BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00022543
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-lik...   110   9e-23
ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago trun...   110   9e-23
ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi...   110   1e-22
ref|XP_003527915.1| PREDICTED: tRNA modification GTPase MnmE-lik...   109   2e-22
ref|XP_002301037.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22

>ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 520

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/66 (83%), Positives = 58/66 (87%)
 Frame = +2

Query: 2   ARLDFDDEMPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSL 181
           ARLDFDDEMP LD + +MD IH M  +VE ALETANYDKLLQSGLQIAIVGRPNVGKSSL
Sbjct: 229 ARLDFDDEMPPLDLNLIMDKIHNMSREVENALETANYDKLLQSGLQIAIVGRPNVGKSSL 288

Query: 182 LNAWSK 199
           LNAWSK
Sbjct: 289 LNAWSK 294


>ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago truncatula]
           gi|355504724|gb|AES85927.1| tRNA modification GTPase
           mnmE [Medicago truncatula]
          Length = 543

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/66 (83%), Positives = 58/66 (87%)
 Frame = +2

Query: 2   ARLDFDDEMPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSL 181
           ARLDF+DEMP LD + +MD IH M  DVE ALETANYDKLLQSGLQIAIVGRPNVGKSSL
Sbjct: 251 ARLDFEDEMPPLDLNGIMDKIHHMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSL 310

Query: 182 LNAWSK 199
           LNAWSK
Sbjct: 311 LNAWSK 316


>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
           gi|302141924|emb|CBI19127.3| unnamed protein product
           [Vitis vinifera]
          Length = 571

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/66 (81%), Positives = 58/66 (87%)
 Frame = +2

Query: 2   ARLDFDDEMPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSL 181
           ARLDFDDEMP LD + +MD IH M  DVE ALETANYD+LLQSGLQIAI+GRPNVGKSSL
Sbjct: 282 ARLDFDDEMPPLDLNLIMDKIHSMSQDVENALETANYDQLLQSGLQIAIIGRPNVGKSSL 341

Query: 182 LNAWSK 199
           LNAWSK
Sbjct: 342 LNAWSK 347


>ref|XP_003527915.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 548

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/66 (83%), Positives = 57/66 (86%)
 Frame = +2

Query: 2   ARLDFDDEMPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSL 181
           ARLDFDDEMP LD +  MD IH M  +VE ALETANYDKLLQSGLQIAIVGRPNVGKSSL
Sbjct: 257 ARLDFDDEMPPLDLNLTMDKIHNMSREVENALETANYDKLLQSGLQIAIVGRPNVGKSSL 316

Query: 182 LNAWSK 199
           LNAWSK
Sbjct: 317 LNAWSK 322


>ref|XP_002301037.1| predicted protein [Populus trichocarpa] gi|222842763|gb|EEE80310.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/66 (81%), Positives = 58/66 (87%)
 Frame = +2

Query: 2   ARLDFDDEMPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSL 181
           ARLDFDDEMP LD + +MD IH M  +VE AL+TANYDKLLQSGLQIAIVGRPNVGKSSL
Sbjct: 193 ARLDFDDEMPPLDLNLIMDKIHSMSENVENALKTANYDKLLQSGLQIAIVGRPNVGKSSL 252

Query: 182 LNAWSK 199
           LNAWSK
Sbjct: 253 LNAWSK 258