BLASTX nr result

ID: Coptis24_contig00022578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022578
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262...   147   1e-33
ref|XP_003603503.1| Leucine-rich repeat-containing protein [Medi...   139   2e-31
ref|XP_003526444.1| PREDICTED: uncharacterized protein LOC100813...   133   2e-29
ref|NP_001189602.1| uncharacterized protein [Arabidopsis thalian...   125   4e-27
ref|NP_001043457.2| Os01g0593000 [Oryza sativa Japonica Group] g...   119   3e-25

>ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262933 [Vitis vinifera]
          Length = 2871

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/106 (67%), Positives = 84/106 (79%)
 Frame = +2

Query: 5    EEASNVXXXXXXXXXXXAVMGWDLLSGKTVPRKKMMQLLWTSKSQVLRLEEYSFYGKQSD 184
            +EASNV           AVMGWDLL+GKT  R+K+MQLLWTSKSQ+LRLEE S YG QSD
Sbjct: 783  QEASNVLTLFPRLQPLVAVMGWDLLAGKTAERRKLMQLLWTSKSQILRLEEPSLYGNQSD 842

Query: 185  EMSCVEHLCDTLCYHLDLSSFVAHVNSGLSWDSKSSILLSVKEQHA 322
            E+SC+EHLCD+LCY LDL+SFVA VNSG SW+SKSS+LLS +E  A
Sbjct: 843  EVSCIEHLCDSLCYQLDLASFVACVNSGQSWNSKSSLLLSGRETMA 888


>ref|XP_003603503.1| Leucine-rich repeat-containing protein [Medicago truncatula]
           gi|355492551|gb|AES73754.1| Leucine-rich
           repeat-containing protein [Medicago truncatula]
          Length = 2295

 Score =  139 bits (351), Expect = 2e-31
 Identities = 70/106 (66%), Positives = 80/106 (75%)
 Frame = +2

Query: 5   EEASNVXXXXXXXXXXXAVMGWDLLSGKTVPRKKMMQLLWTSKSQVLRLEEYSFYGKQSD 184
           EEAS+V           A MGWDLL+GK   R+K+MQLLWTSKSQV+RLEE S YG +SD
Sbjct: 423 EEASSVLQLFPQLQPLVAAMGWDLLAGKIAARRKLMQLLWTSKSQVIRLEESSLYGNKSD 482

Query: 185 EMSCVEHLCDTLCYHLDLSSFVAHVNSGLSWDSKSSILLSVKEQHA 322
           EMSCVEHLCDTLCY LDL+SFVA VNSG SW+SK S++   KEQ A
Sbjct: 483 EMSCVEHLCDTLCYQLDLASFVACVNSGQSWNSKLSLVRPGKEQVA 528


>ref|XP_003526444.1| PREDICTED: uncharacterized protein LOC100813647 [Glycine max]
          Length = 2475

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/102 (63%), Positives = 76/102 (74%)
 Frame = +2

Query: 11  ASNVXXXXXXXXXXXAVMGWDLLSGKTVPRKKMMQLLWTSKSQVLRLEEYSFYGKQSDEM 190
           A NV           A MGWD L+GK   R+K+MQLLWTSKSQV+RLEE S YG ++DEM
Sbjct: 394 AGNVLQLFPLLQPLVATMGWDFLAGKIAARRKLMQLLWTSKSQVIRLEESSPYGNKTDEM 453

Query: 191 SCVEHLCDTLCYHLDLSSFVAHVNSGLSWDSKSSILLSVKEQ 316
           +CVEHLCDTLCY LDL+SFVA VNSG  W+SK S++LS KEQ
Sbjct: 454 TCVEHLCDTLCYQLDLASFVACVNSGQPWNSKFSLMLSGKEQ 495


>ref|NP_001189602.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330252650|gb|AEC07744.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 2487

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/109 (57%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
 Frame = +2

Query: 5   EEASNVXXXXXXXXXXXAVMGWDLLSGKTVPRKKMMQLLWTSKSQVLRLEEYSFYGKQSD 184
           +EA++V           A MGWDLL GKT  R+K+M+LLWTS SQ LRLEE S YG Q+D
Sbjct: 413 QEANDVLTLFPRLRPLVASMGWDLLPGKTATRRKLMRLLWTSDSQALRLEESSLYGNQTD 472

Query: 185 EMSCVEHLCDTLCYHLDLSSFVAHVNSGLSWDSKSSILL--SVKEQHAD 325
           E SCVEHLCDTLCY L+L+SF A VNSG SW  K+S L+  +V   H D
Sbjct: 473 EKSCVEHLCDTLCYQLELASFAACVNSGKSWTPKASFLMHGNVSSAHDD 521


>ref|NP_001043457.2| Os01g0593000 [Oryza sativa Japonica Group]
           gi|255673417|dbj|BAF05371.2| Os01g0593000 [Oryza sativa
           Japonica Group]
          Length = 2485

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/107 (49%), Positives = 75/107 (70%)
 Frame = +2

Query: 5   EEASNVXXXXXXXXXXXAVMGWDLLSGKTVPRKKMMQLLWTSKSQVLRLEEYSFYGKQSD 184
           +EA+N            AV+GWD+L GKT  R+K++QL WTSKSQ LRL+EY  Y  ++D
Sbjct: 374 QEAANAISMFPLLQPLVAVLGWDILKGKTALRRKLLQLFWTSKSQALRLQEYPHYRTETD 433

Query: 185 EMSCVEHLCDTLCYHLDLSSFVAHVNSGLSWDSKSSILLSVKEQHAD 325
           E SC E+LCD LC+HLD++ FV+ VNSG  W+ ++S+L + +EQ +D
Sbjct: 434 ETSCEEYLCDLLCFHLDVACFVSSVNSGRQWNLRNSLLFTQQEQDSD 480


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