BLASTX nr result

ID: Coptis24_contig00022616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022616
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Viti...   218   1e-54
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   204   2e-50
gb|ADL36690.1| GATA domain class transcription factor [Malus x d...   202   1e-49
ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like...   187   3e-45
ref|XP_003545608.1| PREDICTED: GATA transcription factor 12-like...   181   2e-43

>ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
           gi|147811360|emb|CAN61228.1| hypothetical protein
           VITISV_004677 [Vitis vinifera]
          Length = 342

 Score =  218 bits (556), Expect = 1e-54
 Identities = 128/250 (51%), Positives = 145/250 (58%), Gaps = 3/250 (1%)
 Frame = +1

Query: 97  MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPG--DHFIIEDLLDFSNEDIAIGDGT 270
           MEAPEFFQ  +  +      SQ+  EKR S DTKPG  DHFIIEDLLDFSN+D  I DGT
Sbjct: 1   MEAPEFFQGGFCIAPA----SQFGTEKRIS-DTKPGGGDHFIIEDLLDFSNDDAVITDGT 55

Query: 271 FDNITGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMACHSLPDAQFSGELCVPYDDLAELE 450
           FD +TG                  SG EP F GD+   +  DA FS +LCVPYDDLAELE
Sbjct: 56  FDTVTGTSTDSSTFTIVDSCNSV-SGCEPQFAGDIGSRNYTDAHFSSDLCVPYDDLAELE 114

Query: 451 WLSNFVEDSFSSDDLQKLQLISGMKARTNEVSETHDYQPENNRSNPIFSPDVSVPGKARS 630
           WLSN VE+SFSS+DL+KLQLISGMKA T E SET D+QPENN++ P+   D   P KARS
Sbjct: 115 WLSNIVEESFSSEDLEKLQLISGMKANTEEASETRDFQPENNQNPPLSLRD--FPAKARS 172

Query: 631 KRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXCXXXXXXXXXXXEVADSGTGN-SDGRK 807
           KR+RA PC W                                   E  +   G  SDGRK
Sbjct: 173 KRARAMPCKWTSRLLALSPTSSLSETDIIPPNSGKKSTKSAPKKKESPEVVAGGCSDGRK 232

Query: 808 CLHCATDKTP 837
           CLHCATDKTP
Sbjct: 233 CLHCATDKTP 242


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  204 bits (519), Expect = 2e-50
 Identities = 114/249 (45%), Positives = 144/249 (57%), Gaps = 2/249 (0%)
 Frame = +1

Query: 97  MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPGDHFIIEDLLDFSNEDIAIGDGTFD 276
           MEA  FF   Y S+  +    +++ EKR   + KPGDHF++EDLLDF N+D  + DG FD
Sbjct: 1   MEASSFFPGGYYSAGAD----EFSQEKR---EQKPGDHFLVEDLLDFPNDDDIMTDGFFD 53

Query: 277 NITGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMACHSLPDAQFSGELCVPYDDLAELEWL 456
            +TG                  SG+EPHF+GD+ C +  DAQFSGELCVP D+LAELEWL
Sbjct: 54  TVTGNSTDSSTVTVVDSCNSSLSGNEPHFSGDVGCRNFTDAQFSGELCVPCDELAELEWL 113

Query: 457 SNFVEDSFSSDDLQKLQLISGMKA--RTNEVSETHDYQPENNRSNPIFSPDVSVPGKARS 630
           SNFVE+SFSS+DL K+Q++SG+KA   T E  E   +QPE  RS PI  P ++VPGKARS
Sbjct: 114 SNFVEESFSSEDLHKIQVLSGIKAPLHTTESPEP-QFQPETARSEPILQPPMNVPGKARS 172

Query: 631 KRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXCXXXXXXXXXXXEVADSGTGNSDGRKC 810
           KR R+ PC+W+                                  E +DS     DGRKC
Sbjct: 173 KRPRSVPCDWSTRLLVLSPATSSSESDAFK----KPPKTTSSKKKENSDSA---GDGRKC 225

Query: 811 LHCATDKTP 837
           LHCA +KTP
Sbjct: 226 LHCAAEKTP 234


>gb|ADL36690.1| GATA domain class transcription factor [Malus x domestica]
          Length = 375

 Score =  202 bits (513), Expect = 1e-49
 Identities = 127/280 (45%), Positives = 151/280 (53%), Gaps = 33/280 (11%)
 Frame = +1

Query: 97  MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKP--------GDHFIIEDLLDFSNEDI 252
           MEAPE+++ T+          Q+TPEKRHS D+          GDHF++EDLLDFSNED 
Sbjct: 1   MEAPEYYKKTFCP--------QFTPEKRHSFDSSNNKTAIGGGGDHFMVEDLLDFSNEDD 52

Query: 253 A-IGDG----TFDNITGXXXXXXXXXXXXXXXXX-YSGSEPHFTGDMACHSLPDAQFSGE 414
           A I DG     FDN+ G                  +SGSEP+F       +L D  FS +
Sbjct: 53  AVITDGGCPAAFDNVIGNSTDSSPLNVIDSCNSSSFSGSEPNF----GSRNLADGPFSSD 108

