BLASTX nr result

ID: Coptis24_contig00023063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023063
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278892.1| PREDICTED: proline synthase co-transcribed b...   404   e-110
emb|CAN80917.1| hypothetical protein VITISV_024616 [Vitis vinifera]   402   e-110
ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed b...   400   e-109
emb|CBI23205.3| unnamed protein product [Vitis vinifera]              400   e-109
ref|XP_002518437.1| proline synthetase associated protein, putat...   396   e-108

>ref|XP_002278892.1| PREDICTED: proline synthase co-transcribed bacterial homolog
           protein [Vitis vinifera] gi|297737470|emb|CBI26671.3|
           unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  404 bits (1037), Expect = e-110
 Identities = 200/242 (82%), Positives = 219/242 (90%)
 Frame = -3

Query: 990 PKMESTAITSLRSVMQRVKQSAEKSGRASNQVRVVAVSKTKPVSIINQVYQIGHRCFGEN 811
           P ME  A+T+LRS M RV+Q+AE+SGR S+QVRVVAVSKTKPVS+I QVY  GHRCFGEN
Sbjct: 4   PAMEGLAVTALRSAMLRVRQAAERSGRRSDQVRVVAVSKTKPVSLIRQVYDAGHRCFGEN 63

Query: 810 YVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAVPNLAMVESVDDEKIANRLDRVVAS 631
           YVQEI EKAPQLP+D+EWHFIG+LQSNKVKPLLAAVPNLAMVE VD+EKIAN+LDRVV+ 
Sbjct: 64  YVQEINEKAPQLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRVVSG 123

Query: 630 IGRKPLRVLVQVNTSGEESKSGVDPSGCVELAKHVKLGCPNLEFSGLMTIGMLDYTSTPE 451
           I RKPL+VLVQVNTSGE SKSGV+PSGCVELAKHVKLGCPNLEFSGLMTIGM DY+STPE
Sbjct: 124 IRRKPLKVLVQVNTSGEVSKSGVEPSGCVELAKHVKLGCPNLEFSGLMTIGMPDYSSTPE 183

Query: 450 NFKTLSRCRTEVCQALGITEEQCELSMGMSADFELAIEMGSTNVRIGSTIFGPREYPKKE 271
           NF+ L  CR EVC+ALG+ EEQCELSMGMS DFE AIEMGSTNVRIGSTIFGPREYPKKE
Sbjct: 184 NFRRLLNCRIEVCKALGMAEEQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPKKE 243

Query: 270 AN 265
            N
Sbjct: 244 QN 245


>emb|CAN80917.1| hypothetical protein VITISV_024616 [Vitis vinifera]
          Length = 245

 Score =  402 bits (1033), Expect = e-110
 Identities = 199/242 (82%), Positives = 219/242 (90%)
 Frame = -3

Query: 990 PKMESTAITSLRSVMQRVKQSAEKSGRASNQVRVVAVSKTKPVSIINQVYQIGHRCFGEN 811
           P +E  A+T+LRS M RV+Q+AE+SGR S+QVRVVAVSKTKPVS+I QVY  GHRCFGEN
Sbjct: 4   PAVEGLAVTALRSAMLRVRQAAERSGRRSDQVRVVAVSKTKPVSLIRQVYDAGHRCFGEN 63

Query: 810 YVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAVPNLAMVESVDDEKIANRLDRVVAS 631
           YVQEI EKAPQLP+D+EWHFIG+LQSNKVKPLLAAVPNLAMVE VD+EKIAN+LDRVV+ 
Sbjct: 64  YVQEINEKAPQLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRVVSG 123

Query: 630 IGRKPLRVLVQVNTSGEESKSGVDPSGCVELAKHVKLGCPNLEFSGLMTIGMLDYTSTPE 451
           I RKPL+VLVQVNTSGE SKSGV+PSGCVELAKHVKLGCPNLEFSGLMTIGM DY+STPE
Sbjct: 124 IRRKPLKVLVQVNTSGEVSKSGVEPSGCVELAKHVKLGCPNLEFSGLMTIGMPDYSSTPE 183

Query: 450 NFKTLSRCRTEVCQALGITEEQCELSMGMSADFELAIEMGSTNVRIGSTIFGPREYPKKE 271
           NF+ L  CR EVC+ALG+ EEQCELSMGMS DFE AIEMGSTNVRIGSTIFGPREYPKKE
Sbjct: 184 NFRRLLNCRIEVCKALGMAEEQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYPKKE 243

Query: 270 AN 265
            N
Sbjct: 244 QN 245


>ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed bacterial homolog
            protein-like [Vitis vinifera]
          Length = 264

 Score =  400 bits (1027), Expect = e-109
 Identities = 194/245 (79%), Positives = 221/245 (90%)
 Frame = -3

Query: 1005 ASSSIPKMESTAITSLRSVMQRVKQSAEKSGRASNQVRVVAVSKTKPVSIINQVYQIGHR 826
            +S +   M+  A  +LRSV+ RV+Q+AE+SGR  +Q+RVVAVSKTK VS+I +VY  GHR
Sbjct: 18   SSMAASAMDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSVSLIREVYDSGHR 77

Query: 825  CFGENYVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAVPNLAMVESVDDEKIANRLD 646
            CFGENYVQEIIEKAPQLP+D+EWHFIGNLQSNKVKPLL  VPNLA+VE+VDDEKIA+RLD
Sbjct: 78   CFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKIADRLD 137

Query: 645  RVVASIGRKPLRVLVQVNTSGEESKSGVDPSGCVELAKHVKLGCPNLEFSGLMTIGMLDY 466
            R+VA+IGRKPL+V+VQVNTSGEESKSGVDP+ CVEL KHV LGCPNLEF GLMTIGMLDY
Sbjct: 138  RMVATIGRKPLKVMVQVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTIGMLDY 197

Query: 465  TSTPENFKTLSRCRTEVCQALGITEEQCELSMGMSADFELAIEMGSTNVRIGSTIFGPRE 286
            TSTPENFKTL+ CR+EVC++LGITEEQCELSMGMS DFELAIEMGSTNVRIGSTIFG RE
Sbjct: 198  TSTPENFKTLANCRSEVCKSLGITEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGARE 257

Query: 285  YPKKE 271
            YPKK+
Sbjct: 258  YPKKQ 262


>emb|CBI23205.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  400 bits (1027), Expect = e-109
 Identities = 194/245 (79%), Positives = 221/245 (90%)
 Frame = -3

Query: 1005 ASSSIPKMESTAITSLRSVMQRVKQSAEKSGRASNQVRVVAVSKTKPVSIINQVYQIGHR 826
            +S +   M+  A  +LRSV+ RV+Q+AE+SGR  +Q+RVVAVSKTK VS+I +VY  GHR
Sbjct: 65   SSMAASAMDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSVSLIREVYDSGHR 124

Query: 825  CFGENYVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAVPNLAMVESVDDEKIANRLD 646
            CFGENYVQEIIEKAPQLP+D+EWHFIGNLQSNKVKPLL  VPNLA+VE+VDDEKIA+RLD
Sbjct: 125  CFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKIADRLD 184

Query: 645  RVVASIGRKPLRVLVQVNTSGEESKSGVDPSGCVELAKHVKLGCPNLEFSGLMTIGMLDY 466
            R+VA+IGRKPL+V+VQVNTSGEESKSGVDP+ CVEL KHV LGCPNLEF GLMTIGMLDY
Sbjct: 185  RMVATIGRKPLKVMVQVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTIGMLDY 244

Query: 465  TSTPENFKTLSRCRTEVCQALGITEEQCELSMGMSADFELAIEMGSTNVRIGSTIFGPRE 286
            TSTPENFKTL+ CR+EVC++LGITEEQCELSMGMS DFELAIEMGSTNVRIGSTIFG RE
Sbjct: 245  TSTPENFKTLANCRSEVCKSLGITEEQCELSMGMSGDFELAIEMGSTNVRIGSTIFGARE 304

Query: 285  YPKKE 271
            YPKK+
Sbjct: 305  YPKKQ 309


>ref|XP_002518437.1| proline synthetase associated protein, putative [Ricinus communis]
           gi|223542282|gb|EEF43824.1| proline synthetase
           associated protein, putative [Ricinus communis]
          Length = 270

 Score =  396 bits (1017), Expect = e-108
 Identities = 191/238 (80%), Positives = 216/238 (90%)
 Frame = -3

Query: 984 MESTAITSLRSVMQRVKQSAEKSGRASNQVRVVAVSKTKPVSIINQVYQIGHRCFGENYV 805
           M   A  +LRSV+QRV+Q+AE+SGR + Q+RVVAVSKTKPVS+I+QVY  GHRCFGENYV
Sbjct: 33  MNGVAAAALRSVLQRVQQAAERSGRGAQQIRVVAVSKTKPVSLIHQVYDAGHRCFGENYV 92

Query: 804 QEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAVPNLAMVESVDDEKIANRLDRVVASIG 625
           QE++EKAPQLP+D+EWHFIGNLQSNKVKPLLAAVPNLA+VESVDD+KIAN LDR V ++G
Sbjct: 93  QELVEKAPQLPEDIEWHFIGNLQSNKVKPLLAAVPNLAVVESVDDQKIANHLDRAVGNLG 152

Query: 624 RKPLRVLVQVNTSGEESKSGVDPSGCVELAKHVKLGCPNLEFSGLMTIGMLDYTSTPENF 445
           RKPL+VLVQVNTSGEESK GV+P+GCVELAKHV   CPNLEF GLMTIGMLDY+STPENF
Sbjct: 153 RKPLKVLVQVNTSGEESKYGVEPAGCVELAKHVTQSCPNLEFCGLMTIGMLDYSSTPENF 212

Query: 444 KTLSRCRTEVCQALGITEEQCELSMGMSADFELAIEMGSTNVRIGSTIFGPREYPKKE 271
           KTL+ CR+EVC+ LGI EEQCELSMGMS DFE AIEMGSTNVRIGSTIFGPREYPKK+
Sbjct: 213 KTLANCRSEVCKTLGIPEEQCELSMGMSNDFEQAIEMGSTNVRIGSTIFGPREYPKKK 270


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