BLASTX nr result

ID: Coptis24_contig00022622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022622
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569452.1| PREDICTED: uncharacterized protein LOC100830...    55   6e-06
ref|XP_003543667.1| PREDICTED: uncharacterized protein LOC100778...    55   6e-06
ref|XP_003543666.1| PREDICTED: uncharacterized protein LOC100778...    55   6e-06

>ref|XP_003569452.1| PREDICTED: uncharacterized protein LOC100830426 [Brachypodium
           distachyon]
          Length = 650

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +1

Query: 184 GGKGNLERVKRFIRTVFFMLTMVASLLILSAPVIVAIGDIMV 309
           GGKG LE  +R +RT +FM+ MVASLL+ SAPV+VA GD+ V
Sbjct: 4   GGKGWLETARRGVRTAWFMVVMVASLLVASAPVVVAAGDVAV 45


>ref|XP_003543667.1| PREDICTED: uncharacterized protein LOC100778891 isoform 2 [Glycine
           max]
          Length = 646

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/48 (54%), Positives = 40/48 (83%)
 Frame = +1

Query: 169 IMASGGGKGNLERVKRFIRTVFFMLTMVASLLILSAPVIVAIGDIMVP 312
           +MA+ GG+  LE+++RF+RTVFF+  +VASLL+ S PV+VA+ D++VP
Sbjct: 1   MMAARGGQC-LEKLRRFVRTVFFVAALVASLLVTSLPVLVAVVDVLVP 47


>ref|XP_003543666.1| PREDICTED: uncharacterized protein LOC100778891 isoform 1 [Glycine
           max]
          Length = 646

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/48 (54%), Positives = 40/48 (83%)
 Frame = +1

Query: 169 IMASGGGKGNLERVKRFIRTVFFMLTMVASLLILSAPVIVAIGDIMVP 312
           +MA+ GG+  LE+++RF+RTVFF+  +VASLL+ S PV+VA+ D++VP
Sbjct: 1   MMAARGGQC-LEKLRRFVRTVFFVAALVASLLVTSLPVLVAVVDVLVP 47


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