Query: 415 LCVPYDDLAELEWLSNFVEDSFSSDDLQKLQLISGMKARTNEVS-ETHDYQPE------- 570
           LCVP DDLAELEWLSNFVE+SFSS+DLQKLQLISGMK R ++ + ET  +QP+       
Sbjct: 109 LCVPCDDLAELEWLSNFVEESFSSEDLQKLQLISGMKPRPDQAAFETRQFQPDPTRTNNN 168

Query: 571 -NNRSNPIFSPDVSVPGKARSKRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXCXXXXX 747
            N  +NPIF+P+VSVP KARSKRSRAAPCNW                             
Sbjct: 169 PNGNNNPIFNPEVSVPAKARSKRSRAAPCNWTSRLLLLSTPEQSDVVVSAAEAASPLPPP 228

Query: 748 XXXXXXEVAD----------SGTGNSDGRKCLHCATDKTP 837
                  V            SG G  DGRKC+HCATDKTP
Sbjct: 229 SSTGKKTVKSAPKKKESQEGSGGGPGDGRKCMHCATDKTP 268


>ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 366

 Score =  187 bits (474), Expect = 3e-45
 Identities = 103/239 (43%), Positives = 127/239 (53%), Gaps = 23/239 (9%)
 Frame = +1

Query: 190 DTKPGDHFIIEDLLDFSNEDIAIGDGTFDNITGXXXXXXXXXXXXXXXXXYSGSEPHFTG 369
           D    DHFI+EDLLDFSN+D+ I D TFD+IT                  +SGS+P+   
Sbjct: 16  DNNNSDHFIVEDLLDFSNDDVVITDATFDSIT-TDSSTVTTTVHSCNSSSFSGSDPNTVP 74

Query: 370 DMACHSLPDAQFSGELCVPYDDLAELEWLSNFVEDSFSSDDLQKLQLISGMKARTNEVSE 549
           D+   +L D  FS +LCVPYDD+AELEWLSNFVE+SFSS+DL K+QLISGM A+ N+VSE
Sbjct: 75  DIGSRNLSDGHFSDDLCVPYDDIAELEWLSNFVEESFSSEDLHKMQLISGMNAQNNDVSE 134

Query: 550 THDYQ------------PENNRSNPIFSPDVSVPGKARSKRSRAAPCNWAXXXXXXXXXX 693
             ++             PE  R++PIF+ +VSVP KARSKRSR  PCNWA          
Sbjct: 135 AREFHYEPTTTRSGSHTPEPTRNSPIFNSEVSVPAKARSKRSRGPPCNWASRLLVLSPTS 194

Query: 694 XXXXXXXXXXXXC-----------XXXXXXXXXXXEVADSGTGNSDGRKCLHCATDKTP 837
                                                +D      DGR+CLHCATDKTP
Sbjct: 195 SSSDNEVVVPSPATAEPCPTPAKKMAKVGPRKKDSSSSDGNGSGGDGRRCLHCATDKTP 253


>ref|XP_003545608.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 383

 Score =  181 bits (459), Expect = 2e-43
 Identities = 114/276 (41%), Positives = 144/276 (52%), Gaps = 31/276 (11%)
 Frame = +1

Query: 103 APEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPGDHFIIEDLLDFSNEDIAIGDGTFDNI 282
           +P F Q T++++  N N                 D+FI+EDLLDFSN+D+ I D TFD+I
Sbjct: 7   SPIFPQFTFDTNKNNNNP----------------DNFIVEDLLDFSNDDVVITDATFDSI 50

Query: 283 TGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMACHSLPDAQFSGELCVPYDDLAELEWLSN 462
           T                  +SGS+P+   D+   +L D  FSG+LCVPYDD+AELEWLSN
Sbjct: 51  T-TDSSTVTTVVDSCNSSSFSGSDPNTVPDVGSQNLSDGHFSGDLCVPYDDIAELEWLSN 109

Query: 463 FVEDSFSSDDLQKLQLISGMKARTNEVSETHD--YQP--------------------ENN 576
           FVE+SFSS+DLQ++QLISGM AR  +VSE  +  Y+P                    E  
Sbjct: 110 FVEESFSSEDLQQMQLISGMNARNYDVSEAREFHYEPTTRSGPHTPEPTTKSGGLHYEPT 169

Query: 577 RSNPIFSPDVSVPGKARSKRSRAAPCNWAXXXXXXXXXXXXXXXXXXXXXXCXXXXXXXX 756
           R++PIF+ +VSVP KARSKRSR  PCNWA                               
Sbjct: 170 RNSPIFNSEVSVPAKARSKRSRGPPCNWASRLLVLSPTTSSSSDSEVTVPAPAEHGPAPA 229

Query: 757 XXXEVA-----DSGT-GN---SDGRKCLHCATDKTP 837
                A     DSG+ GN    DGR+CLHCATDKTP
Sbjct: 230 KKAAKAGPRKKDSGSDGNGSGGDGRRCLHCATDKTP 265


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