSY+ ST GLWKVQLYCP+IAM+
Sbjct: 178 MGSNLEEQWMRSLNLAITNWIAELQASHHTLKTPSPLFSYSFSTPGLWKVQLYCPVIAMD 237

Query: 769 IQTTSNTSIPERLHFSLMYHQLEGVIQLGYKVVVREKWLDVGVNVDNIR 915
           I+++SN    ERL FSL YHQLE VIQ  YKV+V+E W+DV VN DNIR
Sbjct: 238 IESSSNPPAHERLLFSLKYHQLECVIQFNYKVIVQENWVDVIVNTDNIR 286



 Score = 79.3 bits (194), Expect(2) = e-100
 Identities = 41/79 (51%), Positives = 49/79 (62%)
 Frame = +3

Query: 969  RCDVIKLVSETLMAERGAGATEKHFPSRILLELTPTAQXXXXXXXXXXXXXXXXREIGLE 1148
            RCDV++LV+ETLM E+GAG  EKHFPSRI L LTP  Q                REI +E
Sbjct: 286  RCDVVRLVNETLMTEQGAGTDEKHFPSRISLHLTPILQTNIISVSVGKSSANPTREIEME 345

Query: 1149 KTIEGGFDSPSSILALKMT 1205
            K IE  FD P+S L LK++
Sbjct: 346  KGIETSFDPPNSFLGLKVS 364


>ref|XP_003616715.1| hypothetical protein MTR_5g083500 [Medicago truncatula]
           gi|355518050|gb|AES99673.1| hypothetical protein
           MTR_5g083500 [Medicago truncatula]
          Length = 496

 Score =  311 bits (798), Expect(2) = 2e-98
 Identities = 157/283 (55%), Positives = 203/283 (71%), Gaps = 5/283 (1%)
 Frame = +1

Query: 82  DIWGWIQSLPPISQWQSNSMSICICCS-KSTQTPLNLSITRNILNHNQSILCTITADFKL 258
           D++ W+Q+LPPIS+W++ SMS+ +C    S+Q  LNL+I++N  + +Q +   I AD+ +
Sbjct: 8   DVFSWVQNLPPISEWKTGSMSLSLCSLLNSSQPSLNLTISKN--HQSQKLSFAIVADYNI 65

Query: 259 PIFLWTSKPFSIKTHCTKLLDEETIYNLFCNFNNDVLSYGPNKTTYSVNIPSLKTIGNFK 438
           PIFLWTSKPF       K+  EETI NL  NF  D+L+YG +K    +  P L+TI NF 
Sbjct: 66  PIFLWTSKPFKPSN---KISHEETISNLLVNFIQDILNYG-SKNNLFIKFPKLETIPNFS 121

Query: 439 DIFNLSFFTLAVLVCIYEAPQDLRCGCLDTLKSHLTSSKSREVSKLLMRLLGSNTEEQWM 618
           DIFNL+F TL  LVCIYEAP DLR GCL  LK  L+  +SR+ SKLLM+LLGSN EE+WM
Sbjct: 122 DIFNLAFLTLLFLVCIYEAPSDLRYGCLSALKEQLSGCESRKSSKLLMKLLGSNLEEKWM 181

Query: 619 RSLNLAITNWIVELKE----SNSNIRTPLPLFSYAMSTIGLWKVQLYCPIIAMNIQTTSN 786
           RS+NLAITNWIVELKE      S  RTP PLFS+A ST GLWKVQLYCP+I M++ + +N
Sbjct: 182 RSINLAITNWIVELKEVAKHHYSMFRTPSPLFSHAFSTFGLWKVQLYCPLINMDVVSANN 241

Query: 787 TSIPERLHFSLMYHQLEGVIQLGYKVVVREKWLDVGVNVDNIR 915
            +  ERL FSL Y QLEGV+Q  +K  ++EKW+++ VN+DNIR
Sbjct: 242 HAADERLQFSLKYQQLEGVLQFNHKAFIKEKWVEIMVNIDNIR 284



 Score = 75.5 bits (184), Expect(2) = 2e-98
 Identities = 38/79 (48%), Positives = 48/79 (60%)
 Frame = +3

Query: 969  RCDVIKLVSETLMAERGAGATEKHFPSRILLELTPTAQXXXXXXXXXXXXXXXXREIGLE 1148
            RCDV KLV +TLM ERGAGA+EKHFPSRI L+LTPT Q                 EIG+E
Sbjct: 284  RCDVFKLVDDTLMKERGAGASEKHFPSRISLQLTPTLQHQVLSVSVGKSSENPIMEIGME 343

Query: 1149 KTIEGGFDSPSSILALKMT 1205
            K++E  F   +  + L ++
Sbjct: 344  KSVEATFQPTNPYIGLNVS 362


Top