BLASTX nr result

ID: Coptis24_contig00022776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022776
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528979.1| PREDICTED: Down syndrome critical region pro...   152   3e-35
ref|XP_003534139.1| PREDICTED: Down syndrome critical region pro...   152   4e-35
ref|XP_002278791.1| PREDICTED: Down syndrome critical region pro...   147   9e-34
emb|CBI15584.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>ref|XP_003528979.1| PREDICTED: Down syndrome critical region protein 3 homolog [Glycine
           max]
          Length = 316

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/117 (63%), Positives = 94/117 (80%)
 Frame = -1

Query: 351 MAIQLKLNRSSRIYSPSEPLQGKIIAKFTSPISHQGIRITATGTVNLQVRGGSAGVIESI 172
           M+++LKL+RS+RIY PSE L+GKII K  S ISH GIR+T  G+VNLQVRGGSAGV+ES 
Sbjct: 1   MSVELKLSRSNRIYRPSEALEGKIIVKTQSSISHYGIRLTVKGSVNLQVRGGSAGVVESF 60

Query: 171 VGVLKPLRILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISIQ 1
            GV+KP+ I+  +IEV+S GK+ SGT+EIPF++ L +     ER+YETFHGANISIQ
Sbjct: 61  YGVIKPIPIVNRTIEVKSSGKIGSGTSEIPFSVNLRQRDENLERFYETFHGANISIQ 117


>ref|XP_003534139.1| PREDICTED: Down syndrome critical region protein 3 homolog [Glycine
           max]
          Length = 316

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/117 (62%), Positives = 94/117 (80%)
 Frame = -1

Query: 351 MAIQLKLNRSSRIYSPSEPLQGKIIAKFTSPISHQGIRITATGTVNLQVRGGSAGVIESI 172
           M+++LKL+RS+RIY PSE L+GKI+ K  S ISH GIR+T  G+VNLQVRGGSAGV+ES 
Sbjct: 1   MSVELKLSRSNRIYRPSEALEGKIVVKTQSSISHYGIRLTVKGSVNLQVRGGSAGVVESF 60

Query: 171 VGVLKPLRILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISIQ 1
            GV+KP+ I+  +IEV+S GK+ SGT+EIPF++ L +     ER+YETFHGANISIQ
Sbjct: 61  YGVIKPIPIVNRTIEVKSSGKIGSGTSEIPFSVNLRQRDENLERFYETFHGANISIQ 117


>ref|XP_002278791.1| PREDICTED: Down syndrome critical region protein 3 homolog [Vitis
           vinifera]
          Length = 314

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/117 (62%), Positives = 94/117 (80%)
 Frame = -1

Query: 351 MAIQLKLNRSSRIYSPSEPLQGKIIAKFTSPISHQGIRITATGTVNLQVRGGSAGVIESI 172
           M+I++KL R +RIY P+EPL+GKII K  S ISH GIR+T  G+VN QVRGGSAG IE++
Sbjct: 1   MSIEIKLFRPNRIYFPAEPLEGKIILKSPSSISHYGIRLTLDGSVNRQVRGGSAGAIEAL 60

Query: 171 VGVLKPLRILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISIQ 1
            G +KP+RI+ +S+E+R  GK+ SGTTEIPF++IL   Q G +R+YETFHGANISIQ
Sbjct: 61  YGAVKPIRIVNKSVEIRPAGKIGSGTTEIPFSVILR--QQGDDRFYETFHGANISIQ 115


>emb|CBI15584.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/117 (62%), Positives = 94/117 (80%)
 Frame = -1

Query: 351 MAIQLKLNRSSRIYSPSEPLQGKIIAKFTSPISHQGIRITATGTVNLQVRGGSAGVIESI 172
           M+I++KL R +RIY P+EPL+GKII K  S ISH GIR+T  G+VN QVRGGSAG IE++
Sbjct: 1   MSIEIKLFRPNRIYFPAEPLEGKIILKSPSSISHYGIRLTLDGSVNRQVRGGSAGAIEAL 60

Query: 171 VGVLKPLRILKESIEVRSPGKLSSGTTEIPFALILTEGQAGFERYYETFHGANISIQ 1
            G +KP+RI+ +S+E+R  GK+ SGTTEIPF++IL   Q G +R+YETFHGANISIQ
Sbjct: 61  YGAVKPIRIVNKSVEIRPAGKIGSGTTEIPFSVILR--QQGDDRFYETFHGANISIQ 115


>ref|XP_002321517.1| predicted protein [Populus trichocarpa] gi|222868513|gb|EEF05644.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/116 (59%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
 Frame = -1

Query: 345 IQLKLNRSSRIYSPSEPLQGKIIAKFTSPISHQGIRITATGTVNLQVRGGSAGVIESIVG 166
           I LK +RS+RIY PSEP++GKI+ K  S ISH GIR++  G+VNLQVRGGSAGVIE+  G
Sbjct: 5   IALKFSRSNRIYRPSEPVEGKIVIKSPSSISHYGIRLSVNGSVNLQVRGGSAGVIETFYG 64

Query: 165 VLKPLRILKESIEVRSPGKLSSGTTEIPFALILTE-GQAGFERYYETFHGANISIQ 1
           V+KP+ I+ +SIEV+  GK+ SGTTE+PF ++L + G+   ER+YETFHG ++SIQ
Sbjct: 65  VVKPITIVNKSIEVKPSGKIGSGTTEVPFTMVLKQNGEKSLERFYETFHGTDVSIQ 120


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