BLASTX nr result

ID: Coptis24_contig00023090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023090
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332860.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
emb|CBI15487.3| unnamed protein product [Vitis vinifera]               90   5e-16
ref|XP_002516765.1| wall-associated kinase, putative [Ricinus co...    89   7e-16
ref|XP_002332866.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-16
ref|XP_002332864.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14

>ref|XP_002332860.1| predicted protein [Populus trichocarpa] gi|222833662|gb|EEE72139.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
 Frame = +3

Query: 327 LYIQNPFFPSI*SGKMYSYFSPLSFISHLLLIINLFISLPIS-----FGEDDYRFLNCSR 491
           L +  P+F       + S F   +FIS +   I     + I      F  DD R++NCS 
Sbjct: 196 LMLHTPWF-------LNSLFHSFNFISTMSWFITFITMIFICGSALVFANDDERYVNCSN 248

Query: 492 GVFECGDVKHIGYPFWGKSRAQYCGHPDFELKCEEDDTIQIVIQRQSYRVLNIFENNQTL 671
             F+CGDVK +GYPFWG +R  YCG+P+ +L C + D  +I I++ +Y+VL I    +TL
Sbjct: 249 S-FDCGDVKGVGYPFWGSNRPDYCGYPELKLDCSDQDP-EITIEKLTYKVLGIDNQTRTL 306

Query: 672 RMRTMNPLNNNCPARLAN 725
            +   +   N CP  + N
Sbjct: 307 SVARKDYAENICPTLILN 324


>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = +3

Query: 396 SFISH--LLLIINLFISLPISFGEDDYRFLNCSRGVFECGDVKHIGYPFWGKSRAQYCGH 569
           SFI H  +     +FI++P+ F  D+ ++  C+  ++ECGD+K IGYPFWG  R ++CG 
Sbjct: 8   SFILHSPITTFFFIFIAIPMCFCVDNQQYEECTSSLYECGDMKGIGYPFWGDGRPKFCGQ 67

Query: 570 PDFELKCEEDDTIQIVIQRQSYRVLNIFENNQTLRMRTMNPLNNNCP 710
             FELKC+ DD   I I    +RVLNI  +   +R+   +  +  CP
Sbjct: 68  QGFELKCQNDDYPLIDIGSLEFRVLNISNSTYAMRIARKDFWDQTCP 114


>ref|XP_002516765.1| wall-associated kinase, putative [Ricinus communis]
           gi|223544138|gb|EEF45663.1| wall-associated kinase,
           putative [Ricinus communis]
          Length = 685

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
 Frame = +3

Query: 411 LLLIINLFISLPISFG--EDDYRFLNCSRGVFECGDVKHIGYPFWGKSRAQYCGHPDFEL 584
           L L I + +  P +F   + D ++LNCS+  FECG++  IGYPFWG +R QYCGHP+FEL
Sbjct: 13  LFLFITIILFRPPTFACAQIDSQYLNCSQK-FECGNITDIGYPFWGSNRPQYCGHPEFEL 71

Query: 585 KCEEDDTIQIVIQRQSYRVLNIFENNQTLRMRTMNPLNNNCPA 713
            C    T  I I+  +Y+VL I    +TL++   + ++N CP+
Sbjct: 72  NC-TGQTAVITIEELTYQVLEINSEEKTLKVARTDYIDNICPS 113


>ref|XP_002332866.1| predicted protein [Populus trichocarpa] gi|222833668|gb|EEE72145.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 45/107 (42%), Positives = 62/107 (57%)
 Frame = +3

Query: 411 LLLIINLFISLPISFGEDDYRFLNCSRGVFECGDVKHIGYPFWGKSRAQYCGHPDFELKC 590
           LLL I L       F +DD R+LNC +  F+CG++K +GYPF G  R  YCG+P FEL C
Sbjct: 6   LLLTIALVCGSAPVFADDDERYLNCMKS-FDCGNIKGVGYPFSGSDRPDYCGYPGFELGC 64

Query: 591 EEDDTIQIVIQRQSYRVLNIFENNQTLRMRTMNPLNNNCPARLANIS 731
              D  +I I R +Y++L I   ++TL +   +   N CP  L+N S
Sbjct: 65  SNQDP-EITIMRSTYKLLGINNQSRTLNVSRSDYTENLCPTLLSNTS 110


>ref|XP_002332864.1| predicted protein [Populus trichocarpa] gi|222833666|gb|EEE72143.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
 Frame = +3

Query: 411 LLLIINLFISLPIS-FGEDDYRFLNCSRGVFECGDVKHIGYPFWGKSRAQYCGHPDFELK 587
           ++ +I + +  P S F +DD R+L+C +  F+CG++K +GYPF G  R  YCG+P FEL 
Sbjct: 13  IIFLIIICVHAPSSAFSDDDERYLSCVKS-FDCGNIKGVGYPFSGSDRPDYCGYPGFELG 71

Query: 588 CEEDDTIQIVIQRQSYRVLNIFENNQTLRMRTMNPLNNNCPARLANIS 731
           C   D  +I I + SY++L I   ++TL +   +   N CP  L+N S
Sbjct: 72  CSNQDP-EITIMQLSYKLLGINNQSRTLNVSRTDYTENLCPTLLSNTS 118



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 42/126 (33%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
 Frame = +3

Query: 378 SYFSPLSFISH---------LLLIINLFISLPISFG-EDDYRFLNCSRGVFECGDVKHIG 527
           ++FSP   + H         ++ +   F+  P S    DD R+++CS  + +CGD+K +G
Sbjct: 249 AHFSPSLEMQHHLFPTKSWFIMFLTITFVHAPSSASANDDERYVSCSNSL-DCGDIKGVG 307

Query: 528 YPFWGKSRAQYCGHPDFELKCEEDDTIQIVIQRQSYRVLNIFENNQTLRMRTMNPLNNNC 707
           YPFWG +R  YCG+P+ +L C + D ++I I++ +Y+VL I   ++TL +   +   N C
Sbjct: 308 YPFWGSNRPDYCGYPELKLNCSDQD-LEITIKKLTYKVLGINNQSRTLSVARTDYAENIC 366

Query: 708 PARLAN 725
           P  + N
Sbjct: 367 PIFILN 372


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